Factors Associated with Differences between Conventional Contact Tracing and Molecular Epidemiology in Study of Tuberculosis Transmission and Analysis in the City of Barcelona, Spain

The aim of this study was to analyze the factors associated with conventional contact tracing (CCT) and molecular epidemiology (ME) methods in assessing tuberculosis (TB) transmission, comparing the populations studied and the epidemiological links established by both methods. Data were obtained fro...

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Veröffentlicht in:Journal of Clinical Microbiology 2009-01, Vol.47 (1), p.198-204
Hauptverfasser: Borrell, Sònia, Español, Montserrat, Orcau, Àngels, Tudó, Griselda, March, Francesca, Caylà, Joan A, Jansà, Josep Maria, Alcaide, Fernando, Martín-Casabona, Núria, Salvadó, Margarita, Martínez, José Antonio, Vidal, Rafael, Sánchez, Francesca, Altet, Neus, Coll, Pere, González-Martín, Juliàn
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container_issue 1
container_start_page 198
container_title Journal of Clinical Microbiology
container_volume 47
creator Borrell, Sònia
Español, Montserrat
Orcau, Àngels
Tudó, Griselda
March, Francesca
Caylà, Joan A
Jansà, Josep Maria
Alcaide, Fernando
Martín-Casabona, Núria
Salvadó, Margarita
Martínez, José Antonio
Vidal, Rafael
Sánchez, Francesca
Altet, Neus
Coll, Pere
González-Martín, Juliàn
description The aim of this study was to analyze the factors associated with conventional contact tracing (CCT) and molecular epidemiology (ME) methods in assessing tuberculosis (TB) transmission, comparing the populations studied and the epidemiological links established by both methods. Data were obtained from TB case and CCT registries, and ME was performed using IS6110-based restriction fragment length polymorphism (RFLP) analysis and mycobacterial interspersed repetitive unit 12 (MIRU12) typing as a secondary typing method. During two years (2003 and 2004), 892 cases of TB were reported, of which 687 (77%) were confirmed by culture. RFLP analysis was performed with 463 (67.4%) of the 687 isolated strains, and MIRU12 types in 75 strains were evaluated; 280 strains (60.5%) had a unique RFLP pattern, and 183 (39.5%) shared patterns, grouping into 65 clusters. CCT of 613 (68.7%) of 892 cases detected 44 clusters involving 101 patients. The results of both CCT and ME methods yielded 96 clusters involving 255 patients. The household link was the one most frequently identified by CCT (corresponding to 80.7% of the cases clustered by this method), whereas nonhousehold and unknown links were associated with 94.1% of the strains clustered by ME. When both methods were used in 351 cases (39.3%), they showed the same results in 214 cases (61%). Of the remainder, 106 (30.2%) were clustered only by ME, 19 (5.5%) were clustered only by CCT, and 12 (3.4%) were clustered by both methods but into different clusters. Patients with factors potentially associated with social problems were less frequently studied by CCT (P = 0.002), whereas patients of
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Data were obtained from TB case and CCT registries, and ME was performed using IS6110-based restriction fragment length polymorphism (RFLP) analysis and mycobacterial interspersed repetitive unit 12 (MIRU12) typing as a secondary typing method. During two years (2003 and 2004), 892 cases of TB were reported, of which 687 (77%) were confirmed by culture. RFLP analysis was performed with 463 (67.4%) of the 687 isolated strains, and MIRU12 types in 75 strains were evaluated; 280 strains (60.5%) had a unique RFLP pattern, and 183 (39.5%) shared patterns, grouping into 65 clusters. CCT of 613 (68.7%) of 892 cases detected 44 clusters involving 101 patients. The results of both CCT and ME methods yielded 96 clusters involving 255 patients. The household link was the one most frequently identified by CCT (corresponding to 80.7% of the cases clustered by this method), whereas nonhousehold and unknown links were associated with 94.1% of the strains clustered by ME. When both methods were used in 351 cases (39.3%), they showed the same results in 214 cases (61%). Of the remainder, 106 (30.2%) were clustered only by ME, 19 (5.5%) were clustered only by CCT, and 12 (3.4%) were clustered by both methods but into different clusters. Patients with factors potentially associated with social problems were less frequently studied by CCT (P = 0.002), whereas patients of &lt;15 years of age, most with negative cultures, were less frequently studied by ME (P = 0.005). Significant differences in the populations studied by ME versus CCT were observed, possibly explaining the scarce correlation found between the results of these methods. Moreover, ME allowed the detection of nonhousehold contact relationships, whereas CCT was more useful for tracing transmission chains involving patients of &lt;15 years of age. 