Structure and Reactivity of the Cysteine Methyl Ester Radical Cation
The structure and reactivity of the cysteine methyl ester radical cation, CysOMe.+, have been examined in the gas phase using a combination of experiment and density functional theory (DFT) calculations. CysOMe.+ undergoes rapid ion–molecule reactions with dimethyl disulfide, allyl bromide, and ally...
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Veröffentlicht in: | Chemistry : a European journal 2011-01, Vol.17 (3), p.873-879 |
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description | The structure and reactivity of the cysteine methyl ester radical cation, CysOMe.+, have been examined in the gas phase using a combination of experiment and density functional theory (DFT) calculations. CysOMe.+ undergoes rapid ion–molecule reactions with dimethyl disulfide, allyl bromide, and allyl iodide, but is unreactive towards allyl chloride. These reactions proceed by radical atom or group transfer and are consistent with CysOMe.+ possessing structure 1, in which the radical site is located on the sulfur atom and the amino group is protonated. This contrasts with DFT calculations that predict a captodative structure 2, in which the radical site is positioned on the α carbon and the carbonyl group is protonated, and that is more stable than 1 by 13.0 kJ mol−1. To resolve this apparent discrepancy the gas‐phase IR spectrum of CysOMe.+ was experimentally determined and compared with the theoretically predicted IR spectra of a range of isomers. An excellent match was obtained for 1. DFT calculations highlight that although 1 is thermodynamically less stable than 2, it is kinetically stable with respect to rearrangement.
Structure and reactivity: The radical cation of cysteine methyl ester (see graphic) was prepared in the gas phase by dissociation of the protonated S‐nitrosylated precursor. A combination of infrared multiple‐photon dissociation (IRMPD) spectroscopy and ion–molecule reactions confirms that the radical remains on the sulfur atom (distonic S) and does not migrate to the more stable α‐carbon position (captodative) due to a high rearrangement barrier. |
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Structure and reactivity: The radical cation of cysteine methyl ester (see graphic) was prepared in the gas phase by dissociation of the protonated S‐nitrosylated precursor. A combination of infrared multiple‐photon dissociation (IRMPD) spectroscopy and ion–molecule reactions confirms that the radical remains on the sulfur atom (distonic S) and does not migrate to the more stable α‐carbon position (captodative) due to a high rearrangement barrier.</description><identifier>ISSN: 0947-6539</identifier><identifier>EISSN: 1521-3765</identifier><identifier>DOI: 10.1002/chem.201002042</identifier><identifier>PMID: 21226102</identifier><identifier>CODEN: CEUJED</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Atomic structure ; Carbon ; Cations ; Cations - chemistry ; Chemistry ; Computer Simulation ; Cysteine ; Cysteine - analogs & derivatives ; Cysteine - chemistry ; density functional calculations ; Dimethyl ; Esters ; gas-phase chemistry ; Gases - chemistry ; IR spectroscopy ; Isomerism ; Kinetics ; Mathematical analysis ; Molecular Structure ; radical ions ; Radicals ; Spectrophotometry, Infrared ; Tandem Mass Spectrometry - methods ; Thermodynamics</subject><ispartof>Chemistry : a European journal, 2011-01, Vol.17 (3), p.873-879</ispartof><rights>Copyright © 2011 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><rights>Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.</rights><rights>Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5092-ff6b79934984b325dffcc36684161a4531691e3685545f06ef93236c43fd49cd3</citedby><cites>FETCH-LOGICAL-c5092-ff6b79934984b325dffcc36684161a4531691e3685545f06ef93236c43fd49cd3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fchem.201002042$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fchem.201002042$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21226102$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Osburn, Sandra</creatorcontrib><creatorcontrib>Steill, Jeffrey D.</creatorcontrib><creatorcontrib>Oomens, Jos</creatorcontrib><creatorcontrib>O'Hair, Richard A. J.</creatorcontrib><creatorcontrib>van Stipdonk, Michael</creatorcontrib><creatorcontrib>Ryzhov, Victor</creatorcontrib><title>Structure and Reactivity of the Cysteine Methyl Ester Radical Cation</title><title>Chemistry : a European journal</title><addtitle>Chem. Eur. J</addtitle><description>The structure and reactivity of the cysteine methyl ester radical cation, CysOMe.+, have been examined in the gas phase using a combination of experiment and density functional theory (DFT) calculations. CysOMe.+ undergoes rapid ion–molecule reactions with dimethyl disulfide, allyl bromide, and allyl iodide, but is unreactive towards allyl chloride. These reactions proceed by radical atom or group transfer and are consistent with CysOMe.+ possessing structure 1, in which the radical site is located on the sulfur atom and the amino group is protonated. This contrasts with DFT calculations that predict a captodative structure 2, in which the radical site is positioned on the α carbon and the carbonyl group is protonated, and that is more stable than 1 by 13.0 kJ mol−1. To resolve this apparent discrepancy the gas‐phase IR spectrum of CysOMe.+ was experimentally determined and compared with the theoretically predicted IR spectra of a range of isomers. An excellent match was obtained for 1. DFT calculations highlight that although 1 is thermodynamically less stable than 2, it is kinetically stable with respect to rearrangement.
