Evidence for false aneuploid peaks in flow cytometric analysis of paraffin‐embedded tissue
It has recently been shown that bimodal histograms with false aneuploid peaks may be obtained by DNA flow cytometry from histologically normal tissue allowed to autolyze. To investigate if such peaks can be generated from surgically excised archival tissue, 198 paraffin blocks from 179 patients cont...
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Veröffentlicht in: | Cytometry (New York, N.Y.) N.Y.), 1990, Vol.11 (3), p.431-437 |
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description | It has recently been shown that bimodal histograms with false aneuploid peaks may be obtained by DNA flow cytometry from histologically normal tissue allowed to autolyze. To investigate if such peaks can be generated from surgically excised archival tissue, 198 paraffin blocks from 179 patients containing histologically normal spleen (n = 65), liver (n = 26), thyroid (n = 32), pancreas (n = 19), salivary gland (n = 49), or lymph node tissue (n = 7), obtained from the archives of two university pathology departments, were analyzed for nuclear DNA content. The great majority (n = 160, 83.8%) of the 191 interpretable histograms had a single symmetrical G1 peak; and 8 histograms, all produced from liver tissue had a tetraploid pattern. A slight or a prominent repeatable deviation in the G1 peak outline was present in 14 (7.3%) cases. A peak resembling an aneuploid G1 peak with a DNA index (DI) ranging from 1.14 to 1.38 was repeatedly produced from 9 (4.7%) blocks containing histologically normal or inflamed splenic (n = 3), pancreatc (n = 3), liver (n = 1), thyroid (n = 1), or lymph node (n = 1) tissue. The three abnormal peaks produced from pancreatic tissue were rounded in shape and resembled closely the ones that can be obtained from autolytic pancreatic tissue, and the six remaining extra peaks were all fused with the “diploid” peak. In conclusion, false peaks, probably caused by degradation of the nuclear contents during formalin fixation or before it, may rarely be obtained from surgical paraffin‐embedded samples. |
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To investigate if such peaks can be generated from surgically excised archival tissue, 198 paraffin blocks from 179 patients containing histologically normal spleen (n = 65), liver (n = 26), thyroid (n = 32), pancreas (n = 19), salivary gland (n = 49), or lymph node tissue (n = 7), obtained from the archives of two university pathology departments, were analyzed for nuclear DNA content. The great majority (n = 160, 83.8%) of the 191 interpretable histograms had a single symmetrical G1 peak; and 8 histograms, all produced from liver tissue had a tetraploid pattern. A slight or a prominent repeatable deviation in the G1 peak outline was present in 14 (7.3%) cases. A peak resembling an aneuploid G1 peak with a DNA index (DI) ranging from 1.14 to 1.38 was repeatedly produced from 9 (4.7%) blocks containing histologically normal or inflamed splenic (n = 3), pancreatc (n = 3), liver (n = 1), thyroid (n = 1), or lymph node (n = 1) tissue. The three abnormal peaks produced from pancreatic tissue were rounded in shape and resembled closely the ones that can be obtained from autolytic pancreatic tissue, and the six remaining extra peaks were all fused with the “diploid” peak. In conclusion, false peaks, probably caused by degradation of the nuclear contents during formalin fixation or before it, may rarely be obtained from surgical paraffin‐embedded samples.</description><identifier>ISSN: 0196-4763</identifier><identifier>EISSN: 1097-0320</identifier><identifier>DOI: 10.1002/cyto.990110314</identifier><identifier>PMID: 2340777</identifier><identifier>CODEN: CYTODQ</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>Aneuploidy ; Autolysis ; Biological and medical sciences ; Cytogenetics ; DNA - analysis ; DNA content ; False Negative Reactions ; fixation artifacts ; Flow Cytometry - methods ; Fundamental and applied biological sciences. Psychology ; Genetics of eukaryotes. Biological and molecular evolution ; Humans ; Methods and miscellaneous ; normal tissue ; Paraffin ; Spleen - analysis ; Spleen - cytology ; Thyroid Gland - analysis ; Thyroid Gland - cytology</subject><ispartof>Cytometry (New York, N.Y.), 1990, Vol.11 (3), p.431-437</ispartof><rights>Copyright © 1990 Wiley‐Liss, Inc.