The CD39-like gene family : Identification of three new human members (CD39l2, CD39L3, and CD3914), their murine homologues, and a member of the gene family from drosophila melanogaster
The human lymphoid cell activation antigen CD39 is a known E-type apyrase that hydrolyzes extracellular ATP and ADP, a function important in homotypic adhesion, platelet aggregation, and removal by activated lymphocytes of the lytic effect of ATP. The recently identified putative rat homologue of CD...
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Veröffentlicht in: | Genomics (San Diego, Calif.) Calif.), 1998-06, Vol.50 (3), p.357-367 |
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description | The human lymphoid cell activation antigen CD39 is a known E-type apyrase that hydrolyzes extracellular ATP and ADP, a function important in homotypic adhesion, platelet aggregation, and removal by activated lymphocytes of the lytic effect of ATP. The recently identified putative rat homologue of CD39L1 has been shown to have E-type ecto-ATPase activity, by hydrolyzing extracellular ATP. We have characterized three novel CD39-like transcripts, CD39L2, CD39L3, and CD39L4, which share extensive amino acid homology with other nucleotide triphosphatases in vertebrates, invertebrates, and plants, suggesting that these genes also encode proteins with ecto-nucleotidase activity. Isolation and sequencing of full-length cDNA clones for each gene identified putative proteins of 485, 529, and 429 amino acids. The expression pattern of all five human members of the gene family was analyzed. CD39L2, CD39L3, and CD39L4 were mapped on the human genome, and the murine homologues identified with the putative map locations were assigned on the basis of regions of conserved gene order between human and mouse chromosomes. The map location of mcd39l4 places the gene within a region associated with audiogenic seizure susceptibility in mouse. This disorder is characterized by convulsions induced by loud high-frequency sound and has been shown to be associated with increased nucleotide triphosphatase activity. |
doi_str_mv | 10.1006/geno.1998.5317 |
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P ; FRISCHAUF, A.-M</creator><creatorcontrib>CHADWICK, B. P ; FRISCHAUF, A.-M</creatorcontrib><description>The human lymphoid cell activation antigen CD39 is a known E-type apyrase that hydrolyzes extracellular ATP and ADP, a function important in homotypic adhesion, platelet aggregation, and removal by activated lymphocytes of the lytic effect of ATP. The recently identified putative rat homologue of CD39L1 has been shown to have E-type ecto-ATPase activity, by hydrolyzing extracellular ATP. We have characterized three novel CD39-like transcripts, CD39L2, CD39L3, and CD39L4, which share extensive amino acid homology with other nucleotide triphosphatases in vertebrates, invertebrates, and plants, suggesting that these genes also encode proteins with ecto-nucleotidase activity. Isolation and sequencing of full-length cDNA clones for each gene identified putative proteins of 485, 529, and 429 amino acids. The expression pattern of all five human members of the gene family was analyzed. CD39L2, CD39L3, and CD39L4 were mapped on the human genome, and the murine homologues identified with the putative map locations were assigned on the basis of regions of conserved gene order between human and mouse chromosomes. The map location of mcd39l4 places the gene within a region associated with audiogenic seizure susceptibility in mouse. This disorder is characterized by convulsions induced by loud high-frequency sound and has been shown to be associated with increased nucleotide triphosphatase activity.