Structure and reactivity: The radical cation of cysteine methyl ester (see graphic) was prepared in the gas phase by dissociation of the protonated S‐nitrosylated precursor. A combination of infrared multiple‐photon dissociation (IRMPD) spectroscopy and ion–molecule reactions confirms that the radical remains on the sulfur atom (distonic S) and does not migrate to the more stable α‐carbon position (captodative) due to a high rearrangement barrier.</description><subject>Atomic structure</subject><subject>Carbon</subject><subject>Cations</subject><subject>Cations - chemistry</subject><subject>Chemistry</subject><subject>Computer Simulation</subject><subject>Cysteine</subject><subject>Cysteine - analogs & derivatives</subject><subject>Cysteine - chemistry</subject><subject>density functional calculations</subject><subject>Dimethyl</subject><subject>Esters</subject><subject>gas-phase chemistry</subject><subject>Gases - chemistry</subject><subject>IR spectroscopy</subject><subject>Isomerism</subject><subject>Kinetics</subject><subject>Mathematical analysis</subject><subject>Molecular Structure</subject><subject>radical ions</subject><subject>Radicals</subject><subject>Spectrophotometry, Infrared</subject><subject>Tandem Mass Spectrometry - methods</subject><subject>Thermodynamics</subject><issn>0947-6539</issn><issn>1521-3765</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1v1DAURS1ERactW5bIEgu6yeDnr8RLFIYpVVukFkR3lsexNS6ZpLUTIP8ej6YdIRaw8rN07pHeuwi9AjIHQug7u3abOSXbmXD6DM1AUChYKcVzNCOKl4UUTB2io5TuCCFKMvYCHVKgVAKhM_ThZoijHcbosOkafO2MHcKPMEy493hYO1xPaXChc_jSDeupxYv8jfjaNMGaFtdmCH13gg68aZN7-fgeo68fF1_qs-Li8_JT_f6isIIoWngvV6VSjKuKrxgVjffWMikrDhIMFwykAsdkJQQXnkjnFaNMWs58w5Vt2DF6u_Pex_5hdGnQm5Csa1vTuX5MumKqBAGEZ_L0nySUZUWoIhVk9M1f6F0_xi7vkSkpJUAFVabmO8rGPqXovL6PYWPipIHo7fX1tgm9byIHXj9qx9XGNXv86fQZUDvgZ2jd9B-drs8Wl3_Ki1025DZ-7bMmfteyZKXQ366WWXN-vrxit_qW_QbApaCx</recordid><startdate>20110117</startdate><enddate>20110117</enddate><creator>Osburn, Sandra</creator><creator>Steill, Jeffrey D.</creator><creator>Oomens, Jos</creator><creator>O'Hair, Richard A. J.</creator><creator>van Stipdonk, Michael</creator><creator>Ryzhov, Victor</creator><general>WILEY-VCH Verlag</general><general>WILEY‐VCH Verlag</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>K9.</scope><scope>7X8</scope></search><sort><creationdate>20110117</creationdate><title>Structure and Reactivity of the Cysteine Methyl Ester Radical Cation</title><author>Osburn, Sandra ; Steill, Jeffrey D. ; Oomens, Jos ; O'Hair, Richard A. J. ; van Stipdonk, Michael ; Ryzhov, Victor</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5092-ff6b79934984b325dffcc36684161a4531691e3685545f06ef93236c43fd49cd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Atomic structure</topic><topic>Carbon</topic><topic>Cations</topic><topic>Cations - chemistry</topic><topic>Chemistry</topic><topic>Computer Simulation</topic><topic>Cysteine</topic><topic>Cysteine - analogs & derivatives</topic><topic>Cysteine - chemistry</topic><topic>density functional calculations</topic><topic>Dimethyl</topic><topic>Esters</topic><topic>gas-phase chemistry</topic><topic>Gases - chemistry</topic><topic>IR spectroscopy</topic><topic>Isomerism</topic><topic>Kinetics</topic><topic>Mathematical analysis</topic><topic>Molecular Structure</topic><topic>radical ions</topic><topic>Radicals</topic><topic>Spectrophotometry, Infrared</topic><topic>Tandem Mass Spectrometry - methods</topic><topic>Thermodynamics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Osburn, Sandra</creatorcontrib><creatorcontrib>Steill, Jeffrey D.