Determinants of OmpF porin antigenicity and structure
Sixty-six murine hybridomas raised to Escherichia coli B/r porin were used to identify and differentiate the epitopes of this outer membrane protein. Anti-porin monoclonal antibodies (mAb) were raised against outer membrane fragments, purified native trimeric porin (trimer), and purified sodium dode...
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creator | KLEBBA, P. E BENSON, S. A BALA, S ABDULLAH, T REID, J SINGH, S. P NIKAIDO, H |
description | Sixty-six murine hybridomas raised to Escherichia coli B/r porin were used to identify and differentiate the epitopes of this
outer membrane protein. Anti-porin monoclonal antibodies (mAb) were raised against outer membrane fragments, purified native
trimeric porin (trimer), and purified sodium dodecyl sulfate-denatured monomeric porin (monomer). Immunochemical and flow
cytometric methods identified five distinct cell surface-exposed determinants on OmpF. The peptide composition of porin epitopes
was determined by analysis of mAb reactivity with cyanogen bromide-generated peptide fragments. Four of 43 anti-monomer mAb
reacted with surface exposed sites on OmpF, defining epitopes that consist of residues within CNBr peptides d2, d3, and B.
The anti-porin mAb panel was also used to evaluate changes in porin antigenic structure in strains with short ompF deletions.
Flow cytometric experiments indicated that despite changes in porin permeability, little if any alteration of surface epitopes
occurred in these strains. Western immunoblot analysis of the mutant porins showed loss of reactivity with numerous mAb, which
was caused by changes in three spatially distinct epitopes at residues 108-111, 118-123, and 124-129. Our findings indicate
that in these ompF mutants the residues responsible for altering porin permeability are not exposed on the cell surface, but
are buried within the tertiary structure of the protein. One of these regions, which is apparently involved in the determination
of channel permeability characteristics, is conserved among 15 of 16 different porin molecules which were screened with the
anti-OmpF mAb panel. |
doi_str_mv | 10.1016/s0021-9258(19)39220-8 |
format | Article |
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outer membrane protein. Anti-porin monoclonal antibodies (mAb) were raised against outer membrane fragments, purified native
trimeric porin (trimer), and purified sodium dodecyl sulfate-denatured monomeric porin (monomer). Immunochemical and flow
cytometric methods identified five distinct cell surface-exposed determinants on OmpF. The peptide composition of porin epitopes
was determined by analysis of mAb reactivity with cyanogen bromide-generated peptide fragments. Four of 43 anti-monomer mAb
reacted with surface exposed sites on OmpF, defining epitopes that consist of residues within CNBr peptides d2, d3, and B.
The anti-porin mAb panel was also used to evaluate changes in porin antigenic structure in strains with short ompF deletions.
Flow cytometric experiments indicated that despite changes in porin permeability, little if any alteration of surface epitopes
occurred in these strains. Western immunoblot analysis of the mutant porins showed loss of reactivity with numerous mAb, which
was caused by changes in three spatially distinct epitopes at residues 108-111, 118-123, and 124-129. Our findings indicate
that in these ompF mutants the residues responsible for altering porin permeability are not exposed on the cell surface, but
are buried within the tertiary structure of the protein. One of these regions, which is apparently involved in the determination
of channel permeability characteristics, is conserved among 15 of 16 different porin molecules which were screened with the
anti-OmpF mAb panel.</description><identifier>ISSN: 0021-9258</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1016/s0021-9258(19)39220-8</identifier><identifier>PMID: 1691177</identifier><identifier>CODEN: JBCHA3</identifier><language>eng</language><publisher>Bethesda, MD: American Society for Biochemistry and Molecular Biology</publisher><subject>Amino Acid Sequence ; Antibodies, Monoclonal ; Antibody Specificity ; Antigenic determinants, haptens, artificial antigens ; Antigens ; Antigens, Bacterial ; Bacterial Outer Membrane Proteins - immunology ; Biological and medical sciences ; Cyanogen Bromide ; Enterobacteriaceae - analysis ; Enzyme-Linked Immunosorbent Assay ; Epitopes - analysis ; Escherichia coli ; Escherichia coli - analysis ; Flow Cytometry ; Fundamental and applied biological sciences. Psychology ; Fundamental immunology ; Immunoblotting ; Immunoglobulin Heavy Chains ; Models, Structural ; Molecular immunology ; Molecular Sequence Data ; Peptide Fragments - isolation & purification ; Porins ; Protein Conformation ; Radioimmunoassay ; Species Specificity</subject><ispartof>The Journal of biological chemistry, 1990-04, Vol.265 (12), p.6800-6810</ispartof><rights>1990 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c505t-f8349d99a47591386ab800930e5296de30b00aabfda36cb60a74fe2d03303c433</citedby><cites>FETCH-LOGICAL-c505t-f8349d99a47591386ab800930e5296de30b00aabfda36cb60a74fe2d03303c433</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=6869984$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/1691177$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>KLEBBA, P. E</creatorcontrib><creatorcontrib>BENSON, S. A</creatorcontrib><creatorcontrib>BALA, S</creatorcontrib><creatorcontrib>ABDULLAH, T</creatorcontrib><creatorcontrib>REID, J</creatorcontrib><creatorcontrib>SINGH, S. P</creatorcontrib><creatorcontrib>NIKAIDO, H</creatorcontrib><title>Determinants of OmpF porin antigenicity and structure</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>Sixty-six murine hybridomas raised to Escherichia coli B/r porin were used to identify and differentiate the epitopes of this
outer membrane protein. Anti-porin monoclonal antibodies (mAb) were raised against outer membrane fragments, purified native
trimeric porin (trimer), and purified sodium dodecyl sulfate-denatured monomeric porin (monomer). Immunochemical and flow
cytometric methods identified five distinct cell surface-exposed determinants on OmpF. The peptide composition of porin epitopes
was determined by analysis of mAb reactivity with cyanogen bromide-generated peptide fragments. Four of 43 anti-monomer mAb
reacted with surface exposed sites on OmpF, defining epitopes that consist of residues within CNBr peptides d2, d3, and B.
