Competition between Hydrogen Bonding and Dispersion Interactions in the Indole···Pyridine Dimer and (Indole)2···Pyridine Trimer Studied in a Supersonic Jet
Structures of the indole···pyridine dimer and (indole)2···pyridine trimer have been investigated in a supersonic jet using resonant two-photon ionization (R2PI) and IR-UV double resonance spectroscopic techniques combined with quantum chemistry calculations. R2PI spectra of the dimer and the trimer...
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Veröffentlicht in: | The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory Molecules, spectroscopy, kinetics, environment, & general theory, 2011-07, Vol.115 (26), p.7461-7472 |
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description | Structures of the indole···pyridine dimer and (indole)2···pyridine trimer have been investigated in a supersonic jet using resonant two-photon ionization (R2PI) and IR-UV double resonance spectroscopic techniques combined with quantum chemistry calculations. R2PI spectra of the dimer and the trimer recorded by electronic excitation of the indole moiety show that the red-shift in the band origin of the dimer with respect to the 00 0 band of the monomer is larger compared to that of the trimer. The presence of only one conformer in the case of both the dimer and the trimer has been confirmed from IR-UV hole-burning spectroscopy. The structures of the dimer and the trimer have been determined from resonant ion dip infrared (RIDIR) spectra combined with ab initio as well as DFT/M05-2X and DFT/M06-2X calculations. It has been found that the dimer, observed in the experiment, has a V-shaped geometry stabilized by N–H···N and C–H···N hydrogen bonding interactions, as well as C–H···π and π···π dispersion interactions. The geometry of the trimer has been found to be a cyclic one stabilized by N–H···N, N–H···π, C–H···π, and C–H···N interactions. The most important finding of this current study is the observation of the mixed dimer and trimer, which are stabilized by hydrogen bonding as well as dispersion interactions. |
doi_str_mv | 10.1021/jp202658r |
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R2PI spectra of the dimer and the trimer recorded by electronic excitation of the indole moiety show that the red-shift in the band origin of the dimer with respect to the 00 0 band of the monomer is larger compared to that of the trimer. The presence of only one conformer in the case of both the dimer and the trimer has been confirmed from IR-UV hole-burning spectroscopy. The structures of the dimer and the trimer have been determined from resonant ion dip infrared (RIDIR) spectra combined with ab initio as well as DFT/M05-2X and DFT/M06-2X calculations. It has been found that the dimer, observed in the experiment, has a V-shaped geometry stabilized by N–H···N and C–H···N hydrogen bonding interactions, as well as C–H···π and π···π dispersion interactions. The geometry of the trimer has been found to be a cyclic one stabilized by N–H···N, N–H···π, C–H···π, and C–H···N interactions. 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A, Molecules, spectroscopy, kinetics, environment, & general theory</title><addtitle>J. Phys. Chem. A</addtitle><description>Structures of the indole···pyridine dimer and (indole)2···pyridine trimer have been investigated in a supersonic jet using resonant two-photon ionization (R2PI) and IR-UV double resonance spectroscopic techniques combined with quantum chemistry calculations. R2PI spectra of the dimer and the trimer recorded by electronic excitation of the indole moiety show that the red-shift in the band origin of the dimer with respect to the 00 0 band of the monomer is larger compared to that of the trimer. The presence of only one conformer in the case of both the dimer and the trimer has been confirmed from IR-UV hole-burning spectroscopy. The structures of the dimer and the trimer have been determined from resonant ion dip infrared (RIDIR) spectra combined with ab initio as well as DFT/M05-2X and DFT/M06-2X calculations. It has been found that the dimer, observed in the experiment, has a V-shaped geometry stabilized by N–H···N and C–H···N hydrogen bonding interactions, as well as C–H···π and π···π dispersion interactions. The geometry of the trimer has been found to be a cyclic one stabilized by N–H···N, N–H···π, C–H···π, and C–H···N interactions. The most important finding of this current study is the observation of the mixed dimer and trimer, which are stabilized by hydrogen bonding as well as dispersion interactions.