Classical swine fever virus in South-Eastern Europe—Retrospective analysis of the disease situation and molecular epidemiology
Classical swine fever (CSF) is among the most important diseases of domestic pigs and causes great socio-economic losses. Therefore, control of CSF is given high priority within the European Union, including financial support of concerted control actions in candidate and in potential candidate count...
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description | Classical swine fever (CSF) is among the most important diseases of domestic pigs and causes great socio-economic losses. Therefore, control of CSF is given high priority within the European Union, including financial support of concerted control actions in candidate and in potential candidate countries. Unfortunately, from some of these countries information on the CSF situation and related data is very limited. This study was undertaken to gather all available information on the domestic pig population and husbandry, and of the CSF situation in domestic pigs and wild boar in South-Eastern European countries that have recently joined or are applying to join the European Union. A characteristic feature of pig production in Eastern Europe is that most of them are in backyard holdings. Although mandatory vaccination is carried out in most of these countries, sporadic CSF outbreaks still occur. Little is still known about the CSF situation in wild boar. In addition, molecular epidemiology of 97 CSF virus isolates available from these countries, from outbreaks that occurred between 1994 and 2007, was performed. Most of the isolates were from Romania and Bulgaria. Genetic typing showed that almost all isolates (with exception of Croatian and of the Macedonian isolates) belonged to genotype 2.3. On the basis of these sequences, and additional sequences from outbreaks in Eastern and Western European countries taken from the database held at the European Union Reference Laboratory (EURL), two clusters could be distinguished within subtype 2.3. They were tentatively named 2.3.1 and 2.3.2. |
doi_str_mv | 10.1016/j.vetmic.2010.05.035 |
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Therefore, control of CSF is given high priority within the European Union, including financial support of concerted control actions in candidate and in potential candidate countries. Unfortunately, from some of these countries information on the CSF situation and related data is very limited. This study was undertaken to gather all available information on the domestic pig population and husbandry, and of the CSF situation in domestic pigs and wild boar in South-Eastern European countries that have recently joined or are applying to join the European Union. A characteristic feature of pig production in Eastern Europe is that most of them are in backyard holdings. Although mandatory vaccination is carried out in most of these countries, sporadic CSF outbreaks still occur. Little is still known about the CSF situation in wild boar. In addition, molecular epidemiology of 97 CSF virus isolates available from these countries, from outbreaks that occurred between 1994 and 2007, was performed. Most of the isolates were from Romania and Bulgaria. Genetic typing showed that almost all isolates (with exception of Croatian and of the Macedonian isolates) belonged to genotype 2.3. On the basis of these sequences, and additional sequences from outbreaks in Eastern and Western European countries taken from the database held at the European Union Reference Laboratory (EURL), two clusters could be distinguished within subtype 2.3. They were tentatively named 2.3.1 and 2.3.2.</description><identifier>ISSN: 0378-1135</identifier><identifier>EISSN: 1873-2542</identifier><identifier>DOI: 10.1016/j.vetmic.2010.05.035</identifier><identifier>PMID: 20541876</identifier><identifier>CODEN: VMICDQ</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>animal housing ; animal husbandry ; Animals ; backyard animal husbandry ; Biological and medical sciences ; Classical Swine Fever - epidemiology ; Classical Swine Fever - virology ; Classical swine fever virus ; Classical swine fever virus - classification ; Classical swine fever virus - genetics ; Classical swine fever virus - isolation & purification ; data analysis ; disease incidence ; disease outbreaks ; disease prevalence ; Disease situation ; Europe, Eastern - epidemiology ; Fundamental and applied biological sciences. Psychology ; Genotype ; hog cholera ; hosts ; microbial genetics ; Microbiology ; Miscellaneous ; Molecular Epidemiology ; molecular sequence data ; nucleotide sequences ; Phylogeny ; Retrospective Studies ; sequence analysis ; Sequence Homology, Nucleic Acid ; South-Eastern Europe ; Swine ; temporal variation ; vaccination ; Viral Proteins - genetics ; Virology ; wild boars</subject><ispartof>Veterinary microbiology, 2010-12, Vol.146 (3), p.276-284</ispartof><rights>2010 Elsevier B.V.