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Psychology ; Genotype ; Humans ; Male ; Microbiology ; Middle Aged ; Molecular Epidemiology ; Mycobacterium ; Mycobacterium tuberculosis - genetics ; Mycobacterium tuberculosis - isolation &amp; purification ; Polymorphism, Restriction Fragment Length ; Spain - epidemiology ; Tuberculosis - epidemiology ; Tuberculosis - transmission</subject><ispartof>Journal of Clinical Microbiology, 2009-01, Vol.47 (1), p.198-204</ispartof><rights>2009 INIST-CNRS</rights><rights>Copyright © 2009, American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c493t-5a758004fa35b112b13acb941b6801c7764665dee030525b97520f74b69ea4c3</citedby><cites>FETCH-LOGICAL-c493t-5a758004fa35b112b13acb941b6801c7764665dee030525b97520f74b69ea4c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2620856/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2620856/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3175,3176,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=21171630$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19020067$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Borrell, Sònia</creatorcontrib><creatorcontrib>Español, Montserrat</creatorcontrib><creatorcontrib>Orcau, Àngels</creatorcontrib><creatorcontrib>Tudó, Griselda</creatorcontrib><creatorcontrib>March, Francesca</creatorcontrib><creatorcontrib>Caylà, Joan A</creatorcontrib><creatorcontrib>Jansà, Josep Maria</creatorcontrib><creatorcontrib>Alcaide, Fernando</creatorcontrib><creatorcontrib>Martín-Casabona, Núria</creatorcontrib><creatorcontrib>Salvadó, Margarita</creatorcontrib><creatorcontrib>Martínez, José Antonio</creatorcontrib><creatorcontrib>Vidal, Rafael</creatorcontrib><creatorcontrib>Sánchez, Francesca</creatorcontrib><creatorcontrib>Altet, Neus</creatorcontrib><creatorcontrib>Coll, Pere</creatorcontrib><creatorcontrib>González-Martín, Juliàn</creatorcontrib><title>Factors Associated with Differences between Conventional Contact Tracing and Molecular Epidemiology in Study of Tuberculosis Transmission and Analysis in the City of Barcelona, Spain</title><title>Journal of Clinical Microbiology</title><addtitle>J Clin Microbiol</addtitle><description>The aim of this study was to analyze the factors associated with conventional contact tracing (CCT) and molecular epidemiology (ME) methods in assessing tuberculosis (TB) transmission, comparing the populations studied and the epidemiological links established by both methods. Data were obtained from TB case and CCT registries, and ME was performed using IS6110-based restriction fragment length polymorphism (RFLP) analysis and mycobacterial interspersed repetitive unit 12 (MIRU12) typing as a secondary typing method. During two years (2003 and 2004), 892 cases of TB were reported, of which 687 (77%) were confirmed by culture. RFLP analysis was performed with 463 (67.4%) of the 687 isolated strains, and MIRU12 types in 75 strains were evaluated; 280 strains (60.5%) had a unique RFLP pattern, and 183 (39.5%) shared patterns, grouping into 65 clusters. CCT of 613 (68.7%) of 892 cases detected 44 clusters involving 101 patients. The results of both CCT and ME methods yielded 96 clusters involving 255 patients. The household link was the one most frequently identified by CCT (corresponding to 80.7% of the cases clustered by this method), whereas nonhousehold and unknown links were associated with 94.1% of the strains clustered by ME. When both methods were used in 351 cases (39.3%), they showed the same results in 214 cases (61%). Of the remainder, 106 (30.2%) were clustered only by ME, 19 (5.5%) were clustered only by CCT, and 12 (3.4%) were clustered by both methods but into different clusters. Patients with factors potentially associated with social problems were less frequently studied by CCT (P = 0.002), whereas patients of &lt;15 years of age, most with negative cultures, were less frequently studied by ME (P = 0.005). Significant differences in the populations studied by ME versus CCT were observed, possibly explaining the scarce correlation found between the results of these methods. Moreover, ME allowed the detection of nonhousehold contact relationships, whereas CCT was more useful for tracing transmission chains involving patients of &lt;15 years of age. 