</description><subject>A: Kinetics, Spectroscopy</subject><subject>Band spectra</subject><subject>Dimers</subject><subject>Dispersions</subject><subject>Hydrogen Bonding</subject><subject>Indoles - chemistry</subject><subject>Mass Spectrometry</subject><subject>Mathematical analysis</subject><subject>Polymers - chemistry</subject><subject>Pyridines - chemistry</subject><subject>Spectra</subject><subject>Spectroscopy</subject><subject>Trimers</subject><issn>1089-5639</issn><issn>1520-5215</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkc9OFTEUxhuiAUQXvICZjREWg_3f6RKuf8CQaAKuJ53OGezNve3QdmLu4_gU7n0yO1xkQYwhXfSk5_d9PTkfQocEnxBMybvlSDGVook7aJ8IimtBiXhWatzoWkim99CLlJYYY8Io30V7lEjGmVT76OcirEfILrvgqw7yDwBfnW_6GG5KcRZ87_xNZXxfvXdphJhm7sJniMbOmlQ5X-XvUN76sILfv-bzdRNd0UHRrCHeqY-2_WP6iLiOd8hVnnoH_Wxmqqtp_ih4Z6vPkF-i54NZJXh1fx-gbx8_XC_O68svny4Wp5e1YZLk2gKXDdHS4KHrOBay01xrS6xUtudU8UYxiaWGgVvVKS01x5qRhkqmMBsGdoDebn3HGG4nSLldu2RhtTIewpTaRnFeaC0LefRfkijBBCaKPw3lqgwuCnq8RW0MKUUY2rHsxsRNS3A7x9w-xFzY1_e2U7eG_oH8m2sB3mwBY1O7DFP0ZXX_MPoDYwuzLA</recordid><startdate>20110707</startdate><enddate>20110707</enddate><creator>Kumar, Sumit</creator><creator>Biswas, Partha</creator><creator>Kaul, Indu</creator><creator>Das, Aloke</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><scope>7X8</scope></search><sort><creationdate>20110707</creationdate><title>Competition between Hydrogen Bonding and Dispersion Interactions in the Indole···Pyridine Dimer and (Indole)2···Pyridine Trimer Studied in a Supersonic Jet</title><author>Kumar, Sumit ; Biswas, Partha ; Kaul, Indu ; Das, Aloke</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a361t-ce468196a0fbb4056b9499c1c67cd42748736069ef4c7b7969409318263703ff3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>A: Kinetics, Spectroscopy</topic><topic>Band spectra</topic><topic>Dimers</topic><topic>Dispersions</topic><topic>Hydrogen Bonding</topic><topic>Indoles - chemistry</topic><topic>Mass Spectrometry</topic><topic>Mathematical analysis</topic><topic>Polymers - chemistry</topic><topic>Pyridines - chemistry</topic><topic>Spectra</topic><topic>Spectroscopy</topic><topic>Trimers</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kumar, Sumit</creatorcontrib><creatorcontrib>Biswas, Partha</creatorcontrib><creatorcontrib>Kaul, Indu</creatorcontrib><creatorcontrib>Das, Aloke</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><jtitle>The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kumar, Sumit</au><au>Biswas, Partha</au><au>Kaul, Indu</au><au>Das, Aloke</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Competition between Hydrogen Bonding and Dispersion Interactions in the Indole···Pyridine Dimer and (Indole)2···Pyridine Trimer Studied in a Supersonic Jet</atitle><jtitle>The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory</jtitle><addtitle>J. Phys. Chem. A</addtitle><date>2011-07-07</date><risdate>2011</risdate><volume>115</volume><issue>26</issue><spage>7461</spage><epage>7472</epage><pages>7461-7472</pages><issn>1089-5639</issn><eissn>1520-5215</eissn><abstract>Structures of the indole···pyridine dimer and (indole)2···pyridine trimer have been investigated in a supersonic jet using resonant two-photon ionization (R2PI) and IR-UV double resonance spectroscopic techniques combined with quantum chemistry calculations. R2PI spectra of the dimer and the trimer recorded by electronic excitation of the indole moiety show that the red-shift in the band origin of the dimer with respect to the 00 0 band of the monomer is larger compared to that of the trimer. The presence of only one conformer in the case of both the dimer and the trimer has been confirmed from IR-UV hole-burning spectroscopy. The structures of the dimer and the trimer have been determined from resonant ion dip infrared (RIDIR) spectra combined with ab initio as well as DFT/M05-2X and DFT/M06-2X calculations. It has been found that the dimer, observed in the experiment, has a V-shaped geometry stabilized by N–H···N and C–H···N hydrogen bonding interactions, as well as C–H···π and π···π dispersion interactions. The geometry of the trimer has been found to be a cyclic one stabilized by N–H···N, N–H···π, C–H···π, and C–H···N interactions. The most important finding of this current study is the observation of the mixed dimer and trimer, which are stabilized by hydrogen bonding as well as dispersion interactions.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>21634367</pmid><doi>10.1021/jp202658r</doi><tpages>12</tpages></addata></record> |
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subjects | A: Kinetics, Spectroscopy Band spectra Dimers Dispersions Hydrogen Bonding Indoles - chemistry Mass Spectrometry Mathematical analysis Polymers - chemistry Pyridines - chemistry Spectra Spectroscopy Trimers |
title | Competition between Hydrogen Bonding and Dispersion Interactions in the Indole···Pyridine Dimer and (Indole)2···Pyridine Trimer Studied in a Supersonic Jet |
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