Topology modification for surgical simulation using precomputed finite element models based on linear elasticity
Surgical simulators provide another tool for training and practising surgical procedures, usually restricted to the use of cadavers. Our surgical simulator utilises Finite Element (FE) models based on linear elasticity. It is driven by displacements, as opposed to forces, allowing for realistic simu...
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Veröffentlicht in: | Progress in biophysics and molecular biology 2010-12, Vol.103 (2), p.236-251 |
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creator | Lee, Bryan Popescu, Dan C. Ourselin, Sébastien |
description | Surgical simulators provide another tool for training and practising surgical procedures, usually restricted to the use of cadavers. Our surgical simulator utilises Finite Element (FE) models based on linear elasticity. It is driven by displacements, as opposed to forces, allowing for realistic simulation of both deformation and haptic response at real-time rates. To achieve demanding computational requirements, the stiffness matrix
K, which encompasses the geometrical and physical properties of the object, is precomputed, along with
K
−1. Common to many surgical procedures is the requirement of cutting tissue. Introducing topology modifications, such as cutting, into these precomputed schemes does however come as a challenge, as the precomputed data needs to be modified, to reflect the new topology. In particular, recomputing
K
−1 is too costly to be performed during the simulation. Our topology modification method is based upon updating
K
−1 rather than entirely recomputing the matrix. By integrating condensation, we improve efficiency to allow for interaction with larger models. We can further enhance this by redistributing computational load to improve the system’s real-time response. We exemplify our techniques with results from our surgical simulation system. |
doi_str_mv | 10.1016/j.pbiomolbio.2010.09.011 |
format | Article |
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K, which encompasses the geometrical and physical properties of the object, is precomputed, along with
K
−1. Common to many surgical procedures is the requirement of cutting tissue. Introducing topology modifications, such as cutting, into these precomputed schemes does however come as a challenge, as the precomputed data needs to be modified, to reflect the new topology. In particular, recomputing
K
−1 is too costly to be performed during the simulation. Our topology modification method is based upon updating
K
−1 rather than entirely recomputing the matrix. By integrating condensation, we improve efficiency to allow for interaction with larger models. We can further enhance this by redistributing computational load to improve the system’s real-time response. We exemplify our techniques with results from our surgical simulation system.</description><identifier>ISSN: 0079-6107</identifier><identifier>EISSN: 1873-1732</identifier><identifier>DOI: 10.1016/j.pbiomolbio.2010.09.011</identifier><identifier>PMID: 20920518</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Biomechanical Phenomena ; Computer Simulation ; Condensation ; Cutting ; Elasticity ; Finite Element Analysis ; Finite element method ; Haptics ; Humans ; Models, Biological ; Real-time ; Stress, Mechanical ; Surgical Procedures, Operative ; Surgical simulation ; Topology modification ; User-Computer Interface</subject><ispartof>Progress in biophysics and molecular biology, 2010-12, Vol.103 (2), p.236-251</ispartof><rights>2010</rights><rights>Crown Copyright © 2010. Published by Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c373t-c76c058e8f2ea6b1bde1d19953bb51211804f502ff08c10b2de57b7cb9f1a12d3</citedby><cites>FETCH-LOGICAL-c373t-c76c058e8f2ea6b1bde1d19953bb51211804f502ff08c10b2de57b7cb9f1a12d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0079610710000799$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20920518$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Bryan</creatorcontrib><creatorcontrib>Popescu, Dan C.</creatorcontrib><creatorcontrib>Ourselin, Sébastien</creatorcontrib><title>Topology modification for surgical simulation using precomputed finite element models based on linear elasticity</title><title>Progress in biophysics and molecular biology</title><addtitle>Prog Biophys Mol Biol</addtitle><description>Surgical simulators provide another tool for training and practising surgical procedures, usually restricted to the use of cadavers. Our surgical simulator utilises Finite Element (FE) models based on linear elasticity. It is driven by displacements, as opposed to forces, allowing for realistic simulation of both deformation and haptic response at real-time rates. To achieve demanding computational requirements, the stiffness matrix
K, which encompasses the geometrical and physical properties of the object, is precomputed, along with
K
−1. Common to many surgical procedures is the requirement of cutting tissue. Introducing topology modifications, such as cutting, into these precomputed schemes does however come as a challenge, as the precomputed data needs to be modified, to reflect the new topology. In particular, recomputing
K
−1 is too costly to be performed during the simulation. Our topology modification method is based upon updating