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Psychology</subject><subject>Genotype</subject><subject>Humans</subject><subject>Male</subject><subject>Microbiology</subject><subject>Middle Aged</subject><subject>Molecular Epidemiology</subject><subject>Mycobacterium</subject><subject>Mycobacterium tuberculosis - genetics</subject><subject>Mycobacterium tuberculosis - isolation &amp; purification</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Spain - epidemiology</subject><subject>Tuberculosis - epidemiology</subject><subject>Tuberculosis - transmission</subject><issn>0095-1137</issn><issn>1098-660X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kktv1DAUhSMEotPCjjV4A2yacp34kWyQhqHloVYsZpDYWY7jzLhK7KntdDR_rL8Pz0MFNqwsy98518c-WfYKwwXGRfXh--zmAoACz6F6kk0w1FXOGPx6mk0AappjXPKT7DSEWwBMCKXPsxNcQwHA-CR7uJIqOh_QNASnjIy6RRsTV-iz6TrttVU6oEbHjdYWzZy91zYaZ2W_28SkRQsvlbFLJG2Lblyv1dhLjy7XptWDcb1bbpGxaB7HdotchxZjo31iXDBhp7VhMCEky73BNDlvdydJElcazUzcqz5Jr3Sf5p6j-Voa-yJ71sk-6JfH9SxbXF0uZl_z6x9fvs2m17kidRlzKjmtAEgnS9qk12pwKVVTE9ywCrDinBHGaKs1lEAL2tScFtBx0rBaS6LKs-zjwXY9NoNuVQrvZS_W3gzSb4WTRvx7Ys1KLN29KFgBFWXJ4P3RwLu7UYcoUtqUpJdWuzGIqqxZhUlJEvnuvyRjvGKc8ASeH0DlXQhed4_XwSB2jRCpEWLfCAFVwl__HeEPfKxAAt4eARmU7Lv0JcqER67AmGNWQuLQgVuZ5WpjvBYyDOJWDYJwgZPfbtabA9JJJ-TSJ5uf8wJwCZhyygta_gbDa9Xc</recordid><startdate>20090101</startdate><enddate>20090101</enddate><creator>Borrell, Sònia</creator><creator>Español, Montserrat</creator><creator>Orcau, Àngels</creator><creator>Tudó, Griselda</creator><creator>March, Francesca</creator><creator>Caylà, Joan A</creator><creator>Jansà, Josep Maria</creator><creator>Alcaide, Fernando</creator><creator>Martín-Casabona, Núria</creator><creator>Salvadó, Margarita</creator><creator>Martínez, José Antonio</creator><creator>Vidal, Rafael</creator><creator>Sánchez, Francesca</creator><creator>Altet, Neus</creator><creator>Coll, Pere</creator><creator>González-Martín, Juliàn</creator><general>American Society for Microbiology</general><general>American Society for Microbiology (ASM)</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>C1K</scope><scope>5PM</scope></search><sort><creationdate>20090101</creationdate><title>Factors Associated with Differences between Conventional Contact Tracing and Molecular Epidemiology in Study of Tuberculosis Transmission and Analysis in the City of Barcelona, Spain</title><author>Borrell, Sònia ; Español, Montserrat ; Orcau, Àngels ; Tudó, Griselda ; March, Francesca ; Caylà, Joan A ; Jansà, Josep Maria ; Alcaide, Fernando ; Martín-Casabona, Núria ; Salvadó, Margarita ; Martínez, José Antonio ; Vidal, Rafael ; Sánchez, Francesca ; Altet, Neus ; Coll, Pere ; González-Martín, Juliàn</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c493t-5a758004fa35b112b13acb941b6801c7764665dee030525b97520f74b69ea4c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Bacterial Typing Techniques</topic><topic>Biological and medical sciences</topic><topic>Cluster Analysis</topic><topic>Contact Tracing</topic><topic>DNA Fingerprinting</topic><topic>Epidemiology</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genotype</topic><topic>Humans</topic><topic>Male</topic><topic>Microbiology</topic><topic>Middle Aged</topic><topic>Molecular Epidemiology</topic><topic>Mycobacterium</topic><topic>Mycobacterium tuberculosis - genetics</topic><topic>Mycobacterium tuberculosis - isolation &amp; purification</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Spain - epidemiology</topic><topic>Tuberculosis - epidemiology</topic><topic>Tuberculosis - transmission</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Borrell, Sònia</creatorcontrib><creatorcontrib>Español, Montserrat</creatorcontrib><creatorcontrib>Orcau, Àngels</creatorcontrib><creatorcontrib>Tudó, Griselda</creatorcontrib><creatorcontrib>March, Francesca</creatorcontrib><creatorcontrib>Caylà, Joan A</creatorcontrib><creatorcontrib>Jansà, Josep Maria</creatorcontrib><creatorcontrib>Alcaide, Fernando</creatorcontrib><creatorcontrib>Martín-Casabona, Núria</creatorcontrib><creatorcontrib>Salvadó, Margarita</creatorcontrib><creatorcontrib>Martínez, José