Human Norovirus RNA Persists in Seawater under Simulated Winter Conditions but Does Not Bioaccumulate Efficiently in Pacific Oysters (Crassostrea gigas)
Norovirus (NoV) is the principal agent of bivalve molluscan shellfish-associated gastroenteric illness worldwide. Currently, noncultivable human NoVs can be detected in bivalve molluscan shellfish by using molecular methods such as real-time reverse transcription PCR assays (qRT-PCR). In addition to...
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description | Norovirus (NoV) is the principal agent of bivalve molluscan shellfish-associated gastroenteric illness worldwide. Currently, noncultivable human NoVs can be detected in bivalve molluscan shellfish by using molecular methods such as real-time reverse transcription PCR assays (qRT-PCR). In addition to infectious viruses, this methodology may also detect noninfectious NoV, including fragments of the NoV genome. This study addresses, in part, the implications of qRT-PCR results for the detection of NoV in shellfish in the absence of an infectivity assay. To evaluate environmental persistence, the stability of a short fragment of the NoV genome, spanning the qRT-PCR target in the open reading frame 1/2 junction, was assessed in seawater under artificial environmental conditions simulating winter in the United Kingdom (1 mW/cm² UV irradiation, 8°C) during a 4-week period. Detectable RNA levels decreased exponentially (T₉₀ of approximately 141 h); however, sequences were still detectable for up to 2 weeks. The ability of Pacific oysters (Crassostrea gigas) to bioaccumulate NoV particles (from human feces) and RNA fragments was also compared using qRT-PCR. Oysters exposed to NoV particles subsequently were positive for NoV by qRT-PCR at levels several orders of magnitude in excess of the theoretical limit of detection, whereas oysters exposed to similar quantities of NoV RNA were either negative or positive at significantly lower levels. Therefore, although noninfectious fragments of NoV RNA may persist in the environment under winter conditions, this type of material will not be efficiently bioaccumulated by Pacific oysters and should not significantly contribute to positive qRT-PCR results. |
doi_str_mv | 10.4315/0362-028X-73.11.2123 |
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E ; LOWTHER, J. A ; LEES, D. N</creator><creatorcontrib>DANCER, D ; RANGDALE, R. E ; LOWTHER, J. A ; LEES, D. N</creatorcontrib><description>Norovirus (NoV) is the principal agent of bivalve molluscan shellfish-associated gastroenteric illness worldwide. Currently, noncultivable human NoVs can be detected in bivalve molluscan shellfish by using molecular methods such as real-time reverse transcription PCR assays (qRT-PCR). In addition to infectious viruses, this methodology may also detect noninfectious NoV, including fragments of the NoV genome. This study addresses, in part, the implications of qRT-PCR results for the detection of NoV in shellfish in the absence of an infectivity assay. To evaluate environmental persistence, the stability of a short fragment of the NoV genome, spanning the qRT-PCR target in the open reading frame 1/2 junction, was assessed in seawater under artificial environmental conditions simulating winter in the United Kingdom (1 mW/cm² UV irradiation, 8°C) during a 4-week period. Detectable RNA levels decreased exponentially (T₉₀ of approximately 141 h); however, sequences were still detectable for up to 2 weeks. The ability of Pacific oysters (Crassostrea gigas) to bioaccumulate NoV particles (from human feces) and RNA fragments was also compared using qRT-PCR. Oysters exposed to NoV particles subsequently were positive for NoV by qRT-PCR at levels several orders of magnitude in excess of the theoretical limit of detection, whereas oysters exposed to similar quantities of NoV RNA were either negative or positive at significantly lower levels. Therefore, although noninfectious fragments of NoV RNA may persist in the environment under winter conditions, this type of material will not be efficiently bioaccumulated by Pacific oysters and should not significantly contribute to positive qRT-PCR results.