The anti-porin mAb panel was also used to evaluate changes in porin antigenic structure in strains with short ompF deletions.
Flow cytometric experiments indicated that despite changes in porin permeability, little if any alteration of surface epitopes
occurred in these strains. Western immunoblot analysis of the mutant porins showed loss of reactivity with numerous mAb, which
was caused by changes in three spatially distinct epitopes at residues 108-111, 118-123, and 124-129. Our findings indicate
that in these ompF mutants the residues responsible for altering porin permeability are not exposed on the cell surface, but
are buried within the tertiary structure of the protein. One of these regions, which is apparently involved in the determination
of channel permeability characteristics, is conserved among 15 of 16 different porin molecules which were screened with the
anti-OmpF mAb panel.</description><subject>Amino Acid Sequence</subject><subject>Antibodies, Monoclonal</subject><subject>Antibody Specificity</subject><subject>Antigenic determinants, haptens, artificial antigens</subject><subject>Antigens</subject><subject>Antigens, Bacterial</subject><subject>Bacterial Outer Membrane Proteins - immunology</subject><subject>Biological and medical sciences</subject><subject>Cyanogen Bromide</subject><subject>Enterobacteriaceae - analysis</subject><subject>Enzyme-Linked Immunosorbent Assay</subject><subject>Epitopes - analysis</subject><subject>Escherichia coli</subject><subject>Escherichia coli - analysis</subject><subject>Flow Cytometry</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Fundamental immunology</subject><subject>Immunoblotting</subject><subject>Immunoglobulin Heavy Chains</subject><subject>Models, Structural</subject><subject>Molecular immunology</subject><subject>Molecular Sequence Data</subject><subject>Peptide Fragments - isolation & purification</subject><subject>Porins</subject><subject>Protein Conformation</subject><subject>Radioimmunoassay</subject><subject>Species Specificity</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1990</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkEtLxDAQgIMouj5-wkJBET1UZ5omTY6yPmFhDyp4C2ma7kb6MmkR_71dd9Gjcxlm5psZ-AiZIlwhIL8OAAnGMmHiAuUllUkCsdghEwRBY8rwbZdMfpEDchjCO4yRStwn-8glYpZNCLu1vfW1a3TTh6gto0Xd3Udd610TjS23tI0zrv8aiyIKvR9MP3h7TPZKXQV7ss1H5PX-7mX2GM8XD0-zm3lsGLA-LgVNZSGlTjMmkQqucwEgKViWSF5YCjmA1nlZaMpNzkFnaWmTAigFalJKj8j55m7n24_Bhl7VLhhbVbqx7RBUJjOUwNi_IDI-avi5yDag8W0I3paq867W_kshqLVX9byWptbSFEr141WJcW-6fTDktS3-tjYix_nZdq6D0VXpdWNc-MW44FKKdMRON9jKLVefzluVu9asbK0SzhQmIwhAvwEIMopG</recordid><startdate>19900425</startdate><enddate>19900425</enddate><creator>KLEBBA, P. E</creator><creator>BENSON, S. A</creator><creator>BALA, S</creator><creator>ABDULLAH, T</creator><creator>REID, J</creator><creator>SINGH, S. P</creator><creator>NIKAIDO, H</creator><general>American Society for Biochemistry and Molecular Biology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7Z</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>19900425</creationdate><title>Determinants of OmpF porin antigenicity and structure</title><author>KLEBBA, P. E ; BENSON, S. A ; BALA, S ; ABDULLAH, T ; REID, J ; SINGH, S. P ; NIKAIDO, H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c505t-f8349d99a47591386ab800930e5296de30b00aabfda36cb60a74fe2d03303c433</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1990</creationdate><topic>Amino Acid Sequence</topic><topic>Antibodies, Monoclonal</topic><topic>Antibody Specificity</topic><topic>Antigenic determinants, haptens, artificial antigens</topic><topic>Antigens</topic><topic>Antigens, Bacterial</topic><topic>Bacterial Outer Membrane Proteins - immunology</topic><topic>Biological and medical sciences</topic><topic>Cyanogen Bromide</topic><topic>Enterobacteriaceae - analysis</topic><topic>Enzyme-Linked Immunosorbent Assay</topic><topic>Epitopes - analysis</topic><topic>Escherichia coli</topic><topic>Escherichia coli - analysis</topic><topic>Flow