</description><identifier>ISSN: 0888-7543</identifier><identifier>EISSN: 1089-8646</identifier><identifier>DOI: 10.1006/geno.1998.5317</identifier><identifier>PMID: 9676430</identifier><language>eng</language><publisher>San Diego, CA: Elsevier</publisher><subject>Adenosine Triphosphatases - chemistry ; Adenosine Triphosphatases - genetics ; Amino Acid Sequence ; Animals ; Antigens, CD - chemistry ; Antigens, CD - genetics ; Apyrase - genetics ; Biological and medical sciences ; Blotting, Northern ; Chromosome Mapping ; DNA, Complementary ; Drosophila melanogaster - genetics ; Fundamental and applied biological sciences. Psychology ; Gene Expression ; Genes. Genome ; Humans ; Mice ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; Multigene Family - genetics ; Polymerase Chain Reaction ; Sequence Alignment ; Sequence Analysis, DNA ; Sequence Homology, Nucleic Acid</subject><ispartof>Genomics (San Diego, Calif.), 1998-06, Vol.50 (3), p.357-367</ispartof><rights>1998 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=2333673$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9676430$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>CHADWICK, B. P</creatorcontrib><creatorcontrib>FRISCHAUF, A.-M</creatorcontrib><title>The CD39-like gene family : Identification of three new human members (CD39l2, CD39L3, and CD3914), their murine homologues, and a member of the gene family from drosophila melanogaster</title><title>Genomics (San Diego, Calif.)</title><addtitle>Genomics</addtitle><description>The human lymphoid cell activation antigen CD39 is a known E-type apyrase that hydrolyzes extracellular ATP and ADP, a function important in homotypic adhesion, platelet aggregation, and removal by activated lymphocytes of the lytic effect of ATP. The recently identified putative rat homologue of CD39L1 has been shown to have E-type ecto-ATPase activity, by hydrolyzing extracellular ATP. We have characterized three novel CD39-like transcripts, CD39L2, CD39L3, and CD39L4, which share extensive amino acid homology with other nucleotide triphosphatases in vertebrates, invertebrates, and plants, suggesting that these genes also encode proteins with ecto-nucleotidase activity. Isolation and sequencing of full-length cDNA clones for each gene identified putative proteins of 485, 529, and 429 amino acids. The expression pattern of all five human members of the gene family was analyzed. CD39L2, CD39L3, and CD39L4 were mapped on the human genome, and the murine homologues identified with the putative map locations were assigned on the basis of regions of conserved gene order between human and mouse chromosomes. The map location of mcd39l4 places the gene within a region associated with audiogenic seizure susceptibility in mouse. This disorder is characterized by convulsions induced by loud high-frequency sound and has been shown to be associated with increased nucleotide triphosphatase activity.</description><subject>Adenosine Triphosphatases - chemistry</subject><subject>Adenosine Triphosphatases - genetics</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Antigens, CD - chemistry</subject><subject>Antigens, CD - genetics</subject><subject>Apyrase - genetics</subject><subject>Biological and medical sciences</subject><subject>Blotting, Northern</subject><subject>Chromosome Mapping</subject><subject>DNA, Complementary</subject><subject>Drosophila melanogaster - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Expression</subject><subject>Genes. Genome</subject><subject>Humans</subject><subject>Mice</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>Multigene Family - genetics</subject><subject>Polymerase Chain Reaction</subject><subject>Sequence Alignment</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology, Nucleic Acid</subject><issn>0888-7543</issn><issn>1089-8646</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU2LFDEQhoMo67h69SbkIKIwPSZd3fnwJuPXwoCX9TykM5XpaNIZk25kf5r_zp6dRvDkqQrepx5eKEKec7bhjIm3RxzShmutNi1w-YCsOFO6UqIRD8mKKaUq2TbwmDwp5TtjTIOqr8iVFlI0wFbk922PdPsBdBX8D6SzDakz0Yc7-o7eHHAYvfPWjD4NNDk69hmRDviL9lM0A40YO8yFvj4rQr2-V-1gTc1wuN9582Y9X6HPNE7Zz_Y-xRTSccJyocwiuej_reByivSQU0mn3oczGcyQjqaMmJ-SR86Egs-WeU2-ffp4u_1S7b5-vtm-31XHWvOxctw6aRrWcQ5gO66kACUZ1-AMs463QhsA2Snm7JlEK1rRsVoIxUE6Bdfk1cV7yunn3HrcR18shrkJpqnsFWPA61b-F-Sq4ULWYgZfLODURTzsT9lHk-_2y1Pm_OWSm2JNcNkM1pe_WA0AQgL8Ac1kmWA</recordid><startdate>19980615</startdate><enddate>19980615</enddate><creator>CHADWICK, B. P</creator><creator>FRISCHAUF, A.-M</creator><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19980615</creationdate><title>The CD39-like gene family : Identification of three new human members (CD39l2, CD39L3, and CD3914), their murine homologues, and a member of the gene family from drosophila melanogaster</title><author>CHADWICK, B. P ; FRISCHAUF, A.