genetic screen in Saccharomyces cerevisiae identifies new genes that interact with mex67-5, a temperature-sensitive allele of the gene encoding the mRNA export receptor
The Mex67p protein, together with Mtr2p, functions as the mRNA export receptor in Saccharomyces cerevisiae by interacting with both mRNA and nuclear pore complexes. To identify genes that interact functionally with MEX67, we used transposon insertion to search for mutations that suppressed the tempe...
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creator | Estruch, Francisco Peiró-Chova, Lorena Gómez-Navarro, Natalia Durbán, Jordi Hodge, Christine del Olmo, Marceŀlí Cole, Charles N |
description | The Mex67p protein, together with Mtr2p, functions as the mRNA export receptor in Saccharomyces cerevisiae by interacting with both mRNA and nuclear pore complexes. To identify genes that interact functionally with MEX67, we used transposon insertion to search for mutations that suppressed the temperature-sensitive mex67-5 allele. Four suppressors are described here. The screen revealed that mutant Mex67-5p, but not wild-type Mex67p, is a target of the nuclear protein quality control mediated by San1p, a ubiquitin-protein ligase that participates in degradation of aberrant chromatin-associated proteins. Our finding that overexpression of the SPT6 gene alleviates the growth defects of the mex67-5 strain, together with the impairment of poly(A)⁺ RNA export caused by depletion of Spt6p or the related protein Iws1p/Spn1p, supports the mechanism proposed in mammalian cells for Spt6-mediated co-transcriptional loading of mRNA export factors during transcription elongation. Finally, our results also uncovered genetic connections between Mex67p and the poly(A) nuclease complex and with components of chromatin boundary elements. |
doi_str_mv | 10.1007/s00438-008-0402-x |
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To identify genes that interact functionally with MEX67, we used transposon insertion to search for mutations that suppressed the temperature-sensitive mex67-5 allele. Four suppressors are described here. The screen revealed that mutant Mex67-5p, but not wild-type Mex67p, is a target of the nuclear protein quality control mediated by San1p, a ubiquitin-protein ligase that participates in degradation of aberrant chromatin-associated proteins. Our finding that overexpression of the SPT6 gene alleviates the growth defects of the mex67-5 strain, together with the impairment of poly(A)⁺ RNA export caused by depletion of Spt6p or the related protein Iws1p/Spn1p, supports the mechanism proposed in mammalian cells for Spt6-mediated co-transcriptional loading of mRNA export factors during transcription elongation. Finally, our results also uncovered genetic connections between Mex67p and the poly(A) nuclease complex and with components of chromatin boundary elements.</description><identifier>ISSN: 1617-4615</identifier><identifier>EISSN: 1617-4623</identifier><identifier>DOI: 10.1007/s00438-008-0402-x</identifier><identifier>PMID: 19034519</identifier><language>eng</language><publisher>Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Alleles ; Animal Genetics and Genomics ; Base Sequence ; Biochemistry ; Biomedical and Life Sciences ; Chromosomal Proteins, Non-Histone - genetics ; Chromosomal Proteins, Non-Histone - metabolism ; Cytoplasm ; DNA, Fungal - genetics ; Exoribonucleases - genetics ; Exoribonucleases - metabolism ; Gene Expression ; Genes ; Genes, Fungal ; Genomes ; Genomics ; Histone Chaperones ; Human Genetics ; Life Sciences ; Microbial Genetics and Genomics ; Models, Biological ; Mutagenesis, Insertional ; Mutation ; Nuclear Proteins - genetics ; Nuclear Proteins - metabolism ; Nucleocytoplasmic Transport Proteins - genetics ; Nucleocytoplasmic Transport Proteins - metabolism ; Original Paper ; Plant Genetics and Genomics ; Plasmids - genetics ; Proteins ; Quality control ; RNA, Fungal - metabolism ; RNA, Messenger - metabolism ; RNA-Binding Proteins - genetics ; RNA-Binding Proteins - metabolism ; Saccharomyces cerevisiae ; Saccharomyces cerevisiae - genetics ; Saccharomyces cerevisiae - growth & development ; Saccharomyces cerevisiae - metabolism ; Saccharomyces cerevisiae Proteins - genetics ; Saccharomyces cerevisiae Proteins - metabolism ; Temperature ; Transcriptional Elongation Factors ; Ubiquitin-Protein Ligases - genetics ; Ubiquitin-Protein Ligases - metabolism ; Yeast</subject><ispartof>Molecular genetics and genomics : MGG, 2009, Vol.281 (1), p.125-134</ispartof><rights>Springer-Verlag 2008</rights><rights>Springer-Verlag 