</description><identifier>ISSN: 0362-028X</identifier><identifier>EISSN: 1944-9097</identifier><identifier>DOI: 10.4315/0362-028X-73.11.2123</identifier><identifier>PMID: 21219729</identifier><identifier>CODEN: JFPRDR</identifier><language>eng</language><publisher>Des Moines, IA: International Association for Food Protection</publisher><subject>Animals ; Bioaccumulation ; Biological and medical sciences ; Bivalvia ; Consumer Product Safety ; Contamination ; Crassostrea - virology ; Crassostrea gigas ; Environmental conditions ; Enzymes ; Feces ; Fish and seafood industries ; Food Contamination - analysis ; Food industries ; Food microbiology ; Food safety ; Fundamental and applied biological sciences. Psychology ; Genomes ; Humans ; Irradiation ; Marine ; Mollusks ; Norovirus ; Norovirus - isolation & purification ; Norovirus - pathogenicity ; Oysters ; Plasmids ; Reverse Transcriptase Polymerase Chain Reaction ; Ribonucleic acid ; RNA ; RNA, Viral - analysis ; Seasons ; Seawater ; Seawater - virology ; Shellfish ; Shellfish - virology ; Ultraviolet radiation ; Virology ; Viruses</subject><ispartof>Journal of food protection, 2010-11, Vol.73 (11), p.2123-2127</ispartof><rights>2015 INIST-CNRS</rights><rights>Copyright International Association for Food Protection Nov 2010</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c441t-21f8f444bb2e4610a906b65b9ffb635b3fc6c4b5489ea0baeef6b6299205c3c13</citedby><cites>FETCH-LOGICAL-c441t-21f8f444bb2e4610a906b65b9ffb635b3fc6c4b5489ea0baeef6b6299205c3c13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/763130663?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,64385,64387,64389,72469</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23388120$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21219729$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>DANCER, D</creatorcontrib><creatorcontrib>RANGDALE, R. E</creatorcontrib><creatorcontrib>LOWTHER, J. A</creatorcontrib><creatorcontrib>LEES, D. N</creatorcontrib><title>Human Norovirus RNA Persists in Seawater under Simulated Winter Conditions but Does Not Bioaccumulate Efficiently in Pacific Oysters (Crassostrea gigas)</title><title>Journal of food protection</title><addtitle>J Food Prot</addtitle><description>Norovirus (NoV) is the principal agent of bivalve molluscan shellfish-associated gastroenteric illness worldwide. Currently, noncultivable human NoVs can be detected in bivalve molluscan shellfish by using molecular methods such as real-time reverse transcription PCR assays (qRT-PCR). In addition to infectious viruses, this methodology may also detect noninfectious NoV, including fragments of the NoV genome. This study addresses, in part, the implications of qRT-PCR results for the detection of NoV in shellfish in the absence of an infectivity assay. To evaluate environmental persistence, the stability of a short fragment of the NoV genome, spanning the qRT-PCR target in the open reading frame 1/2 junction, was assessed in seawater under artificial environmental conditions simulating winter in the United Kingdom (1 mW/cm² UV irradiation, 8°C) during a 4-week period. Detectable RNA levels decreased exponentially (T₉₀ of approximately 141 h); however, sequences were still detectable for up to 2 weeks. The ability of Pacific oysters (Crassostrea gigas) to bioaccumulate NoV particles (from human feces) and RNA fragments was also compared using qRT-PCR. Oysters exposed to NoV particles subsequently were positive for NoV by qRT-PCR at levels several orders of magnitude in excess of the theoretical limit of detection, whereas oysters exposed to similar quantities of NoV RNA were either negative or positive at significantly lower levels. Therefore, although noninfectious fragments of NoV RNA may persist in the environment under winter conditions, this type of material will not be efficiently bioaccumulated by Pacific oysters and should not significantly contribute to positive qRT-PCR results.</description><subject>Animals</subject><subject>Bioaccumulation</subject><subject>Biological and medical sciences</subject><subject>Bivalvia</subject><subject>Consumer Product Safety</subject><subject>Contamination</subject><subject>Crassostrea - virology</subject><subject>Crassostrea gigas</subject><subject>Environmental conditions</subject><subject>Enzymes</subject><subject>Feces</subject><subject>Fish and seafood industries</subject><subject>Food Contamination - analysis</subject><subject>Food industries</subject><subject>Food microbiology</subject><subject>Food safety</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genomes</subject><subject>Humans</subject><subject>Irradiation</subject><subject>Marine</subject><subject>Mollusks</subject><subject>Norovirus</subject><subject>Norovirus - isolation & purification</subject><subject>Norovirus - pathogenicity</subject><subject>Oysters</subject><subject>Plasmids</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA, Viral - analysis</subject><subject>Seasons</subject><subject>Seawater</subject><subject>Seawater - virology</subject><subject>Shellfish</subject><subject>Shellfish - virology</subject><subject>Ultraviolet radiation</subject><subject>Virology</subject><subject>Viruses</subject><issn>0362-028X</issn><issn>1944-9097</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNpdkV1rVDEQhoModlv9ByJBkOrFWfN1PnJZ12qF0har6F1IsklJOZu0mRNl_4k_1xx2reBNhsw88zLwIPSCkqXgtH1HeMcawoYfTc-XlC4ZZfwRWlApRCOJ7B-jxQNygA4BbgkhTLLuKTqoLJU9kwv0-6xsdMQXKaefIRfAXy5O8JXLEGACHCK-dvqXnlzGJa7rex02Zaz_Nf4e4txepbgOU0gRsCkT_pAc1LQJvw9JW1t2ND71Ptjg4jRu59ArbUNt4Mst1AzAb1ZZAySYstP4JtxoePsMPfF6BPd8X4_Qt4-nX1dnzfnlp8-rk_PGCkGnhlE_eCGEMcyJjhItSWe61kjvTcdbw73trDCtGKTTxGjnfJ0zKRlpLbeUH6HjXe5dTvfFwaQ2AawbRx1dKqCGloteDsNQyVf_kbep5FiPU33HKSddxyskdpDNCSA7r-5y2Oi8VZSo2ZuapahZiuq5olTN3uray312MRu3flj6K6oCr_eABqtHn3W0Af5xnA8DZYT_Ac6MoiI</recordid><startdate>20101101</startdate><enddate>20101101</enddate><creator>DANCER, D</creator><creator>RANGDALE, R. 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E</au><au>LOWTHER, J. A</au><au>LEES, D. N</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Human Norovirus RNA Persists in Seawater under Simulated Winter Conditions but Does Not Bioaccumulate Efficiently in Pacific Oysters (Crassostrea gigas)</atitle><jtitle>Journal of food protection</jtitle><addtitle>J Food Prot</addtitle><date>2010-11-01</date><risdate>2010</risdate><volume>73</volume><issue>11</issue><spage>2123</spage><epage>2127</epage><pages>2123-2127</pages><issn>0362-028X</issn><eissn>1944-9097</eissn><coden>JFPRDR</coden><abstract>Norovirus (NoV) is the principal agent of bivalve molluscan shellfish-associated gastroenteric illness worldwide. Currently, noncultivable human NoVs can be detected in bivalve molluscan shellfish by using molecular methods such as real-time reverse transcription PCR assays (qRT-PCR). In addition to infectious viruses, this methodology may also detect noninfectious NoV, including fragments of the NoV genome. This study addresses, in part, the implications of qRT-PCR results for the detection of NoV in shellfish in the absence of an infectivity assay. To evaluate environmental persistence, the stability of a short fragment of the NoV genome, spanning the qRT-PCR target in the open reading frame 1/2 junction, was assessed in seawater under artificial environmental conditions simulating winter in the United Kingdom (1 mW/cm² UV irradiation, 8°C) during a 4-week period. Detectable RNA levels decreased exponentially (T₉₀ of approximately 141 h); however, sequences were still detectable for up to 2 weeks. The ability of Pacific oysters (Crassostrea gigas) to bioaccumulate NoV particles (from human feces) and RNA fragments was also compared using qRT-PCR. Oysters exposed to NoV particles subsequently were positive for NoV by qRT-PCR at levels several orders of magnitude in excess of the theoretical limit of detection, whereas oysters exposed to similar quantities of NoV RNA were either negative or positive at significantly lower levels. Therefore, although noninfectious fragments of NoV RNA may persist in the environment under winter conditions, this type of material will not be efficiently bioaccumulated by Pacific oysters and should not significantly contribute to positive qRT-PCR results.</abstract><cop>Des Moines, IA</cop><pub>International Association for Food Protection</pub><pmid>21219729</pmid><doi>10.4315/0362-028X-73.11.2123</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Bioaccumulation Biological and medical sciences Bivalvia Consumer Product Safety Contamination Crassostrea - virology Crassostrea gigas Environmental conditions Enzymes Feces Fish and seafood industries Food Contamination - analysis Food industries Food microbiology Food safety Fundamental and applied biological sciences. Psychology Genomes Humans Irradiation Marine Mollusks Norovirus Norovirus - isolation & purification Norovirus - pathogenicity Oysters Plasmids Reverse Transcriptase Polymerase Chain Reaction Ribonucleic acid RNA RNA, Viral - analysis Seasons Seawater Seawater - virology Shellfish Shellfish - virology Ultraviolet radiation Virology Viruses |
title | Human Norovirus RNA Persists in Seawater under Simulated Winter Conditions but Does Not Bioaccumulate Efficiently in Pacific Oysters (Crassostrea gigas) |
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