Tomato necrotic ringspot virus, a new tospovirus isolated in Thailand
A new tospovirus isolated from naturally infected tomato plants grown in Nakhon Pathom province (Thailand) was characterized. Infected plants showed symptoms consisting of necrotic spots, necrotic ringspots and stem necrosis. This virus was detected using general antibodies that could recognize wate...
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Veröffentlicht in: | Archives of virology 2011-02, Vol.156 (2), p.263-274 |
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description | A new tospovirus isolated from naturally infected tomato plants grown in Nakhon Pathom province (Thailand) was characterized. Infected plants showed symptoms consisting of necrotic spots, necrotic ringspots and stem necrosis. This virus was detected using general antibodies that could recognize watermelon silver mottle virus (WSMoV), capsicum chlorosis virus (CaCV) and melon yellow spot virus (MYSV). However, it did not react with specific monoclonal antibodies (MAbs) to WSMoV and CaCV or a specific MAb to MYSV. The complete nucleotide sequences of S and M RNAs of the virus were determined. They were 3,023 and 4,716 nucleotides in length, respectively, and contained two ORFs in an ambisense arrangement. Sequence analysis indicated that amino acid sequence of the N protein shared 58.2%, 56.0% and 51.8% identity with those of CaCV, WSMoV and MYSV, respectively. The virus was experimentally transmitted by Thrips palmi and Ceratothripoides claratris. Based on our results, we conclude that this tospovirus isolate should be considered a member of a new species. The name tomato necrotic ringspot virus (TNRV) is proposed for this tospovirus. |
doi_str_mv | 10.1007/s00705-010-0856-0 |
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Infected plants showed symptoms consisting of necrotic spots, necrotic ringspots and stem necrosis. This virus was detected using general antibodies that could recognize watermelon silver mottle virus (WSMoV), capsicum chlorosis virus (CaCV) and melon yellow spot virus (MYSV). However, it did not react with specific monoclonal antibodies (MAbs) to WSMoV and CaCV or a specific MAb to MYSV. The complete nucleotide sequences of S and M RNAs of the virus were determined. They were 3,023 and 4,716 nucleotides in length, respectively, and contained two ORFs in an ambisense arrangement. Sequence analysis indicated that amino acid sequence of the N protein shared 58.2%, 56.0% and 51.8% identity with those of CaCV, WSMoV and MYSV, respectively. The virus was experimentally transmitted by Thrips palmi and Ceratothripoides claratris. Based on our results, we conclude that this tospovirus isolate should be considered a member of a new species. The name tomato necrotic ringspot virus (TNRV) is proposed for this tospovirus.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-010-0856-0</identifier><identifier>PMID: 21104282</identifier><language>eng</language><publisher>Vienna: Vienna : Springer Vienna</publisher><subject>Amino Acid Sequence ; Animals ; Antibodies ; Base Sequence ; Biological and medical sciences ; Biomedical and Life Sciences ; Biomedicine ; Bunyaviridae Infections - transmission ; Bunyaviridae Infections - virology ; Capsicum ; DNA Primers - genetics ; Flowers & plants ; Fundamental and applied biological sciences. Psychology ; Genetically altered foods ; Genomes ; Infectious Diseases ; Insect Vectors - virology ; Lycopersicon esculentum ; Lycopersicon esculentum - virology ; Medical Microbiology ; Melon yellow spot virus ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Morphology ; Nucleocapsid Proteins - genetics ; Nucleocapsid Proteins - immunology ; Open Reading Frames ; Original Article ; Phylogeny ; Phytopathology. Animal pests. Plant and forest protection ; Plant Diseases - virology ; Plant viruses and viroids ; Proteins ; RNA, Viral - genetics ; Serology ; Serotyping ; Thailand ; Thrips palmi ; Tomatoes ; Tospovirus ; Tospovirus - classification ; Tospovirus - genetics ; Tospovirus - isolation & purification ; Viral Proteins - genetics ; Virology ; Viruses ; Watermelon silver mottle virus</subject><ispartof>Archives of virology, 2011-02, Vol.156 (2), p.263-274</ispartof><rights>Springer-Verlag 2010</rights><rights>2015 INIST-CNRS</rights><rights>Springer-Verlag 