FungiFun: A web-based application for functional categorization of fungal genes and proteins
FungiFun assigns functional annotations to fungal genes or proteins and performs gene set enrichment analysis. Based on three different classification methods (FunCat, GO and KEGG), FungiFun categorizes genes and proteins for several fungal species on different levels of annotation detail. It is web...
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| Veröffentlicht in: | Fungal genetics and biology 2011-04, Vol.48 (4), p.353-358 |
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| container_issue | 4 |
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| container_title | Fungal genetics and biology |
| container_volume | 48 |
| creator | Priebe, Steffen Linde, Jörg Albrecht, Daniela Guthke, Reinhard Brakhage, Axel A. |
| description | FungiFun assigns functional annotations to fungal genes or proteins and performs gene set enrichment analysis. Based on three different classification methods (FunCat, GO and KEGG), FungiFun categorizes genes and proteins for several fungal species on different levels of annotation detail. It is web-based and accessible to users without any programming skills. FungiFun is the first tool offering gene set enrichment analysis including the FunCat categorization. Two biological datasets for
Aspergillus fumigatus and
Candida albicans were analyzed using FungiFun, providing an overview of the usage and functions of the tool. FungiFun is freely accessible at
https://www.omnifung.hki-jena.de/FungiFun/. |
| doi_str_mv | 10.1016/j.fgb.2010.11.001 |
| format | Article |
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Aspergillus fumigatus and
Candida albicans were analyzed using FungiFun, providing an overview of the usage and functions of the tool. FungiFun is freely accessible at
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Aspergillus fumigatus and
Candida albicans were analyzed using FungiFun, providing an overview of the usage and functions of the tool. FungiFun is freely accessible at
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Aspergillus fumigatus and
Candida albicans were analyzed using FungiFun, providing an overview of the usage and functions of the tool. FungiFun is freely accessible at
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| fulltext | fulltext |
| identifier | ISSN: 1087-1845 |
| ispartof | Fungal genetics and biology, 2011-04, Vol.48 (4), p.353-358 |
| issn | 1087-1845 1096-0937 |
| language | eng |
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| source | MEDLINE; ScienceDirect Journals (5 years ago - present) |
| subjects | Aspergillus Aspergillus fumigatus Aspergillus fumigatus - genetics Candida Candida albicans Candida albicans - genetics Classification Computational Biology - methods Enrichment analysis FunCat Functional annotation Fungal Proteins - genetics Fungal Proteins - physiology Fungi Gene Ontology Genes, Fungal Internet KEGG Yeast |
| title | FungiFun: A web-based application for functional categorization of fungal genes and proteins |
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