Molecular epidemiology of Mycobacterium bovis isolates from South America
One hundred seventy-eight isolates of Mycobacterium bovis were subjected to DNA restriction fragment length polymorphism (RFLP) analysis, using the direct repeat element (DR) and the polymorphic GC-rich repeat sequence (PGRS) as probes. By combining the patterns generated by the two repeat DNA eleme...
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| Veröffentlicht in: | Veterinary microbiology 1998-02, Vol.60 (2), p.251-257 |
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| creator | Fisanotti, Juan C Alito, Alicia Bigi, Fabiana Latini, Omar Roxo, Eliana Cicuta, Elena Zumarraga, Martin J Cataldi, Angel Romano, Maria I |
| description | One hundred seventy-eight isolates of
Mycobacterium bovis were subjected to DNA restriction fragment length polymorphism (RFLP) analysis, using the direct repeat element (DR) and the polymorphic GC-rich repeat sequence (PGRS) as probes. By combining the patterns generated by the two repeat DNA elements, 93 different patterns were observed. One hundred-one isolates were grouped in clusters, which include 25 different clusters. One pattern was the most frequently observed, clustering 18.5% of isolates. It was only found in the Center and northeast regions of Argentina and in one isolate from Paraguay. The isolates from Brazil analyzed here presented exclusive patterns (only found in a particular region). The number of exclusive patterns was high in all Argentine regions: northeast 78%, center 81%, and Buenos Aires 81%. |
| doi_str_mv | 10.1016/S0378-1135(98)00150-3 |
| format | Article |
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Mycobacterium bovis were subjected to DNA restriction fragment length polymorphism (RFLP) analysis, using the direct repeat element (DR) and the polymorphic GC-rich repeat sequence (PGRS) as probes. By combining the patterns generated by the two repeat DNA elements, 93 different patterns were observed. One hundred-one isolates were grouped in clusters, which include 25 different clusters. One pattern was the most frequently observed, clustering 18.5% of isolates. It was only found in the Center and northeast regions of Argentina and in one isolate from Paraguay. The isolates from Brazil analyzed here presented exclusive patterns (only found in a particular region). The number of exclusive patterns was high in all Argentine regions: northeast 78%, center 81%, and Buenos Aires 81%.</description><identifier>ISSN: 0378-1135</identifier><identifier>EISSN: 1873-2542</identifier><identifier>DOI: 10.1016/S0378-1135(98)00150-3</identifier><identifier>PMID: 9646455</identifier><identifier>CODEN: VMICDQ</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Animals ; ARGENTINA ; ARGENTINE ; Bacteriology ; Biological and medical sciences ; BOVIN ; BRASIL ; BRAZIL ; BRESIL ; CATTLE ; Cluster Analysis ; Dinucleotide Repeats ; DNA FINGERPRINTING ; DR/PGRS markers ; EMPREINTE ADN ; EPIDEMIOLOGIA ; EPIDEMIOLOGIE ; EPIDEMIOLOGY ; Fundamental and applied biological sciences. Psychology ; GANADO BOVINO ; GENETIC MARKERS ; Geography ; HUELLAS GENETICAS ADN ; MARCADORES GENETICOS ; MARQUEUR GENETIQUE ; Microbiology ; Molecular Epidemiology ; MYCOBACTERIUM BOVIS ; Mycobacterium bovis - genetics ; Mycobacterium bovis - isolation & purification ; PARAGUAY ; Polymorphism, Restriction Fragment Length ; Repetitive Sequences, Nucleic Acid ; RFLP ; South America - epidemiology ; Tuberculosis, Bovine - epidemiology</subject><ispartof>Veterinary microbiology, 1998-02, Vol.60 (2), p.251-257</ispartof><rights>1998 Elsevier Science B.V.</rights><rights>1998 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c411t-9b318ce10fdf4568e9d9d03798aa5f7cea870ab9275b3e9d002ebdb07650cef13</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/S0378-1135(98)00150-3$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,782,786,3554,27933,27934,46004</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=2311892$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9646455$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fisanotti, Juan C</creatorcontrib><creatorcontrib>Alito, Alicia</creatorcontrib><creatorcontrib>Bigi, Fabiana</creatorcontrib><creatorcontrib>Latini, Omar</creatorcontrib><creatorcontrib>Roxo, Eliana</creatorcontrib><creatorcontrib>Cicuta, Elena</creatorcontrib><creatorcontrib>Zumarraga, Martin J</creatorcontrib><creatorcontrib>Cataldi, Angel</creatorcontrib><creatorcontrib>Romano, Maria I</creatorcontrib><title>Molecular epidemiology of Mycobacterium bovis isolates from South America</title><title>Veterinary microbiology</title><addtitle>Vet Microbiol</addtitle><description>One hundred seventy-eight isolates of
