Genetic variants of the PITX3 gene are not associated with late-onset sporadic Parkinson's disease in a Chinese population

► PITX3 is a good candidate gene for Parkinson's disease (PD). ► Three PITX3 SNPs are reported to be associated with PD. ► The associations of these three PITX3 SNPs with PD were examined in Chinese. ► Allele and genotype frequencies did not differ between patients and controls. PITX3 is a tran...

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Veröffentlicht in:Neuroscience letters 2011-07, Vol.498 (2), p.124-126
Hauptverfasser: Cai, Yanning, Ding, Hui, Gu, Zhuqin, Ma, Jinghong, Chan, Piu
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container_title Neuroscience letters
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creator Cai, Yanning
Ding, Hui
Gu, Zhuqin
Ma, Jinghong
Chan, Piu
description ► PITX3 is a good candidate gene for Parkinson's disease (PD). ► Three PITX3 SNPs are reported to be associated with PD. ► The associations of these three PITX3 SNPs with PD were examined in Chinese. ► Allele and genotype frequencies did not differ between patients and controls. PITX3 is a transcription factor which determines the survival of dopaminergic neurons in the substantia nigra, and is considered a candidate gene for Parkinson's disease (PD). Recent association studies indicated that three PITX3 single nucleotide polymorphisms (SNPs), including rs2281983, rs4919621, and rs3758549 are likely to be associated with PD. However, no similar associations in Chinese populations have been reported. To examine the nature of the association in Chinese individuals we analyzed DNA samples for these three PITX3 SNPs from 509 late-onset sporadic PD patients, and 494 healthy controls, using a ligase detection reaction (LDR). Results indicated that allele and genotype frequencies did not differ between patients and controls for all three SNPs, suggesting that these SNP sites do not contribute to the risk of developing PD in late-onset sporadic PD in this Chinese population.
doi_str_mv 10.1016/j.neulet.2011.04.073
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PITX3 is a transcription factor which determines the survival of dopaminergic neurons in the substantia nigra, and is considered a candidate gene for Parkinson's disease (PD). Recent association studies indicated that three PITX3 single nucleotide polymorphisms (SNPs), including rs2281983, rs4919621, and rs3758549 are likely to be associated with PD. However, no similar associations in Chinese populations have been reported. To examine the nature of the association in Chinese individuals we analyzed DNA samples for these three PITX3 SNPs from 509 late-onset sporadic PD patients, and 494 healthy controls, using a ligase detection reaction (LDR). 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Psychology ; Gene Frequency ; Genotype ; Homeodomain Proteins - genetics ; Homeodomain Proteins - physiology ; Humans ; Ligase Chain Reaction ; Male ; Medical sciences ; Middle Aged ; Neurology ; Parkinson Disease - epidemiology ; Parkinson Disease - genetics ; Parkinson's disease ; PITX3 ; Polymorphism, Single Nucleotide ; Single nucleotide polymorphism ; Transcription Factors - genetics ; Transcription Factors - physiology ; Vertebrates: nervous system and sense organs</subject><ispartof>Neuroscience letters, 2011-07, Vol.498 (2), p.124-126</ispartof><rights>2011 Elsevier Ireland Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2011 Elsevier Ireland Ltd. 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PITX3 is a transcription factor which determines the survival of dopaminergic neurons in the substantia nigra, and is considered a candidate gene for Parkinson's disease (PD). Recent association studies indicated that three PITX3 single nucleotide polymorphisms (SNPs), including rs2281983, rs4919621, and rs3758549 are likely to be associated with PD. However, no similar associations in Chinese populations have been reported. To examine the nature of the association in Chinese individuals we analyzed DNA samples for these three PITX3 SNPs from 509 late-onset sporadic PD patients, and 494 healthy controls, using a ligase detection reaction (LDR). 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Psychology</subject><subject>Gene Frequency</subject><subject>Genotype</subject><subject>Homeodomain Proteins - genetics</subject><subject>Homeodomain Proteins - physiology</subject><subject>Humans</subject><subject>Ligase Chain Reaction</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Middle Aged</subject><subject>Neurology</subject><subject>Parkinson Disease - epidemiology</subject><subject>Parkinson Disease - genetics</subject><subject>Parkinson's disease</subject><subject>PITX3</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Single nucleotide polymorphism</subject><subject>Transcription Factors - genetics</subject><subject>Transcription Factors - physiology</subject><subject>Vertebrates: nervous system and sense