2009</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c425t-a67d6095513eb8d5bcc368bbab7406e8bafe41db8f9f00f1ee2e5abacb1cd4ec3</citedby><cites>FETCH-LOGICAL-c425t-a67d6095513eb8d5bcc368bbab7406e8bafe41db8f9f00f1ee2e5abacb1cd4ec3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00438-008-0402-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00438-008-0402-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,4024,27923,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19034519$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Estruch, Francisco</creatorcontrib><creatorcontrib>Peiró-Chova, Lorena</creatorcontrib><creatorcontrib>Gómez-Navarro, Natalia</creatorcontrib><creatorcontrib>Durbán, Jordi</creatorcontrib><creatorcontrib>Hodge, Christine</creatorcontrib><creatorcontrib>del Olmo, Marceŀlí</creatorcontrib><creatorcontrib>Cole, Charles N</creatorcontrib><title>genetic screen in Saccharomyces cerevisiae identifies new genes that interact with mex67-5, a temperature-sensitive allele of the gene encoding the mRNA export receptor</title><title>Molecular genetics and genomics : MGG</title><addtitle>Mol Genet Genomics</addtitle><addtitle>Mol Genet Genomics</addtitle><description>The Mex67p protein, together with Mtr2p, functions as the mRNA export receptor in Saccharomyces cerevisiae by interacting with both mRNA and nuclear pore complexes. To identify genes that interact functionally with MEX67, we used transposon insertion to search for mutations that suppressed the temperature-sensitive mex67-5 allele. Four suppressors are described here. The screen revealed that mutant Mex67-5p, but not wild-type Mex67p, is a target of the nuclear protein quality control mediated by San1p, a ubiquitin-protein ligase that participates in degradation of aberrant chromatin-associated proteins. Our finding that overexpression of the SPT6 gene alleviates the growth defects of the mex67-5 strain, together with the impairment of poly(A)⁺ RNA export caused by depletion of Spt6p or the related protein Iws1p/Spn1p, supports the mechanism proposed in mammalian cells for Spt6-mediated co-transcriptional loading of mRNA export factors during transcription elongation. Finally, our results also uncovered genetic connections between Mex67p and the poly(A) nuclease complex and with components of chromatin boundary elements.</description><subject>Alleles</subject><subject>Animal Genetics and Genomics</subject><subject>Base Sequence</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Chromosomal Proteins, Non-Histone - genetics</subject><subject>Chromosomal Proteins, Non-Histone - metabolism</subject><subject>Cytoplasm</subject><subject>DNA, Fungal - genetics</subject><subject>Exoribonucleases - genetics</subject><subject>Exoribonucleases - metabolism</subject><subject>Gene Expression</subject><subject>Genes</subject><subject>Genes, Fungal</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Histone Chaperones</subject><subject>Human Genetics</subject><subject>Life Sciences</subject><subject>Microbial Genetics and Genomics</subject><subject>Models, Biological</subject><subject>Mutagenesis, Insertional</subject><subject>Mutation</subject><subject>Nuclear Proteins - genetics</subject><subject>Nuclear Proteins - metabolism</subject><subject>Nucleocytoplasmic Transport Proteins - genetics</subject><subject>Nucleocytoplasmic Transport Proteins - metabolism</subject><subject>Original Paper</subject><subject>Plant Genetics and Genomics</subject><subject>Plasmids - genetics</subject><subject>Proteins</subject><subject>Quality control</subject><subject>RNA, Fungal - metabolism</subject><subject>RNA, Messenger - metabolism</subject><subject>RNA-Binding Proteins - genetics</subject><subject>RNA-Binding Proteins - metabolism</subject><subject>Saccharomyces cerevisiae</subject><subject>Saccharomyces cerevisiae - genetics</subject><subject>Saccharomyces cerevisiae - growth & development</subject><subject>Saccharomyces cerevisiae - metabolism</subject><subject>Saccharomyces cerevisiae Proteins - genetics</subject><subject>Saccharomyces cerevisiae Proteins - metabolism</subject><subject>Temperature</subject><subject>Transcriptional Elongation Factors</subject><subject>Ubiquitin-Protein Ligases - 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genetics</topic><topic>Chromosomal Proteins, Non-Histone - metabolism</topic><topic>Cytoplasm</topic><topic>DNA, Fungal - genetics</topic><topic>Exoribonucleases - genetics</topic><topic>Exoribonucleases - metabolism</topic><topic>Gene Expression</topic><topic>Genes</topic><topic>Genes, Fungal</topic><topic>Genomes</topic><topic>Genomics</topic><topic>Histone Chaperones</topic><topic>Human Genetics</topic><topic>Life Sciences</topic><topic>Microbial Genetics and Genomics</topic><topic>Models, Biological</topic><topic>Mutagenesis, Insertional</topic><topic>Mutation</topic><topic>Nuclear Proteins - genetics</topic><topic>Nuclear Proteins - metabolism</topic><topic>Nucleocytoplasmic Transport Proteins - genetics</topic><topic>Nucleocytoplasmic Transport Proteins - metabolism</topic><topic>Original Paper</topic><topic>Plant