Mycobacterium bovis were subjected to DNA restriction fragment length polymorphism (RFLP) analysis, using the direct repeat element (DR) and the polymorphic GC-rich repeat sequence (PGRS) as probes. By combining the patterns generated by the two repeat DNA elements, 93 different patterns were observed. One hundred-one isolates were grouped in clusters, which include 25 different clusters. One pattern was the most frequently observed, clustering 18.5% of isolates. It was only found in the Center and northeast regions of Argentina and in one isolate from Paraguay. The isolates from Brazil analyzed here presented exclusive patterns (only found in a particular region). The number of exclusive patterns was high in all Argentine regions: northeast 78%, center 81%, and Buenos Aires 81%.</description><subject>Animals</subject><subject>ARGENTINA</subject><subject>ARGENTINE</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>BOVIN</subject><subject>BRASIL</subject><subject>BRAZIL</subject><subject>BRESIL</subject><subject>CATTLE</subject><subject>Cluster Analysis</subject><subject>Dinucleotide Repeats</subject><subject>DNA FINGERPRINTING</subject><subject>DR/PGRS markers</subject><subject>EMPREINTE ADN</subject><subject>EPIDEMIOLOGIA</subject><subject>EPIDEMIOLOGIE</subject><subject>EPIDEMIOLOGY</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>GANADO BOVINO</subject><subject>GENETIC MARKERS</subject><subject>Geography</subject><subject>HUELLAS GENETICAS ADN</subject><subject>MARCADORES GENETICOS</subject><subject>MARQUEUR GENETIQUE</subject><subject>Microbiology</subject><subject>Molecular Epidemiology</subject><subject>MYCOBACTERIUM BOVIS</subject><subject>Mycobacterium bovis - genetics</subject><subject>Mycobacterium bovis - isolation & purification</subject><subject>PARAGUAY</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Repetitive Sequences, Nucleic Acid</subject><subject>RFLP</subject><subject>South America - epidemiology</subject><subject>Tuberculosis, Bovine - epidemiology</subject><issn>0378-1135</issn><issn>1873-2542</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE1P3DAQhq0KRLe0PwEphwqVQ2AmjhP7hBAqLdIuPQBny3HG1FWyXuwEaf892Q9tj5zm8D7zzuhh7AzhEgGrq0fgtcwRufih5AUACsj5JzZDWfO8EGVxxGYH5DP7ktI_AChVBSfsRFVlVQoxY_eL0JEdOxMzWvmWeh-68LLOgssWaxsaYweKfuyzJrz5lPkUOjNQylwMffYYxuFvdtNPhDVf2bEzXaJv-3nKnu9-Pt3-zud_ft3f3sxzWyIOuWo4SksIrnWlqCSpVrXTn0oaI1xtycgaTKOKWjR8CgEKatoG6kqAJYf8lJ3velcxvI6UBt37ZKnrzJLCmHStVF1WCBModqCNIaVITq-i701cawS9Uai3CvXGj1ZSbxVqPu2d7Q-MTU_tYWvvbMq_73OTrOlcNEvr0wErOKJUxf8aZ4I2L3FCHuaolATgQm5qrnc5TbLePEWdrKelpdZHsoNug__g0Xd_vZaN</recordid><startdate>19980228</startdate><enddate>19980228</enddate><creator>Fisanotti, Juan C</creator><creator>Alito, Alicia</creator><creator>Bigi, Fabiana</creator><creator>Latini, Omar</creator><creator>Roxo, Eliana</creator><creator>Cicuta, Elena</creator><creator>Zumarraga, Martin J</creator><creator>Cataldi, Angel</creator><creator>Romano, Maria I</creator><general>Elsevier B.V</general><general>Elsevier Science</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19980228</creationdate><title>Molecular epidemiology of Mycobacterium bovis isolates from South America</title><author>Fisanotti, Juan C ; Alito, Alicia ; Bigi, Fabiana ; Latini, Omar ; Roxo, Eliana ; Cicuta, Elena ; Zumarraga, Martin J ; Cataldi, Angel ; Romano, Maria