</rights><rights>1991 INIST-CNRS</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3704-c2eb81c987362188e83228cf62345700453ddf009d1080f66c8e6f358e7ada0e3</citedby><cites>FETCH-LOGICAL-c3704-c2eb81c987362188e83228cf62345700453ddf009d1080f66c8e6f358e7ada0e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,4024,27923,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=19652917$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/2340777$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Joensuu, Heikki</creatorcontrib><creatorcontrib>Alanen, Kalle A.</creatorcontrib><creatorcontrib>Klemi, Pekka J.</creatorcontrib><creatorcontrib>Aine, Risto</creatorcontrib><title>Evidence for false aneuploid peaks in flow cytometric analysis of paraffin‐embedded tissue</title><title>Cytometry (New York, N.Y.)</title><addtitle>Cytometry</addtitle><description>It has recently been shown that bimodal histograms with false aneuploid peaks may be obtained by DNA flow cytometry from histologically normal tissue allowed to autolyze. To investigate if such peaks can be generated from surgically excised archival tissue, 198 paraffin blocks from 179 patients containing histologically normal spleen (n = 65), liver (n = 26), thyroid (n = 32), pancreas (n = 19), salivary gland (n = 49), or lymph node tissue (n = 7), obtained from the archives of two university pathology departments, were analyzed for nuclear DNA content. The great majority (n = 160, 83.8%) of the 191 interpretable histograms had a single symmetrical G1 peak; and 8 histograms, all produced from liver tissue had a tetraploid pattern. A slight or a prominent repeatable deviation in the G1 peak outline was present in 14 (7.3%) cases. A peak resembling an aneuploid G1 peak with a DNA index (DI) ranging from 1.14 to 1.38 was repeatedly produced from 9 (4.7%) blocks containing histologically normal or inflamed splenic (n = 3), pancreatc (n = 3), liver (n = 1), thyroid (n = 1), or lymph node (n = 1) tissue. The three abnormal peaks produced from pancreatic tissue were rounded in shape and resembled closely the ones that can be obtained from autolytic pancreatic tissue, and the six remaining extra peaks were all fused with the “diploid” peak. In conclusion, false peaks, probably caused by degradation of the nuclear contents during formalin fixation or before it, may rarely be obtained from surgical paraffin‐embedded samples.</description><subject>Aneuploidy</subject><subject>Autolysis</subject><subject>Biological and medical sciences</subject><subject>Cytogenetics</subject><subject>DNA - analysis</subject><subject>DNA content</subject><subject>False Negative Reactions</subject><subject>fixation artifacts</subject><subject>Flow Cytometry - methods</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetics of eukaryotes. Biological and molecular evolution</subject><subject>Humans</subject><subject>Methods and miscellaneous</subject><subject>normal tissue</subject><subject>Paraffin</subject><subject>Spleen - analysis</subject><subject>Spleen - cytology</subject><subject>Thyroid Gland - analysis</subject><subject>Thyroid Gland - cytology</subject><issn>0196-4763</issn><issn>1097-0320</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1990</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkDtPHDEUhS0Egg2hTYfkBrpZru0ZP0q04hEJiYYUkSKNvPa15DAv7B1W2-Un5DfyS5jNrqBMdYv73XPPOYR8YzBnAPzKbVb93BhgDAQrD8iMgVEFCA6HZAbMyKJUUpyQLzn_BgAjS3FMjrkoQSk1I79uXqPHziENfaLBNhmp7XAcmj56OqB9zjR2NDT9mm5ftbhK0U2IbTY5ZtoHOthkQ4jd25-_2C7Re_R0FXMe8Ss5-qd4tp-n5MftzdPivnh4vPu-uH4onFBQFo7jUjNntBKSM61RC861C3JyWSmAshLeh8m7Z6AhSOk0yiAqjcp6CyhOyeVOd0j9y4h5VbcxO2yaKUk_5loZpXTFqwmc70CX-pwThnpIsbVpUzOot3XW24z1R53TwfleeVy26D_wfX_T_mK_t9nZJiTbuZg_VY2suGFbzuy4dWxw85-v9eLn0-Onh3f-F4_8</recordid><startdate>1990</startdate><enddate>1990</enddate><creator>Joensuu, Heikki</creator><creator>Alanen, Kalle A.</creator><creator>Klemi, Pekka J.