Phylogenetics of Paniceae (Poaceae)
Paniceae demonstrate unique variability of photosynthetic physiology and anatomy, including both non-Kranz and Kranz species and all subtypes of the latter. This variability suggests hypotheses of independent origin or reversals (e.g., from C4to C3). These hypotheses can be tested by phylogenetic an...
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Veröffentlicht in: | American journal of botany 2001-11, Vol.88 (11), p.1988-1992 |
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container_end_page | 1992 |
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container_issue | 11 |
container_start_page | 1988 |
container_title | American journal of botany |
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creator | Duvall, Melvin R. Noll, Jeffrey D. Minn, Alexandra H. |
description | Paniceae demonstrate unique variability of photosynthetic physiology and anatomy, including both non-Kranz and Kranz species and all subtypes of the latter. This variability suggests hypotheses of independent origin or reversals (e.g., from C4to C3). These hypotheses can be tested by phylogenetic analysis of independent molecular characters. The molecular phylogeny of 57 species of Paniceae was explored using sequences from the grass-specific insert found in the plastid locus rpoC2. Phylogenetic analyses confirmed some long-recognized alliances in Paniceae, some recent molecular phylogenetic results, and suggested new relationships. Broadly, Paniceae were found to be paraphyletic with Andropogoneae, Panicum was found to be polyphyletic, and Oplismenus hirtellus was resolved as the sister group to the remaining ingroup species. A particularly well-supported clade in the rpoC2 tree included four genera with non-Kranz species and three with distinctively keeled paleas. As previously suggested, the PCK (phosphoenol pyruvate carboxykinase) C4subtype arose once within Paniceae. All clades with non-Kranz species had Kranz ancestors or sister taxa suggesting repeated loss of the Kranz syndrome. |
doi_str_mv | 10.2307/3558426 |
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This variability suggests hypotheses of independent origin or reversals (e.g., from C4to C3). These hypotheses can be tested by phylogenetic analysis of independent molecular characters. The molecular phylogeny of 57 species of Paniceae was explored using sequences from the grass-specific insert found in the plastid locus rpoC2. Phylogenetic analyses confirmed some long-recognized alliances in Paniceae, some recent molecular phylogenetic results, and suggested new relationships. Broadly, Paniceae were found to be paraphyletic with Andropogoneae, Panicum was found to be polyphyletic, and Oplismenus hirtellus was resolved as the sister group to the remaining ingroup species. A particularly well-supported clade in the rpoC2 tree included four genera with non-Kranz species and three with distinctively keeled paleas. As previously suggested, the PCK (phosphoenol pyruvate carboxykinase) C4subtype arose once within Paniceae. All clades with non-Kranz species had Kranz ancestors or sister taxa suggesting repeated loss of the Kranz syndrome.</description><identifier>ISSN: 0002-9122</identifier><identifier>EISSN: 1537-2197</identifier><identifier>DOI: 10.2307/3558426</identifier><identifier>PMID: 21669632</identifier><identifier>CODEN: AJBOAA</identifier><language>eng</language><publisher>United States: Botanical Soc America</publisher><subject>Anatomy & physiology ; Biological taxonomies ; Botany ; C3 plants ; C4 plants ; Evolution ; Genera ; Grasses ; Kranz ; loci ; molecular phylogenetics ; non‐Kranz ; nucleotide sequences ; Paniceae ; Panicum ; Photosynthesis ; Phylogenetics ; Phylogeny ; Physiology ; plant anatomy ; plant physiology ; Plants ; Plastids ; Poaceae ; rpoC2 gene ; rpoC2 insert ; Systematics ; Taxa ; taxonomic revisions ; Trees</subject><ispartof>American journal of botany, 2001-11, Vol.88 (11), p.1988-1992</ispartof><rights>Copyright 2001 Botanical Society of America, Inc.</rights><rights>2001 Botanical Society of America</rights><rights>Copyright Botanical Society of America, Inc. Nov 2001</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5578-7823d96808508920bd46d017643f9951066fe20d31174734c97b5c6598df049a3</citedby><cites>FETCH-LOGICAL-c5578-7823d96808508920bd46d017643f9951066fe20d31174734c97b5c6598df049a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/3558426$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/3558426$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,799,1411,1427,27901,27902,45550,45551,46384,46808,57992,58225</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21669632$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Duvall, Melvin R.</creatorcontrib><creatorcontrib>Noll, Jeffrey D.</creatorcontrib><creatorcontrib>Minn, Alexandra H.</creatorcontrib><title>Phylogenetics of Paniceae (Poaceae)</title><title>American journal of botany</title><addtitle>Am J Bot</addtitle><description>Paniceae demonstrate unique variability of photosynthetic physiology and anatomy, including both non-Kranz and Kranz species and all subtypes of the latter. This variability suggests hypotheses of independent origin or reversals (e.g., from C4to C3). These hypotheses can be tested by phylogenetic analysis of independent molecular characters. The molecular phylogeny of 57 species of Paniceae was explored using sequences from the grass-specific insert found in the plastid locus rpoC2. Phylogenetic analyses confirmed some long-recognized alliances in Paniceae, some recent molecular phylogenetic results, and suggested new relationships. Broadly, Paniceae were found to be paraphyletic with Andropogoneae, Panicum was found to be polyphyletic, and Oplismenus hirtellus was resolved as the sister group to the remaining ingroup species. A particularly well-supported clade in the rpoC2 tree included four genera with non-Kranz species and three with distinctively keeled paleas. As previously suggested, the PCK (phosphoenol pyruvate carboxykinase) C4subtype arose once within Paniceae. All clades with non-Kranz species had Kranz ancestors or sister taxa suggesting repeated loss of the Kranz syndrome.