I</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c411t-9b318ce10fdf4568e9d9d03798aa5f7cea870ab9275b3e9d002ebdb07650cef13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>Animals</topic><topic>ARGENTINA</topic><topic>ARGENTINE</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>BOVIN</topic><topic>BRASIL</topic><topic>BRAZIL</topic><topic>BRESIL</topic><topic>CATTLE</topic><topic>Cluster Analysis</topic><topic>Dinucleotide Repeats</topic><topic>DNA FINGERPRINTING</topic><topic>DR/PGRS markers</topic><topic>EMPREINTE ADN</topic><topic>EPIDEMIOLOGIA</topic><topic>EPIDEMIOLOGIE</topic><topic>EPIDEMIOLOGY</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>GANADO BOVINO</topic><topic>GENETIC MARKERS</topic><topic>Geography</topic><topic>HUELLAS GENETICAS ADN</topic><topic>MARCADORES GENETICOS</topic><topic>MARQUEUR GENETIQUE</topic><topic>Microbiology</topic><topic>Molecular Epidemiology</topic><topic>MYCOBACTERIUM BOVIS</topic><topic>Mycobacterium bovis - genetics</topic><topic>Mycobacterium bovis - isolation & purification</topic><topic>PARAGUAY</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Repetitive Sequences, Nucleic Acid</topic><topic>RFLP</topic><topic>South America - epidemiology</topic><topic>Tuberculosis, Bovine - epidemiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fisanotti, Juan C</creatorcontrib><creatorcontrib>Alito, Alicia</creatorcontrib><creatorcontrib>Bigi, Fabiana</creatorcontrib><creatorcontrib>Latini, Omar</creatorcontrib><creatorcontrib>Roxo, Eliana</creatorcontrib><creatorcontrib>Cicuta, Elena</creatorcontrib><creatorcontrib>Zumarraga, Martin J</creatorcontrib><creatorcontrib>Cataldi, Angel</creatorcontrib><creatorcontrib>Romano, Maria I</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Veterinary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fisanotti, Juan C</au><au>Alito, Alicia</au><au>Bigi, Fabiana</au><au>Latini, Omar</au><au>Roxo, Eliana</au><au>Cicuta, Elena</au><au>Zumarraga, Martin J</au><au>Cataldi, Angel</au><au>Romano, Maria I</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular epidemiology of Mycobacterium bovis isolates from South America</atitle><jtitle>Veterinary microbiology</jtitle><addtitle>Vet Microbiol</addtitle><date>1998-02-28</date><risdate>1998</risdate><volume>60</volume><issue>2</issue><spage>251</spage><epage>257</epage><pages>251-257</pages><issn>0378-1135</issn><eissn>1873-2542</eissn><coden>VMICDQ</coden><abstract>One hundred seventy-eight isolates of
Mycobacterium bovis were subjected to DNA restriction fragment length polymorphism (RFLP) analysis, using the direct repeat element (DR) and the polymorphic GC-rich repeat sequence (PGRS) as probes. By combining the patterns generated by the two repeat DNA elements, 93 different patterns were observed. One hundred-one isolates were grouped in clusters, which include 25 different clusters. One pattern was the most frequently observed, clustering 18.5% of isolates. It was only found in the Center and northeast regions of Argentina and in one isolate from Paraguay. The isolates from Brazil analyzed here presented exclusive patterns (only found in a particular region). The number of exclusive patterns was high in all Argentine regions: northeast 78%, center 81%, and Buenos Aires 81%.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>9646455</pmid><doi>10.1016/S0378-1135(98)00150-3</doi><tpages>7</tpages></addata></record> |
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| subjects | Animals ARGENTINA ARGENTINE Bacteriology Biological and medical sciences BOVIN BRASIL BRAZIL BRESIL CATTLE Cluster Analysis Dinucleotide Repeats DNA FINGERPRINTING DR/PGRS markers EMPREINTE ADN EPIDEMIOLOGIA EPIDEMIOLOGIE EPIDEMIOLOGY Fundamental and applied biological sciences. Psychology GANADO BOVINO GENETIC MARKERS Geography HUELLAS GENETICAS ADN MARCADORES GENETICOS MARQUEUR GENETIQUE Microbiology Molecular Epidemiology MYCOBACTERIUM BOVIS Mycobacterium bovis - genetics Mycobacterium bovis - isolation & purification PARAGUAY Polymorphism, Restriction Fragment Length Repetitive Sequences, Nucleic Acid RFLP South America - epidemiology Tuberculosis, Bovine - epidemiology |
| title | Molecular epidemiology of Mycobacterium bovis isolates from South America |
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