organs</subject><issn>0304-3940</issn><issn>1872-7972</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU9v1DAQxS0EokvhGyDkC-opwf_iJBcktIK2UiV6KBI3y-tMWC9ZO3icVvDp8Wq3cIOTx_LvvfHMI-Q1ZzVnXL_b1QGWCXItGOc1UzVr5ROy4l0rqrZvxVOyYpKpSvaKnZEXiDvGWMMb9ZycCd7oRjR8RX5dQoDsHb23yduQkcaR5i3Q2-u7r5J-K6_UJqAhZmoRo_M2w0AffN7SqZRVDAiZ4hyTHYrNrU3ffcAYLpAOHsEiUB-opeutD1Auc5yXIvQxvCTPRjshvDqd5-TLp49366vq5vPl9frDTeWUkLnqRqUHa3mrRxg5E7JMqEU7SN0LMXZCylZJEJ3suG5GyzRTru3ZZsN7y4dOyXNycfSdU_yxAGaz9-hgmmyAuKDpWsW7XpT1_Z8UjeS6awqpjqRLETHBaObk9zb9NJyZQzxmZ47xmEM8hilT_IvszanBstnD8Ef0mEcB3p4Ai85OY7LBefzLKaF1Kw_93x85KIu795AMOg_BweATuGyG6P_9k99k_a7e</recordid><startdate>20110708</startdate><enddate>20110708</enddate><creator>Cai, Yanning</creator><creator>Ding, Hui</creator><creator>Gu, Zhuqin</creator><creator>Ma, Jinghong</creator><creator>Chan, Piu</creator><general>Elsevier Ireland Ltd</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7TK</scope></search><sort><creationdate>20110708</creationdate><title>Genetic variants of the PITX3 gene are not associated with late-onset sporadic Parkinson's disease in a Chinese population</title><author>Cai, Yanning ; Ding, Hui ; Gu, Zhuqin ; Ma, Jinghong ; Chan, Piu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-8f46daa176fef1023187627d36922f8233743e2838165fa0604c790bb19a1d843</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Age of Onset</topic><topic>Aged</topic><topic>Alleles</topic><topic>Biological and medical sciences</topic><topic>Case–control study</topic><topic>China - epidemiology</topic><topic>Degenerative and inherited degenerative diseases of the nervous system. Leukodystrophies. Prion diseases</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Frequency</topic><topic>Genotype</topic><topic>Homeodomain Proteins - genetics</topic><topic>Homeodomain Proteins - physiology</topic><topic>Humans</topic><topic>Ligase Chain Reaction</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Middle Aged</topic><topic>Neurology</topic><topic>Parkinson Disease - epidemiology</topic><topic>Parkinson Disease - genetics</topic><topic>Parkinson's disease</topic><topic>PITX3</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Single nucleotide polymorphism</topic><topic>Transcription Factors - genetics</topic><topic>Transcription Factors - physiology</topic><topic>Vertebrates: nervous system and sense organs</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cai, Yanning</creatorcontrib><creatorcontrib>Ding, Hui</creatorcontrib><creatorcontrib>Gu, Zhuqin</creatorcontrib><creatorcontrib>Ma, Jinghong</creatorcontrib><creatorcontrib>Chan, Piu</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Neurosciences Abstracts</collection><jtitle>Neuroscience letters</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cai, Yanning</au><au>Ding, Hui</au><au>Gu, Zhuqin</au><au>Ma, Jinghong</au><au>Chan, Piu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic variants of the PITX3 gene are not associated with late-onset sporadic Parkinson's disease in a Chinese population</atitle><jtitle>Neuroscience letters</jtitle><addtitle>Neurosci Lett</addtitle><date>2011-07-08</date><risdate>2011</risdate><volume>498</volume><issue>2</issue><spage>124</spage><epage>126</epage><pages>124-126</pages><issn>0304-3940</issn><eissn>1872-7972</eissn><coden>NELED5</coden><abstract>► PITX3 is a good candidate gene for Parkinson's disease (PD). ► Three PITX3 SNPs are reported to be associated with PD. ► The associations of these three PITX3 SNPs with PD were examined in Chinese. ► Allele and genotype frequencies did not differ between patients and controls. PITX3 is a transcription factor which determines the survival of dopaminergic neurons in the substantia nigra, and is considered a candidate gene for Parkinson's disease (PD). Recent association studies indicated that three PITX3 single nucleotide polymorphisms (SNPs), including rs2281983, rs4919621, and rs3758549 are likely to be associated with PD. However, no similar associations in Chinese populations have been reported. To examine the nature of the association in Chinese individuals we analyzed DNA samples for these three PITX3 SNPs from 509 late-onset sporadic PD patients, and 494 healthy controls, using a ligase detection reaction (LDR). 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subjects Age of Onset
Aged
Alleles
Biological and medical sciences
Case–control study
China - epidemiology
Degenerative and inherited degenerative diseases of the nervous system. Leukodystrophies. Prion diseases
Female
Fundamental and applied biological sciences. Psychology
Gene Frequency
Genotype
Homeodomain Proteins - genetics
Homeodomain Proteins - physiology
Humans
Ligase Chain Reaction
Male
Medical sciences
Middle Aged
Neurology
Parkinson Disease - epidemiology
Parkinson Disease - genetics
Parkinson's disease
PITX3
Polymorphism, Single Nucleotide
Single nucleotide polymorphism
Transcription Factors - genetics
Transcription Factors - physiology
Vertebrates: nervous system and sense organs
title Genetic variants of the PITX3 gene are not associated with late-onset sporadic Parkinson's disease in a Chinese population
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