Antonio</creatorcontrib><creatorcontrib>Vidal, Rafael</creatorcontrib><creatorcontrib>Sánchez, Francesca</creatorcontrib><creatorcontrib>Altet, Neus</creatorcontrib><creatorcontrib>Coll, Pere</creatorcontrib><creatorcontrib>González-Martín, Juliàn</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of Clinical Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Borrell, Sònia</au><au>Español, Montserrat</au><au>Orcau, Àngels</au><au>Tudó, Griselda</au><au>March, Francesca</au><au>Caylà, Joan A</au><au>Jansà, Josep Maria</au><au>Alcaide, Fernando</au><au>Martín-Casabona, Núria</au><au>Salvadó, Margarita</au><au>Martínez, José Antonio</au><au>Vidal, Rafael</au><au>Sánchez, Francesca</au><au>Altet, Neus</au><au>Coll, Pere</au><au>González-Martín, Juliàn</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Factors Associated with Differences between Conventional Contact Tracing and Molecular Epidemiology in Study of Tuberculosis Transmission and Analysis in the City of Barcelona, Spain</atitle><jtitle>Journal of Clinical Microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2009-01-01</date><risdate>2009</risdate><volume>47</volume><issue>1</issue><spage>198</spage><epage>204</epage><pages>198-204</pages><issn>0095-1137</issn><eissn>1098-660X</eissn><coden>JCMIDW</coden><abstract>The aim of this study was to analyze the factors associated with conventional contact tracing (CCT) and molecular epidemiology (ME) methods in assessing tuberculosis (TB) transmission, comparing the populations studied and the epidemiological links established by both methods. Data were obtained from TB case and CCT registries, and ME was performed using IS6110-based restriction fragment length polymorphism (RFLP) analysis and mycobacterial interspersed repetitive unit 12 (MIRU12) typing as a secondary typing method. During two years (2003 and 2004), 892 cases of TB were reported, of which 687 (77%) were confirmed by culture. RFLP analysis was performed with 463 (67.4%) of the 687 isolated strains, and MIRU12 types in 75 strains were evaluated; 280 strains (60.5%) had a unique RFLP pattern, and 183 (39.5%) shared patterns, grouping into 65 clusters. CCT of 613 (68.7%) of 892 cases detected 44 clusters involving 101 patients. The results of both CCT and ME methods yielded 96 clusters involving 255 patients. The household link was the one most frequently identified by CCT (corresponding to 80.7% of the cases clustered by this method), whereas nonhousehold and unknown links were associated with 94.1% of the strains clustered by ME. When both methods were used in 351 cases (39.3%), they showed the same results in 214 cases (61%). Of the remainder, 106 (30.2%) were clustered only by ME, 19 (5.5%) were clustered only by CCT, and 12 (3.4%) were clustered by both methods but into different clusters. Patients with factors potentially associated with social problems were less frequently studied by CCT (P = 0.002), whereas patients of &lt;15 years of age, most with negative cultures, were less frequently studied by ME (P = 0.005). Significant differences in the populations studied by ME versus CCT were observed, possibly explaining the scarce correlation found between the results of these methods. Moreover, ME allowed the detection of nonhousehold contact relationships, whereas CCT was more useful for tracing transmission chains involving patients of &lt;15 years of age. In conclusion, the two methods are complementary, suggesting the need to improve the methodology of contact study protocols.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>19020067</pmid><doi>10.1128/JCM.00507-08</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record>
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source American Society for Microbiology; MEDLINE; EZB-FREE-00999 freely available EZB journals; PubMed Central
subjects Adolescent
Adult
Aged
Aged, 80 and over
Bacterial Typing Techniques
Biological and medical sciences
Cluster Analysis
Contact Tracing
DNA Fingerprinting
Epidemiology
Female
Fundamental and applied biological sciences. Psychology
Genotype
Humans
Male
Microbiology
Middle Aged
Molecular Epidemiology
Mycobacterium
Mycobacterium tuberculosis - genetics
Mycobacterium tuberculosis - isolation & purification
Polymorphism, Restriction Fragment Length
Spain - epidemiology
Tuberculosis - epidemiology
Tuberculosis - transmission
title Factors Associated with Differences between Conventional Contact Tracing and Molecular Epidemiology in Study of Tuberculosis Transmission and Analysis in the City of Barcelona, Spain
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