K
−1 rather than entirely recomputing the matrix. By integrating condensation, we improve efficiency to allow for interaction with larger models. We can further enhance this by redistributing computational load to improve the system’s real-time response. We exemplify our techniques with results from our surgical simulation system.</description><subject>Biomechanical Phenomena</subject><subject>Computer Simulation</subject><subject>Condensation</subject><subject>Cutting</subject><subject>Elasticity</subject><subject>Finite Element Analysis</subject><subject>Finite element method</subject><subject>Haptics</subject><subject>Humans</subject><subject>Models, Biological</subject><subject>Real-time</subject><subject>Stress, Mechanical</subject><subject>Surgical Procedures, Operative</subject><subject>Surgical simulation</subject><subject>Topology modification</subject><subject>User-Computer Interface</subject><issn>0079-6107</issn><issn>1873-1732</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE9v1DAQxS0EokvpV0C5ccoy4zSxc4SKFqRKXMrZ8p_xyisnDnaCtN8er7aFI5cZzcx7b6QfYw3CHgGHT8f9YkKaUqx1z6GuYdwD4iu2Qym6FkXHX7MdgBjbAUFcsXelHAGAoxjesisOI4ce5Y4tT2lJMR1OzZRc8MHqNaS58Sk3ZcuHOsemhGmLl_1Wwnxolkw2Tcu2kmt8mMNKDUWaaF7PKRRLY3Spt2qIYSad61mXNdiwnt6zN17HQjfP_Zr9vP_6dPetffzx8P3u82NrO9GtrRWDhV6S9Jz0YNA4Qofj2HfG9MgRJdz6Hrj3IC2C4Y56YYQ1o0eN3HXX7OMld8np10ZlVVMolmLUM6WtKIlDJwUXsirlRWlzKiWTV0sOk84nhaDOuNVR_cOtzrgVjKrirtYPz082M5H7a3zhWwVfLoIKhX4HyqrYQLMlFyrDVbkU_v_lD4N-mY8</recordid><startdate>20101201</startdate><enddate>20101201</enddate><creator>Lee, Bryan</creator><creator>Popescu, Dan C.</creator><creator>Ourselin, Sébastien</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20101201</creationdate><title>Topology modification for surgical simulation using precomputed finite element models based on linear elasticity</title><author>Lee, Bryan ; Popescu, Dan C. ; Ourselin, Sébastien</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c373t-c76c058e8f2ea6b1bde1d19953bb51211804f502ff08c10b2de57b7cb9f1a12d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Biomechanical Phenomena</topic><topic>Computer Simulation</topic><topic>Condensation</topic><topic>Cutting</topic><topic>Elasticity</topic><topic>Finite Element Analysis</topic><topic>Finite element method</topic><topic>Haptics</topic><topic>Humans</topic><topic>Models, Biological</topic><topic>Real-time</topic><topic>Stress, Mechanical</topic><topic>Surgical Procedures, Operative</topic><topic>Surgical simulation</topic><topic>Topology modification</topic><topic>User-Computer Interface</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Bryan</creatorcontrib><creatorcontrib>Popescu, Dan C.</creatorcontrib><creatorcontrib>Ourselin, Sébastien</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Progress in biophysics and molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Bryan</au><au>Popescu, Dan C.</au><au>Ourselin, Sébastien</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Topology modification for surgical simulation using precomputed finite element models based on linear elasticity</atitle><jtitle>Progress in biophysics and molecular biology</jtitle><addtitle>Prog Biophys Mol Biol</addtitle><date>2010-12-01</date><risdate>2010</risdate><volume>103</volume><issue>2</issue><spage>236</spage><epage>251</epage><pages>236-251</pages><issn>0079-6107</issn><eissn>1873-1732</eissn><abstract>Surgical simulators provide another tool for training and practising surgical procedures, usually restricted to the use of cadavers. Our surgical simulator utilises Finite Element (FE) models based on linear elasticity. It is driven by displacements, as opposed to forces, allowing for realistic simulation of both deformation and haptic response at real-time rates. To achieve demanding computational requirements, the stiffness matrix
K, which encompasses the geometrical and physical properties of the object, is precomputed, along with
K
−1. Common to many surgical procedures is the requirement of cutting tissue. Introducing topology modifications, such as cutting, into these precomputed schemes does however come as a challenge, as the precomputed data needs to be modified, to reflect the new topology. In particular, recomputing
K
−1 is too costly to be performed during the simulation. Our topology modification method is based upon updating
K
−1 rather than entirely recomputing the matrix. By integrating condensation, we improve efficiency to allow for interaction with larger models. We can further enhance this by redistributing computational load to improve the system’s real-time response. We exemplify our techniques with results from our surgical simulation system.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>20920518</pmid><doi>10.1016/j.pbiomolbio.2010.09.011</doi><tpages>16</tpages></addata></record> |
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subjects | Biomechanical Phenomena Computer Simulation Condensation Cutting Elasticity Finite Element Analysis Finite element method Haptics Humans Models, Biological Real-time Stress, Mechanical Surgical Procedures, Operative Surgical simulation Topology modification User-Computer Interface |
title | Topology modification for surgical simulation using precomputed finite element models based on linear elasticity |
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