-M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-g291t-f1cf7a40b1133cb18763870193fa0cf1569a337b80fccf7aec656b02668137f83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>Adenosine Triphosphatases - chemistry</topic><topic>Adenosine Triphosphatases - genetics</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Antigens, CD - chemistry</topic><topic>Antigens, CD - genetics</topic><topic>Apyrase - genetics</topic><topic>Biological and medical sciences</topic><topic>Blotting, Northern</topic><topic>Chromosome Mapping</topic><topic>DNA, Complementary</topic><topic>Drosophila melanogaster - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Expression</topic><topic>Genes. Genome</topic><topic>Humans</topic><topic>Mice</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>Multigene Family - genetics</topic><topic>Polymerase Chain Reaction</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Nucleic Acid</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>CHADWICK, B. P</creatorcontrib><creatorcontrib>FRISCHAUF, A.-M</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Genomics (San Diego, Calif.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>CHADWICK, B. P</au><au>FRISCHAUF, A.-M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The CD39-like gene family : Identification of three new human members (CD39l2, CD39L3, and CD3914), their murine homologues, and a member of the gene family from drosophila melanogaster</atitle><jtitle>Genomics (San Diego, Calif.)</jtitle><addtitle>Genomics</addtitle><date>1998-06-15</date><risdate>1998</risdate><volume>50</volume><issue>3</issue><spage>357</spage><epage>367</epage><pages>357-367</pages><issn>0888-7543</issn><eissn>1089-8646</eissn><abstract>The human lymphoid cell activation antigen CD39 is a known E-type apyrase that hydrolyzes extracellular ATP and ADP, a function important in homotypic adhesion, platelet aggregation, and removal by activated lymphocytes of the lytic effect of ATP. The recently identified putative rat homologue of CD39L1 has been shown to have E-type ecto-ATPase activity, by hydrolyzing extracellular ATP. We have characterized three novel CD39-like transcripts, CD39L2, CD39L3, and CD39L4, which share extensive amino acid homology with other nucleotide triphosphatases in vertebrates, invertebrates, and plants, suggesting that these genes also encode proteins with ecto-nucleotidase activity. Isolation and sequencing of full-length cDNA clones for each gene identified putative proteins of 485, 529, and 429 amino acids. The expression pattern of all five human members of the gene family was analyzed. CD39L2, CD39L3, and CD39L4 were mapped on the human genome, and the murine homologues identified with the putative map locations were assigned on the basis of regions of conserved gene order between human and mouse chromosomes. The map location of mcd39l4 places the gene within a region associated with audiogenic seizure susceptibility in mouse. This disorder is characterized by convulsions induced by loud high-frequency sound and has been shown to be associated with increased nucleotide triphosphatase activity.</abstract><cop>San Diego, CA</cop><pub>Elsevier</pub><pmid>9676430</pmid><doi>10.1006/geno.1998.5317</doi><tpages>11</tpages></addata></record> |
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subjects | Adenosine Triphosphatases - chemistry Adenosine Triphosphatases - genetics Amino Acid Sequence Animals Antigens, CD - chemistry Antigens, CD - genetics Apyrase - genetics Biological and medical sciences Blotting, Northern Chromosome Mapping DNA, Complementary Drosophila melanogaster - genetics Fundamental and applied biological sciences. Psychology Gene Expression Genes. Genome Humans Mice Molecular and cellular biology Molecular genetics Molecular Sequence Data Multigene Family - genetics Polymerase Chain Reaction Sequence Alignment Sequence Analysis, DNA Sequence Homology, Nucleic Acid |
title | The CD39-like gene family : Identification of three new human members (CD39l2, CD39L3, and CD3914), their murine homologues, and a member of the gene family from drosophila melanogaster |
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