Cytometry</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Fundamental immunology</topic><topic>Immunoblotting</topic><topic>Immunoglobulin Heavy Chains</topic><topic>Models, Structural</topic><topic>Molecular immunology</topic><topic>Molecular Sequence Data</topic><topic>Peptide Fragments - isolation & purification</topic><topic>Porins</topic><topic>Protein Conformation</topic><topic>Radioimmunoassay</topic><topic>Species Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>KLEBBA, P. E</creatorcontrib><creatorcontrib>BENSON, S. A</creatorcontrib><creatorcontrib>BALA, S</creatorcontrib><creatorcontrib>ABDULLAH, T</creatorcontrib><creatorcontrib>REID, J</creatorcontrib><creatorcontrib>SINGH, S. P</creatorcontrib><creatorcontrib>NIKAIDO, H</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biochemistry Abstracts 1</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>KLEBBA, P. E</au><au>BENSON, S. A</au><au>BALA, S</au><au>ABDULLAH, T</au><au>REID, J</au><au>SINGH, S. P</au><au>NIKAIDO, H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Determinants of OmpF porin antigenicity and structure</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>1990-04-25</date><risdate>1990</risdate><volume>265</volume><issue>12</issue><spage>6800</spage><epage>6810</epage><pages>6800-6810</pages><issn>0021-9258</issn><eissn>1083-351X</eissn><coden>JBCHA3</coden><abstract>Sixty-six murine hybridomas raised to Escherichia coli B/r porin were used to identify and differentiate the epitopes of this
outer membrane protein. Anti-porin monoclonal antibodies (mAb) were raised against outer membrane fragments, purified native
trimeric porin (trimer), and purified sodium dodecyl sulfate-denatured monomeric porin (monomer). Immunochemical and flow
cytometric methods identified five distinct cell surface-exposed determinants on OmpF. The peptide composition of porin epitopes
was determined by analysis of mAb reactivity with cyanogen bromide-generated peptide fragments. Four of 43 anti-monomer mAb
reacted with surface exposed sites on OmpF, defining epitopes that consist of residues within CNBr peptides d2, d3, and B.
The anti-porin mAb panel was also used to evaluate changes in porin antigenic structure in strains with short ompF deletions.
Flow cytometric experiments indicated that despite changes in porin permeability, little if any alteration of surface epitopes
occurred in these strains. Western immunoblot analysis of the mutant porins showed loss of reactivity with numerous mAb, which
was caused by changes in three spatially distinct epitopes at residues 108-111, 118-123, and 124-129. Our findings indicate
that in these ompF mutants the residues responsible for altering porin permeability are not exposed on the cell surface, but
are buried within the tertiary structure of the protein. One of these regions, which is apparently involved in the determination
of channel permeability characteristics, is conserved among 15 of 16 different porin molecules which were screened with the
anti-OmpF mAb panel.</abstract><cop>Bethesda, MD</cop><pub>American Society for Biochemistry and Molecular Biology</pub><pmid>1691177</pmid><doi>10.1016/s0021-9258(19)39220-8</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
subjects | Amino Acid Sequence Antibodies, Monoclonal Antibody Specificity Antigenic determinants, haptens, artificial antigens Antigens Antigens, Bacterial Bacterial Outer Membrane Proteins - immunology Biological and medical sciences Cyanogen Bromide Enterobacteriaceae - analysis Enzyme-Linked Immunosorbent Assay Epitopes - analysis Escherichia coli Escherichia coli - analysis Flow Cytometry Fundamental and applied biological sciences. Psychology Fundamental immunology Immunoblotting Immunoglobulin Heavy Chains Models, Structural Molecular immunology Molecular Sequence Data Peptide Fragments - isolation & purification Porins Protein Conformation Radioimmunoassay Species Specificity |
title | Determinants of OmpF porin antigenicity and structure |
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