</description><subject>Anatomy & physiology</subject><subject>Biological taxonomies</subject><subject>Botany</subject><subject>C3 plants</subject><subject>C4 plants</subject><subject>Evolution</subject><subject>Genera</subject><subject>Grasses</subject><subject>Kranz</subject><subject>loci</subject><subject>molecular phylogenetics</subject><subject>non‐Kranz</subject><subject>nucleotide sequences</subject><subject>Paniceae</subject><subject>Panicum</subject><subject>Photosynthesis</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Physiology</subject><subject>plant anatomy</subject><subject>plant physiology</subject><subject>Plants</subject><subject>Plastids</subject><subject>Poaceae</subject><subject>rpoC2 gene</subject><subject>rpoC2 insert</subject><subject>Systematics</subject><subject>Taxa</subject><subject>taxonomic revisions</subject><subject>Trees</subject><issn>0002-9122</issn><issn>1537-2197</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><recordid>eNqF0VtLwzAUB_AgiptT_AIiQ8HLQzUn9zzO4ZWBe9Dn0LXp1tGus1kp-_Zmrm4gqE9J4Mf_nJOD0DHgG0KxvKWcK0bEDmoDpzIgoOUuamOMSaCBkBY6cG7qn5ppso9aBITQgpI2Oh9OllkxtjO7SCPXLZLuMJylkQ1t92pYhKvL9SHaS8LM2aPm7KD3h_u3_lMweH187vcGQcS5VIFUhMZaKKw4VprgUcxEjEEKRhOtOWAhEktwTAEkk5RFWo54JLhWcYKZDmkHXa5z52XxUVm3MHnqIptl4cwWlTNKghaMU_Dy4k_JNCaCU_EvBEUExUR6ePYDTouqnPlxDQGupFICbxuMysK50iZmXqZ5WC4NYLPag2n24OVpE1eNchtv3PfHexCsQZ1mdvlbjum93PldKuX9ydpP3aIoN35br-lsko4ndVpa4_Iwy3x1MHVdK2UAzFfQJ61foAU</recordid><startdate>200111</startdate><enddate>200111</enddate><creator>Duvall, Melvin R.</creator><creator>Noll, Jeffrey D.</creator><creator>Minn, Alexandra H.</creator><general>Botanical Soc America</general><general>Botanical Society of America</general><general>Botanical Society of America, Inc</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7S9</scope><scope>L.6</scope><scope>7X8</scope></search><sort><creationdate>200111</creationdate><title>Phylogenetics of Paniceae (Poaceae)</title><author>Duvall, Melvin R. ; Noll, Jeffrey D. ; Minn, Alexandra H.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5578-7823d96808508920bd46d017643f9951066fe20d31174734c97b5c6598df049a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>Anatomy & physiology</topic><topic>Biological taxonomies</topic><topic>Botany</topic><topic>C3 plants</topic><topic>C4 plants</topic><topic>Evolution</topic><topic>Genera</topic><topic>Grasses</topic><topic>Kranz</topic><topic>loci</topic><topic>molecular phylogenetics</topic><topic>non‐Kranz</topic><topic>nucleotide sequences</topic><topic>Paniceae</topic><topic>Panicum</topic><topic>Photosynthesis</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Physiology</topic><topic>plant anatomy</topic><topic>plant physiology</topic><topic>Plants</topic><topic>Plastids</topic><topic>Poaceae</topic><topic>rpoC2 gene</topic><topic>rpoC2 insert</topic><topic>Systematics</topic><topic>Taxa</topic><topic>taxonomic revisions</topic><topic>Trees</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Duvall, Melvin R.</creatorcontrib><creatorcontrib>Noll, Jeffrey D.</creatorcontrib><creatorcontrib>Minn, Alexandra H.</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>MEDLINE - Academic</collection><jtitle>American journal of botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Duvall, Melvin R.</au><au>Noll, Jeffrey D.</au><au>Minn, Alexandra H.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogenetics of Paniceae (Poaceae)</atitle><jtitle>American journal of botany</jtitle><addtitle>Am J Bot</addtitle><date>2001-11</date><risdate>2001</risdate><volume>88</volume><issue>11</issue><spage>1988</spage><epage>1992</epage><pages>1988-1992</pages><issn>0002-9122</issn><eissn>1537-2197</eissn><coden>AJBOAA</coden><abstract>Paniceae demonstrate unique variability of photosynthetic physiology and anatomy, including both non-Kranz and Kranz species and all subtypes of the latter. This variability suggests hypotheses of independent origin or reversals (e.g., from C4to C3). These hypotheses can be tested by phylogenetic analysis of independent molecular characters. The molecular phylogeny of 57 species of Paniceae was explored using sequences from the grass-specific insert found in the plastid locus rpoC2. Phylogenetic analyses confirmed some long-recognized alliances in Paniceae, some recent molecular phylogenetic results, and suggested new relationships. Broadly, Paniceae were found to be paraphyletic with Andropogoneae, Panicum was found to be polyphyletic, and Oplismenus hirtellus was resolved as the sister group to the remaining ingroup species. A particularly well-supported clade in the rpoC2 tree included four genera with non-Kranz species and three with distinctively keeled paleas. As previously suggested, the PCK (phosphoenol pyruvate carboxykinase) C4subtype arose once within Paniceae. 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subjects | Anatomy & physiology Biological taxonomies Botany C3 plants C4 plants Evolution Genera Grasses Kranz loci molecular phylogenetics non‐Kranz nucleotide sequences Paniceae Panicum Photosynthesis Phylogenetics Phylogeny Physiology plant anatomy plant physiology Plants Plastids Poaceae rpoC2 gene rpoC2 insert Systematics Taxa taxonomic revisions Trees |
title | Phylogenetics of Paniceae (Poaceae) |
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