</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2010 Elsevier B.V. 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Therefore, control of CSF is given high priority within the European Union, including financial support of concerted control actions in candidate and in potential candidate countries. Unfortunately, from some of these countries information on the CSF situation and related data is very limited. This study was undertaken to gather all available information on the domestic pig population and husbandry, and of the CSF situation in domestic pigs and wild boar in South-Eastern European countries that have recently joined or are applying to join the European Union. A characteristic feature of pig production in Eastern Europe is that most of them are in backyard holdings. Although mandatory vaccination is carried out in most of these countries, sporadic CSF outbreaks still occur. Little is still known about the CSF situation in wild boar. In addition, molecular epidemiology of 97 CSF virus isolates available from these countries, from outbreaks that occurred between 1994 and 2007, was performed. Most of the isolates were from Romania and Bulgaria. Genetic typing showed that almost all isolates (with exception of Croatian and of the Macedonian isolates) belonged to genotype 2.3. On the basis of these sequences, and additional sequences from outbreaks in Eastern and Western European countries taken from the database held at the European Union Reference Laboratory (EURL), two clusters could be distinguished within subtype 2.3. They were tentatively named 2.3.1 and 2.3.2.</description><subject>animal housing</subject><subject>animal husbandry</subject><subject>Animals</subject><subject>backyard animal husbandry</subject><subject>Biological and medical sciences</subject><subject>Classical Swine Fever - epidemiology</subject><subject>Classical Swine Fever - virology</subject><subject>Classical swine fever virus</subject><subject>Classical swine fever virus - classification</subject><subject>Classical swine fever virus - genetics</subject><subject>Classical swine fever virus - isolation & purification</subject><subject>data analysis</subject><subject>disease incidence</subject><subject>disease outbreaks</subject><subject>disease prevalence</subject><subject>Disease situation</subject><subject>Europe, Eastern - epidemiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genotype</subject><subject>hog cholera</subject><subject>hosts</subject><subject>microbial genetics</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Epidemiology</subject><subject>molecular sequence data</subject><subject>nucleotide sequences</subject><subject>Phylogeny</subject><subject>Retrospective Studies</subject><subject>sequence analysis</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>South-Eastern Europe</subject><subject>Swine</subject><subject>temporal variation</subject><subject>vaccination</subject><subject>Viral Proteins - genetics</subject><subject>Virology</subject><subject>wild boars</subject><issn>0378-1135</issn><issn>1873-2542</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0ctu1DAUBuAIgehQeAME3iBWGXyJc9kgodFQkCohUbq2HPu49SiJg08SNLs-BE_Ik9RVBtjBypL1HR_r_7PsJaNbRln57rBdYOq92XKarqjcUiEfZRtWVyLnsuCPsw0VVZ0zJuRZ9gzxQCktmpI-zc44lUWC5Sa723Ua0RvdEfzhByAOFohk8XFG4gdyFebpNt9rnCAOZD_HMMKvu59fYYoBRzCTX4DoQXdH9EiCI9MtEOsRNAJBP8168mFIwpI-dGDmTkcCo7fQ-9CFm-Pz7InTHcKL03meXX_cf9t9yi-_XHzefbjMTVFUU865Nbq1gha1A0srAUKz1rm2KUVRtzVvmTMViNLZBsDKQtu2kY5KTg2YphHn2dv13TGG7zPgpHqPBrpODxBmVCkNXshSiP9LxpmoJKNJFqs0KQyM4NQYfa_jUTGqHkpSB7WWpB5KUlSqVFIae3VaMLc92D9Dv1tJ4M0JaEzNuKgH4_GvE2XZcMGSe706p4PSNzGZ66u0SVDWMF7XPIn3q4AU7eIhKjQeBgPWx1SessH_-6_3xoi_kw</recordid><startdate>20101215</startdate><enddate>20101215</enddate><creator>Blome, Sandra</creator><creator>Grotha, Inga</creator><creator>Moennig, Volker</creator><creator>Greiser-Wilke, Irene</creator><general>Elsevier B.V</general><general>Amsterdam; New York: Elsevier</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7U9</scope><scope>H94</scope></search><sort><creationdate>20101215</creationdate><title>Classical swine fever virus in South-Eastern Europe—Retrospective analysis of the disease situation and molecular epidemiology</title><author>Blome, Sandra ; Grotha, Inga ; Moennig, Volker ; Greiser-Wilke, Irene</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c447t-22dcabd3048fed073e3a1bffb96348b82b1fc7e36fd9eed54adb95f0520cec993</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>animal housing</topic><topic>animal husbandry</topic><topic>Animals</topic><topic>backyard animal husbandry</topic><topic>Biological and medical sciences</topic><topic>Classical Swine Fever - epidemiology</topic><topic>Classical Swine Fever - virology</topic><topic>Classical swine fever virus</topic><topic>Classical swine fever virus - classification</topic><topic>Classical swine fever virus - genetics</topic><topic>Classical swine fever virus - isolation & purification</topic><topic>data analysis</topic><topic>disease incidence</topic><topic>disease outbreaks</topic><topic>disease prevalence</topic><topic>Disease situation</topic><topic>Europe, Eastern - epidemiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genotype</topic><topic>hog cholera</topic><topic>hosts</topic><topic>microbial genetics</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Epidemiology</topic><topic>molecular sequence data</topic><topic>nucleotide sequences</topic><topic>Phylogeny</topic><topic>Retrospective Studies</topic><topic>sequence analysis</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>South-Eastern Europe</topic><topic>Swine</topic><topic>temporal variation</topic><topic>vaccination</topic><topic>Viral Proteins - genetics</topic><topic>Virology</topic><topic>wild boars</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Blome, Sandra</creatorcontrib><creatorcontrib>Grotha, Inga</creatorcontrib><creatorcontrib>Moennig, Volker</creatorcontrib><creatorcontrib>Greiser-Wilke, Irene</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Virology and AIDS Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><jtitle>Veterinary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Blome, Sandra</au><au>Grotha, Inga</au><au>Moennig, Volker</au><au>Greiser-Wilke, Irene</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Classical swine fever virus in South-Eastern Europe—Retrospective analysis of the disease situation and molecular epidemiology</atitle><jtitle>Veterinary microbiology</jtitle><addtitle>Vet Microbiol</addtitle><date>2010-12-15</date><risdate>2010</risdate><volume>146</volume><issue>3</issue><spage>276</spage><epage>284</epage><pages>276-284</pages><issn>0378-1135</issn><eissn>1873-2542</eissn><coden>VMICDQ</coden><abstract>Classical swine fever (CSF) is among the most important diseases of domestic pigs and causes great socio-economic losses. Therefore, control of CSF is given high priority within the European Union, including financial support of concerted control actions in candidate and in potential candidate countries. Unfortunately, from some of these countries information on the CSF situation and related data is very limited. This study was undertaken to gather all available information on the domestic pig population and husbandry, and of the CSF situation in domestic pigs and wild boar in South-Eastern European countries that have recently joined or are applying to join the European Union. A characteristic feature of pig production in Eastern Europe is that most of them are in backyard holdings. Although mandatory vaccination is carried out in most of these countries, sporadic CSF outbreaks still occur. Little is still known about the CSF situation in wild boar. In addition, molecular epidemiology of 97 CSF virus isolates available from these countries, from outbreaks that occurred between 1994 and 2007, was performed. Most of the isolates were from Romania and Bulgaria. Genetic typing showed that almost all isolates (with exception of Croatian and of the Macedonian isolates) belonged to genotype 2.3. On the basis of these sequences, and additional sequences from outbreaks in Eastern and Western European countries taken from the database held at the European Union Reference Laboratory (EURL), two clusters could be distinguished within subtype 2.3. They were tentatively named 2.3.1 and 2.3.2.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>20541876</pmid><doi>10.1016/j.vetmic.2010.05.035</doi><tpages>9</tpages></addata></record> |
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subjects | animal housing animal husbandry Animals backyard animal husbandry Biological and medical sciences Classical Swine Fever - epidemiology Classical Swine Fever - virology Classical swine fever virus Classical swine fever virus - classification Classical swine fever virus - genetics Classical swine fever virus - isolation & purification data analysis disease incidence disease outbreaks disease prevalence Disease situation Europe, Eastern - epidemiology Fundamental and applied biological sciences. Psychology Genotype hog cholera hosts microbial genetics Microbiology Miscellaneous Molecular Epidemiology molecular sequence data nucleotide sequences Phylogeny Retrospective Studies sequence analysis Sequence Homology, Nucleic Acid South-Eastern Europe Swine temporal variation vaccination Viral Proteins - genetics Virology wild boars |
title | Classical swine fever virus in South-Eastern Europe—Retrospective analysis of the disease situation and molecular epidemiology |
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