Theoretical Molecular Descriptors Relevant to the Uptake of Persistent Organic Pollutants from Soil by Zucchini. A QSAR Study
The uptake of persistent organic pollutants (POPs) from soil by plants allows the development of phytoremediation protocols to rehabilitate contaminated areas. The use of diverse theoretical descriptors has been reported in the literature for developing quantitative structure−activity relationship (...
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Veröffentlicht in: | Journal of agricultural and food chemistry 2011-04, Vol.59 (7), p.2863-2869 |
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description | The uptake of persistent organic pollutants (POPs) from soil by plants allows the development of phytoremediation protocols to rehabilitate contaminated areas. The use of diverse theoretical descriptors has been reported in the literature for developing quantitative structure−activity relationship (QSAR) models for predicting the bioconcentration factors (BCFs) of POPs in different plants. In this paper an evaluation is given on the molecular properties of POPs in terms of theoretical molecular descriptors that are relevant to the uptake and accumulation of these persistent pollutants from soil by two zucchini varieties. Statistically significant and predictive linear regression models have been developed for the BCF values of 20 polychlorinated dibenzo-p-dioxins/dibenzofurans and 14 polyhalogenated biphenyls in two zucchini varieties based on retrospective data. The relevant parameters have been selected from a set of 1660 DRAGON, 150 VolSurf, and 11 quantum chemical descriptors. The two most significant regression models, containing VolSurf, DRAGON GETAWAY, and quantum chemical descriptors, displayed the following statistical parameters: (eq ) n = 27, R 2 = 0.940, q 2 = 0.922, SE = 0.155, F = 392.1; (eq ) n = 27, R 2 = 0.921, q 2 = 0.898, SE = 0.161, F = 140.4. Predictive capabilities of the equations have been validated by using external validation sets. The QSAR models proposed might contribute to the development of viable soil remediation strategies. |
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Statistically significant and predictive linear regression models have been developed for the BCF values of 20 polychlorinated dibenzo-p-dioxins/dibenzofurans and 14 polyhalogenated biphenyls in two zucchini varieties based on retrospective data. The relevant parameters have been selected from a set of 1660 DRAGON, 150 VolSurf, and 11 quantum chemical descriptors. The two most significant regression models, containing VolSurf, DRAGON GETAWAY, and quantum chemical descriptors, displayed the following statistical parameters: (eq ) n = 27, R 2 = 0.940, q 2 = 0.922, SE = 0.155, F = 392.1; (eq ) n = 27, R 2 = 0.921, q 2 = 0.898, SE = 0.161, F = 140.4. Predictive capabilities of the equations have been validated by using external validation sets. The QSAR models proposed might contribute to the development of viable soil remediation strategies.</description><identifier>ISSN: 0021-8561</identifier><identifier>EISSN: 1520-5118</identifier><identifier>DOI: 10.1021/jf1038772</identifier><identifier>PMID: 21244025</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Benzofurans - chemistry ; Benzofurans - metabolism ; bioaccumulation ; Cucurbita - metabolism ; equations ; Linear Models ; persistent organic pollutants ; phytoremediation ; Polychlorinated Dibenzodioxins - analogs & derivatives ; Polychlorinated Dibenzodioxins - chemistry ; Polychlorinated Dibenzodioxins - metabolism ; prediction ; Quantitative Structure-Activity Relationship ; quantitative structure-activity relationships ; regression analysis ; soil ; Soil Pollutants - chemistry ; Soil Pollutants - metabolism ; soil remediation ; zucchini</subject><ispartof>Journal of agricultural and food chemistry, 2011-04, Vol.59 (7), p.2863-2869</ispartof><rights>Copyright © 2011 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a338t-953ed2ff6487874e25547b102e364f0b39ed9c7fe40dc27649fc8dab6d6e065d3</citedby><cites>FETCH-LOGICAL-a338t-953ed2ff6487874e25547b102e364f0b39ed9c7fe40dc27649fc8dab6d6e065d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/jf1038772$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/jf1038772$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,780,784,2765,27076,27924,27925,56738,56788</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21244025$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bordas, Barna</creatorcontrib><creatorcontrib>Belai, Ivan</creatorcontrib><creatorcontrib>Komives, Tamas</creatorcontrib><title>Theoretical Molecular Descriptors Relevant to the Uptake of Persistent Organic Pollutants from Soil by Zucchini. A QSAR Study</title><title>Journal of agricultural and food chemistry</title><addtitle>J. Agric. Food Chem</addtitle><description>The uptake of persistent organic pollutants (POPs) from soil by plants allows the development of phytoremediation protocols to rehabilitate contaminated areas. The use of diverse theoretical descriptors has been reported in the literature for developing quantitative structure−activity relationship (QSAR) models for predicting the bioconcentration factors (BCFs) of POPs in different plants. In this paper an evaluation is given on the molecular properties of POPs in terms of theoretical molecular descriptors that are relevant to the uptake and accumulation of these persistent pollutants from soil by two zucchini varieties. Statistically significant and predictive linear regression models have been developed for the BCF values of 20 polychlorinated dibenzo-p-dioxins/dibenzofurans and 14 polyhalogenated biphenyls in two zucchini varieties based on retrospective data. The relevant parameters have been selected from a set of 1660 DRAGON, 150 VolSurf, and 11 quantum chemical descriptors. The two most significant regression models, containing VolSurf, DRAGON GETAWAY, and quantum chemical descriptors, displayed the following statistical parameters: (eq ) n = 27, R 2 = 0.940, q 2 = 0.922, SE = 0.155, F = 392.1; (eq ) n = 27, R 2 = 0.921, q 2 = 0.898, SE = 0.161, F = 140.4. Predictive capabilities of the equations have been validated by using external validation sets. The QSAR models proposed might contribute to the development of viable soil remediation strategies.