</creatorcontrib><creatorcontrib>Oomens, Jos</creatorcontrib><creatorcontrib>O'Hair, Richard A. J.</creatorcontrib><creatorcontrib>van Stipdonk, Michael</creatorcontrib><creatorcontrib>Ryzhov, Victor</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>MEDLINE - Academic</collection><jtitle>Chemistry : a European journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Osburn, Sandra</au><au>Steill, Jeffrey D.</au><au>Oomens, Jos</au><au>O'Hair, Richard A. J.</au><au>van Stipdonk, Michael</au><au>Ryzhov, Victor</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structure and Reactivity of the Cysteine Methyl Ester Radical Cation</atitle><jtitle>Chemistry : a European journal</jtitle><addtitle>Chem. Eur. J</addtitle><date>2011-01-17</date><risdate>2011</risdate><volume>17</volume><issue>3</issue><spage>873</spage><epage>879</epage><pages>873-879</pages><issn>0947-6539</issn><eissn>1521-3765</eissn><coden>CEUJED</coden><abstract>The structure and reactivity of the cysteine methyl ester radical cation, CysOMe.+, have been examined in the gas phase using a combination of experiment and density functional theory (DFT) calculations. CysOMe.+ undergoes rapid ion–molecule reactions with dimethyl disulfide, allyl bromide, and allyl iodide, but is unreactive towards allyl chloride. These reactions proceed by radical atom or group transfer and are consistent with CysOMe.+ possessing structure 1, in which the radical site is located on the sulfur atom and the amino group is protonated. This contrasts with DFT calculations that predict a captodative structure 2, in which the radical site is positioned on the α carbon and the carbonyl group is protonated, and that is more stable than 1 by 13.0 kJ mol−1. To resolve this apparent discrepancy the gas‐phase IR spectrum of CysOMe.+ was experimentally determined and compared with the theoretically predicted IR spectra of a range of isomers. An excellent match was obtained for 1. DFT calculations highlight that although 1 is thermodynamically less stable than 2, it is kinetically stable with respect to rearrangement.
Structure and reactivity: The radical cation of cysteine methyl ester (see graphic) was prepared in the gas phase by dissociation of the protonated S‐nitrosylated precursor. A combination of infrared multiple‐photon dissociation (IRMPD) spectroscopy and ion–molecule reactions confirms that the radical remains on the sulfur atom (distonic S) and does not migrate to the more stable α‐carbon position (captodative) due to a high rearrangement barrier.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><pmid>21226102</pmid><doi>10.1002/chem.201002042</doi><tpages>7</tpages></addata></record> |
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subjects | Atomic structure Carbon Cations Cations - chemistry Chemistry Computer Simulation Cysteine Cysteine - analogs & derivatives Cysteine - chemistry density functional calculations Dimethyl Esters gas-phase chemistry Gases - chemistry IR spectroscopy Isomerism Kinetics Mathematical analysis Molecular Structure radical ions Radicals Spectrophotometry, Infrared Tandem Mass Spectrometry - methods Thermodynamics |
title | Structure and Reactivity of the Cysteine Methyl Ester Radical Cation |
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