Genetics and Genomics</topic><topic>Plasmids - genetics</topic><topic>Proteins</topic><topic>Quality control</topic><topic>RNA, Fungal - metabolism</topic><topic>RNA, Messenger - metabolism</topic><topic>RNA-Binding Proteins - genetics</topic><topic>RNA-Binding Proteins - metabolism</topic><topic>Saccharomyces cerevisiae</topic><topic>Saccharomyces cerevisiae - genetics</topic><topic>Saccharomyces cerevisiae - growth & development</topic><topic>Saccharomyces cerevisiae - metabolism</topic><topic>Saccharomyces cerevisiae Proteins - genetics</topic><topic>Saccharomyces cerevisiae Proteins - metabolism</topic><topic>Temperature</topic><topic>Transcriptional Elongation Factors</topic><topic>Ubiquitin-Protein Ligases - genetics</topic><topic>Ubiquitin-Protein Ligases - metabolism</topic><topic>Yeast</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Estruch, Francisco</creatorcontrib><creatorcontrib>Peiró-Chova, Lorena</creatorcontrib><creatorcontrib>Gómez-Navarro, Natalia</creatorcontrib><creatorcontrib>Durbán, Jordi</creatorcontrib><creatorcontrib>Hodge, Christine</creatorcontrib><creatorcontrib>del Olmo, Marceŀlí</creatorcontrib><creatorcontrib>Cole, Charles N</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><jtitle>Molecular genetics and genomics : MGG</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Estruch, Francisco</au><au>Peiró-Chova, Lorena</au><au>Gómez-Navarro, Natalia</au><au>Durbán, Jordi</au><au>Hodge, Christine</au><au>del Olmo, Marceŀlí</au><au>Cole, Charles N</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>genetic screen in Saccharomyces cerevisiae identifies new genes that interact with mex67-5, a temperature-sensitive allele of the gene encoding the mRNA export receptor</atitle><jtitle>Molecular genetics and genomics : MGG</jtitle><stitle>Mol Genet Genomics</stitle><addtitle>Mol Genet Genomics</addtitle><date>2009</date><risdate>2009</risdate><volume>281</volume><issue>1</issue><spage>125</spage><epage>134</epage><pages>125-134</pages><issn>1617-4615</issn><eissn>1617-4623</eissn><abstract>The Mex67p protein, together with Mtr2p, functions as the mRNA export receptor in Saccharomyces cerevisiae by interacting with both mRNA and nuclear pore complexes. To identify genes that interact functionally with MEX67, we used transposon insertion to search for mutations that suppressed the temperature-sensitive mex67-5 allele. Four suppressors are described here. The screen revealed that mutant Mex67-5p, but not wild-type Mex67p, is a target of the nuclear protein quality control mediated by San1p, a ubiquitin-protein ligase that participates in degradation of aberrant chromatin-associated proteins. Our finding that overexpression of the SPT6 gene alleviates the growth defects of the mex67-5 strain, together with the impairment of poly(A)⁺ RNA export caused by depletion of Spt6p or the related protein Iws1p/Spn1p, supports the mechanism proposed in mammalian cells for Spt6-mediated co-transcriptional loading of mRNA export factors during transcription elongation. Finally, our results also uncovered genetic connections between Mex67p and the poly(A) nuclease complex and with components of chromatin boundary elements.</abstract><cop>Berlin/Heidelberg</cop><pub>Berlin/Heidelberg : Springer-Verlag</pub><pmid>19034519</pmid><doi>10.1007/s00438-008-0402-x</doi><tpages>10</tpages></addata></record> |
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subjects | Alleles Animal Genetics and Genomics Base Sequence Biochemistry Biomedical and Life Sciences Chromosomal Proteins, Non-Histone - genetics Chromosomal Proteins, Non-Histone - metabolism Cytoplasm DNA, Fungal - genetics Exoribonucleases - genetics Exoribonucleases - metabolism Gene Expression Genes Genes, Fungal Genomes Genomics Histone Chaperones Human Genetics Life Sciences Microbial Genetics and Genomics Models, Biological Mutagenesis, Insertional Mutation Nuclear Proteins - genetics Nuclear Proteins - metabolism Nucleocytoplasmic Transport Proteins - genetics Nucleocytoplasmic Transport Proteins - metabolism Original Paper Plant Genetics and Genomics Plasmids - genetics Proteins Quality control RNA, Fungal - metabolism RNA, Messenger - metabolism RNA-Binding Proteins - genetics RNA-Binding Proteins - metabolism Saccharomyces cerevisiae Saccharomyces cerevisiae - genetics Saccharomyces cerevisiae - growth & development Saccharomyces cerevisiae - metabolism Saccharomyces cerevisiae Proteins - genetics Saccharomyces cerevisiae Proteins - metabolism Temperature Transcriptional Elongation Factors Ubiquitin-Protein Ligases - genetics Ubiquitin-Protein Ligases - metabolism Yeast |
title | genetic screen in Saccharomyces cerevisiae identifies new genes that interact with mex67-5, a temperature-sensitive allele of the gene encoding the mRNA export receptor |
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