</description><subject>Benzofurans - chemistry</subject><subject>Benzofurans - metabolism</subject><subject>bioaccumulation</subject><subject>Cucurbita - metabolism</subject><subject>equations</subject><subject>Linear Models</subject><subject>persistent organic pollutants</subject><subject>phytoremediation</subject><subject>Polychlorinated Dibenzodioxins - analogs & derivatives</subject><subject>Polychlorinated Dibenzodioxins - chemistry</subject><subject>Polychlorinated Dibenzodioxins - metabolism</subject><subject>prediction</subject><subject>Quantitative Structure-Activity Relationship</subject><subject>quantitative structure-activity relationships</subject><subject>regression analysis</subject><subject>soil</subject><subject>Soil Pollutants - chemistry</subject><subject>Soil Pollutants - metabolism</subject><subject>soil remediation</subject><subject>zucchini</subject><issn>0021-8561</issn><issn>1520-5118</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpt0T1vFDEQBmALgcgRKPgD4AahFBtsr73rLU-BfEhBCblcQ2N5veOcD9_6YnuRruC_x9ElqaimmEczmncQ-kjJMSWMfltbSmrZtuwVmlHBSCUola_RjJRmJUVDD9C7lNaEECla8hYdMMo4J0zM0L_bFYQI2Rnt8c_gwUxeR_wdkolum0NM-AY8_NVjxjngvAK83Gb9B3Cw-BpicilD6V3FOz06g6-D91MuOmEbwwYvgvO43-HfkzErN7pjPMe_FvMbvMjTsHuP3ljtE3x4qodoefrj9uS8urw6uziZX1a6rmWuOlHDwKxtuGxly4EJwdu-nA51wy3p6w6GzrQWOBkMaxveWSMH3TdDA6QRQ32Ivu7nbmO4nyBltXHJgPd6hDAlJRtJWMeELPJoL00MKUWwahvdRsedokQ9hq1ewi7209PUqd_A8CKf0y3g8x5YHZS-iy6p5YIRyssnOsFlXcSXvdAmqXWY4lhi-M-qB4amjww</recordid><startdate>20110413</startdate><enddate>20110413</enddate><creator>Bordas, Barna</creator><creator>Belai, Ivan</creator><creator>Komives, Tamas</creator><general>American Chemical Society</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20110413</creationdate><title>Theoretical Molecular Descriptors Relevant to the Uptake of Persistent Organic Pollutants from Soil by Zucchini. A QSAR Study</title><author>Bordas, Barna ; Belai, Ivan ; Komives, Tamas</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a338t-953ed2ff6487874e25547b102e364f0b39ed9c7fe40dc27649fc8dab6d6e065d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Benzofurans - chemistry</topic><topic>Benzofurans - metabolism</topic><topic>bioaccumulation</topic><topic>Cucurbita - metabolism</topic><topic>equations</topic><topic>Linear Models</topic><topic>persistent organic pollutants</topic><topic>phytoremediation</topic><topic>Polychlorinated Dibenzodioxins - analogs & derivatives</topic><topic>Polychlorinated Dibenzodioxins - chemistry</topic><topic>Polychlorinated Dibenzodioxins - metabolism</topic><topic>prediction</topic><topic>Quantitative Structure-Activity Relationship</topic><topic>quantitative structure-activity relationships</topic><topic>regression analysis</topic><topic>soil</topic><topic>Soil Pollutants - chemistry</topic><topic>Soil Pollutants - metabolism</topic><topic>soil remediation</topic><topic>zucchini</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bordas, Barna</creatorcontrib><creatorcontrib>Belai, Ivan</creatorcontrib><creatorcontrib>Komives, Tamas</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of agricultural and food chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bordas, Barna</au><au>Belai, Ivan</au><au>Komives, Tamas</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Theoretical Molecular Descriptors Relevant to the Uptake of Persistent Organic Pollutants from Soil by Zucchini. 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Statistically significant and predictive linear regression models have been developed for the BCF values of 20 polychlorinated dibenzo-p-dioxins/dibenzofurans and 14 polyhalogenated biphenyls in two zucchini varieties based on retrospective data. The relevant parameters have been selected from a set of 1660 DRAGON, 150 VolSurf, and 11 quantum chemical descriptors. The two most significant regression models, containing VolSurf, DRAGON GETAWAY, and quantum chemical descriptors, displayed the following statistical parameters: (eq ) n = 27, R 2 = 0.940, q 2 = 0.922, SE = 0.155, F = 392.1; (eq ) n = 27, R 2 = 0.921, q 2 = 0.898, SE = 0.161, F = 140.4. Predictive capabilities of the equations have been validated by using external validation sets. The QSAR models proposed might contribute to the development of viable soil remediation strategies.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>21244025</pmid><doi>10.1021/jf1038772</doi><tpages>7</tpages></addata></record> |
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subjects | Benzofurans - chemistry Benzofurans - metabolism bioaccumulation Cucurbita - metabolism equations Linear Models persistent organic pollutants phytoremediation Polychlorinated Dibenzodioxins - analogs & derivatives Polychlorinated Dibenzodioxins - chemistry Polychlorinated Dibenzodioxins - metabolism prediction Quantitative Structure-Activity Relationship quantitative structure-activity relationships regression analysis soil Soil Pollutants - chemistry Soil Pollutants - metabolism soil remediation zucchini |
title | Theoretical Molecular Descriptors Relevant to the Uptake of Persistent Organic Pollutants from Soil by Zucchini. A QSAR Study |
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