2011</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c522t-f309f838447e8242086ab3652b97d3879b9abe1a412242e9fb8b737a6f6137063</citedby><cites>FETCH-LOGICAL-c522t-f309f838447e8242086ab3652b97d3879b9abe1a412242e9fb8b737a6f6137063</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-010-0856-0$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-010-0856-0$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27923,27924,41487,42556,51318</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23843951$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21104282$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Seepiban, Channarong</creatorcontrib><creatorcontrib>Gajanandana, Oraprapai</creatorcontrib><creatorcontrib>Attathom, Tipvadee</creatorcontrib><creatorcontrib>Attathom, Supat</creatorcontrib><title>Tomato necrotic ringspot virus, a new tospovirus isolated in Thailand</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>A new tospovirus isolated from naturally infected tomato plants grown in Nakhon Pathom province (Thailand) was characterized. Infected plants showed symptoms consisting of necrotic spots, necrotic ringspots and stem necrosis. This virus was detected using general antibodies that could recognize watermelon silver mottle virus (WSMoV), capsicum chlorosis virus (CaCV) and melon yellow spot virus (MYSV). However, it did not react with specific monoclonal antibodies (MAbs) to WSMoV and CaCV or a specific MAb to MYSV. The complete nucleotide sequences of S and M RNAs of the virus were determined. They were 3,023 and 4,716 nucleotides in length, respectively, and contained two ORFs in an ambisense arrangement. Sequence analysis indicated that amino acid sequence of the N protein shared 58.2%, 56.0% and 51.8% identity with those of CaCV, WSMoV and MYSV, respectively. The virus was experimentally transmitted by Thrips palmi and Ceratothripoides claratris. Based on our results, we conclude that this tospovirus isolate should be considered a member of a new species. The name tomato necrotic ringspot virus (TNRV) is proposed for this tospovirus.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Antibodies</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Bunyaviridae Infections - transmission</subject><subject>Bunyaviridae Infections - virology</subject><subject>Capsicum</subject><subject>DNA Primers - genetics</subject><subject>Flowers & plants</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetically altered foods</subject><subject>Genomes</subject><subject>Infectious Diseases</subject><subject>Insect Vectors - virology</subject><subject>Lycopersicon esculentum</subject><subject>Lycopersicon esculentum - virology</subject><subject>Medical Microbiology</subject><subject>Melon yellow spot virus</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Morphology</subject><subject>Nucleocapsid Proteins - genetics</subject><subject>Nucleocapsid Proteins - immunology</subject><subject>Open Reading Frames</subject><subject>Original Article</subject><subject>Phylogeny</subject><subject>Phytopathology. Animal pests. Plant and forest protection</subject><subject>Plant Diseases - virology</subject><subject>Plant viruses and viroids</subject><subject>Proteins</subject><subject>RNA, Viral - genetics</subject><subject>Serology</subject><subject>Serotyping</subject><subject>Thailand</subject><subject>Thrips palmi</subject><subject>Tomatoes</subject><subject>Tospovirus</subject><subject>Tospovirus - classification</subject><subject>Tospovirus - genetics</subject><subject>Tospovirus - isolation & purification</subject><subject>Viral Proteins - genetics</subject><subject>Virology</subject><subject>Viruses</subject><subject>Watermelon silver mottle virus</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkU1P3DAQhi1UVLbQH8AFIqSKSwPjr9g-IsRHJSQOLGfLyTrUKBtv7QTEv2eWbIvUA1xsaeaZ1-P3JWSfwgkFUKcZD5AlUChBy6qELTKjgrNSK6O_kBlwEKWuQO-Qbzk_AmCBy69kh1EKgmk2IxfzuHRDLHrfpDiEpkihf8irOBRPIY35Z-Gw9VwMEWtvlSLk2LnBL4rQF_PfLnSuX-yR7dZ12X_f3Lvk_vJifn5d3txe_To_uykbydhQthxMq7kWQnnNBANduZpXktVGLTguXRtXe-oEZdj1pq11rbhyVVtRrqDiu-R40l2l-Gf0ebDLkBvf4Q4-jtmiCUpVQsrPSWEATWBr8ug_8jGOqcdvIKQlN8IIhOgEoUs5J9_aVQpLl14sBbvOwk5ZWMzCrrOwgDMHG-GxXvrFv4m_5iPwYwO43LiuTa5vQn7n0ChuJEWOTVxerdPx6X3Dj14_nIZaF617SCh8f8eAcqCGa4myrwZ4p2k</recordid><startdate>20110201</startdate><enddate>20110201</enddate><creator>Seepiban, Channarong</creator><creator>Gajanandana, Oraprapai</creator><creator>Attathom, Tipvadee</creator><creator>Attathom, Supat</creator><general>Vienna : Springer Vienna</general><general>Springer Vienna</general><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>7SS</scope></search><sort><creationdate>20110201</creationdate><title>Tomato necrotic ringspot virus, a new tospovirus isolated in Thailand</title><author>Seepiban, Channarong ; Gajanandana, Oraprapai ; Attathom, Tipvadee ; Attathom, Supat</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c522t-f309f838447e8242086ab3652b97d3879b9abe1a412242e9fb8b737a6f6137063</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Antibodies</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Bunyaviridae Infections - transmission</topic><topic>Bunyaviridae Infections - virology</topic><topic>Capsicum</topic><topic>DNA Primers - genetics</topic><topic>Flowers & plants</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetically altered foods</topic><topic>Genomes</topic><topic>Infectious Diseases</topic><topic>Insect Vectors - virology</topic><topic>Lycopersicon esculentum</topic><topic>Lycopersicon esculentum - virology</topic><topic>Medical Microbiology</topic><topic>Melon yellow spot virus</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Morphology</topic><topic>Nucleocapsid Proteins - genetics</topic><topic>Nucleocapsid Proteins - immunology</topic><topic>Open Reading Frames</topic><topic>Original Article</topic><topic>Phylogeny</topic><topic>Phytopathology. Animal pests. Plant and forest protection</topic><topic>Plant Diseases - virology</topic><topic>Plant viruses and viroids</topic><topic>Proteins</topic><topic>RNA, Viral - genetics</topic><topic>Serology</topic><topic>Serotyping</topic><topic>Thailand</topic><topic>Thrips palmi</topic><topic>Tomatoes</topic><topic>Tospovirus</topic><topic>Tospovirus - classification</topic><topic>Tospovirus - genetics</topic><topic>Tospovirus - isolation & purification</topic><topic>Viral Proteins - genetics</topic><topic>Virology</topic><topic>Viruses</topic><topic>Watermelon silver mottle virus</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Seepiban, Channarong</creatorcontrib><creatorcontrib>Gajanandana, Oraprapai</creatorcontrib><creatorcontrib>Attathom, Tipvadee</creatorcontrib><creatorcontrib>Attathom, Supat</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Entomology Abstracts (Full archive)</collection><jtitle>Archives of virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Seepiban, Channarong</au><au>Gajanandana, Oraprapai</au><au>Attathom, Tipvadee</au><au>Attathom, Supat</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Tomato necrotic ringspot virus, a new tospovirus isolated in Thailand</atitle><jtitle>Archives of virology</jtitle><stitle>Arch Virol</stitle><addtitle>Arch Virol</addtitle><date>2011-02-01</date><risdate>2011</risdate><volume>156</volume><issue>2</issue><spage>263</spage><epage>274</epage><pages>263-274</pages><issn>0304-8608</issn><eissn>1432-8798</eissn><abstract>A new tospovirus isolated from naturally infected tomato plants grown in Nakhon Pathom province (Thailand) was characterized. Infected plants showed symptoms consisting of necrotic spots, necrotic ringspots and stem necrosis. This virus was detected using general antibodies that could recognize watermelon silver mottle virus (WSMoV), capsicum chlorosis virus (CaCV) and melon yellow spot virus (MYSV). However, it did not react with specific monoclonal antibodies (MAbs) to WSMoV and CaCV or a specific MAb to MYSV. The complete nucleotide sequences of S and M RNAs of the virus were determined. They were 3,023 and 4,716 nucleotides in length, respectively, and contained two ORFs in an ambisense arrangement. Sequence analysis indicated that amino acid sequence of the N protein shared 58.2%, 56.0% and 51.8% identity with those of CaCV, WSMoV and MYSV, respectively. The virus was experimentally transmitted by Thrips palmi and Ceratothripoides claratris. Based on our results, we conclude that this tospovirus isolate should be considered a member of a new species. The name tomato necrotic ringspot virus (TNRV) is proposed for this tospovirus.</abstract><cop>Vienna</cop><pub>Vienna : Springer Vienna</pub><pmid>21104282</pmid><doi>10.1007/s00705-010-0856-0</doi><tpages>12</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Antibodies Base Sequence Biological and medical sciences Biomedical and Life Sciences Biomedicine Bunyaviridae Infections - transmission Bunyaviridae Infections - virology Capsicum DNA Primers - genetics Flowers & plants Fundamental and applied biological sciences. Psychology Genetically altered foods Genomes Infectious Diseases Insect Vectors - virology Lycopersicon esculentum Lycopersicon esculentum - virology Medical Microbiology Melon yellow spot virus Microbiology Miscellaneous Molecular Sequence Data Morphology Nucleocapsid Proteins - genetics Nucleocapsid Proteins - immunology Open Reading Frames Original Article Phylogeny Phytopathology. Animal pests. Plant and forest protection Plant Diseases - virology Plant viruses and viroids Proteins RNA, Viral - genetics Serology Serotyping Thailand Thrips palmi Tomatoes Tospovirus Tospovirus - classification Tospovirus - genetics Tospovirus - isolation & purification Viral Proteins - genetics Virology Viruses Watermelon silver mottle virus |
title | Tomato necrotic ringspot virus, a new tospovirus isolated in Thailand |
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