</creator><creator>Aine, Risto</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><general>Wiley-Liss</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>1990</creationdate><title>Evidence for false aneuploid peaks in flow cytometric analysis of paraffin‐embedded tissue</title><author>Joensuu, Heikki ; Alanen, Kalle A. ; Klemi, Pekka J. ; Aine, Risto</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3704-c2eb81c987362188e83228cf62345700453ddf009d1080f66c8e6f358e7ada0e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1990</creationdate><topic>Aneuploidy</topic><topic>Autolysis</topic><topic>Biological and medical sciences</topic><topic>Cytogenetics</topic><topic>DNA - analysis</topic><topic>DNA content</topic><topic>False Negative Reactions</topic><topic>fixation artifacts</topic><topic>Flow Cytometry - methods</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetics of eukaryotes. Biological and molecular evolution</topic><topic>Humans</topic><topic>Methods and miscellaneous</topic><topic>normal tissue</topic><topic>Paraffin</topic><topic>Spleen - analysis</topic><topic>Spleen - cytology</topic><topic>Thyroid Gland - analysis</topic><topic>Thyroid Gland - cytology</topic><toplevel>online_resources</toplevel><creatorcontrib>Joensuu, Heikki</creatorcontrib><creatorcontrib>Alanen, Kalle A.</creatorcontrib><creatorcontrib>Klemi, Pekka J.</creatorcontrib><creatorcontrib>Aine, Risto</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Cytometry (New York, N.Y.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Joensuu, Heikki</au><au>Alanen, Kalle A.</au><au>Klemi, Pekka J.</au><au>Aine, Risto</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evidence for false aneuploid peaks in flow cytometric analysis of paraffin‐embedded tissue</atitle><jtitle>Cytometry (New York, N.Y.)</jtitle><addtitle>Cytometry</addtitle><date>1990</date><risdate>1990</risdate><volume>11</volume><issue>3</issue><spage>431</spage><epage>437</epage><pages>431-437</pages><issn>0196-4763</issn><eissn>1097-0320</eissn><coden>CYTODQ</coden><abstract>It has recently been shown that bimodal histograms with false aneuploid peaks may be obtained by DNA flow cytometry from histologically normal tissue allowed to autolyze. To investigate if such peaks can be generated from surgically excised archival tissue, 198 paraffin blocks from 179 patients containing histologically normal spleen (n = 65), liver (n = 26), thyroid (n = 32), pancreas (n = 19), salivary gland (n = 49), or lymph node tissue (n = 7), obtained from the archives of two university pathology departments, were analyzed for nuclear DNA content. The great majority (n = 160, 83.8%) of the 191 interpretable histograms had a single symmetrical G1 peak; and 8 histograms, all produced from liver tissue had a tetraploid pattern. A slight or a prominent repeatable deviation in the G1 peak outline was present in 14 (7.3%) cases. A peak resembling an aneuploid G1 peak with a DNA index (DI) ranging from 1.14 to 1.38 was repeatedly produced from 9 (4.7%) blocks containing histologically normal or inflamed splenic (n = 3), pancreatc (n = 3), liver (n = 1), thyroid (n = 1), or lymph node (n = 1) tissue. The three abnormal peaks produced from pancreatic tissue were rounded in shape and resembled closely the ones that can be obtained from autolytic pancreatic tissue, and the six remaining extra peaks were all fused with the “diploid” peak. In conclusion, false peaks, probably caused by degradation of the nuclear contents during formalin fixation or before it, may rarely be obtained from surgical paraffin‐embedded samples.</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>2340777</pmid><doi>10.1002/cyto.990110314</doi><tpages>7</tpages></addata></record> |
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subjects | Aneuploidy Autolysis Biological and medical sciences Cytogenetics DNA - analysis DNA content False Negative Reactions fixation artifacts Flow Cytometry - methods Fundamental and applied biological sciences. Psychology Genetics of eukaryotes. Biological and molecular evolution Humans Methods and miscellaneous normal tissue Paraffin Spleen - analysis Spleen - cytology Thyroid Gland - analysis Thyroid Gland - cytology |
title | Evidence for false aneuploid peaks in flow cytometric analysis of paraffin‐embedded tissue |
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