Organization and nucleotide sequence of a gene cluster coding for eight ribosomal proteins in the archaebacterium Halobacterium marismortui
A DNA fragment containing the genes for the eight ribosomal proteins HmaL3, HL6, HmaL23, HmaL2, HmaS19, HmaL22, HmaS3, and HmaL29 from Halobacterium marismortui has been cloned and sequenced. The organization of this gene cluster in general corresponds to the S10 operon of Escherichia coli although...
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| Veröffentlicht in: | The Journal of biological chemistry 1990-02, Vol.265 (6), p.3034-3039 |
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| creator | Arndt, E Krömer, W Hatakeyama, T |
| description | A DNA fragment containing the genes for the eight ribosomal proteins HmaL3, HL6, HmaL23, HmaL2, HmaS19, HmaL22, HmaS3, and HmaL29 from Halobacterium marismortui has been cloned and sequenced. The organization of this gene cluster in general corresponds to the S10 operon of Escherichia coli although there exists some differences between them. The sequence analysis of the 5'- and 3'-region of the gene cluster revealed three open reading frames (orf1, orf2, and orf3) which do not code for any ribosomal protein whose structure is known. A putative promoter is located upstream of orf1. Out of the eight ribosomal proteins five have counterparts in eubacteria only, two in both eubacteria and eukaryotes, and one is exclusively related to an eukaryotic ribosomal protein. |
| doi_str_mv | 10.1016/S0021-9258(19)39729-7 |
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The organization of this gene cluster in general corresponds to the S10 operon of Escherichia coli although there exists some differences between them. The sequence analysis of the 5'- and 3'-region of the gene cluster revealed three open reading frames (orf1, orf2, and orf3) which do not code for any ribosomal protein whose structure is known. A putative promoter is located upstream of orf1. 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Genome ; Halobacterium - genetics ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; Multigene Family ; Nucleic Acid Hybridization ; Oligonucleotide Probes - chemical synthesis ; Promoter Regions, Genetic ; Restriction Mapping ; ribosomal proteins ; Ribosomal Proteins - genetics ; Sequence Homology, Nucleic Acid ; Software</subject><ispartof>The Journal of biological chemistry, 1990-02, Vol.265 (6), p.3034-3039</ispartof><rights>1990 © 1990 ASBMB. 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The organization of this gene cluster in general corresponds to the S10 operon of Escherichia coli although there exists some differences between them. The sequence analysis of the 5'- and 3'-region of the gene cluster revealed three open reading frames (orf1, orf2, and orf3) which do not code for any ribosomal protein whose structure is known. A putative promoter is located upstream of orf1. Out of the eight ribosomal proteins five have counterparts in eubacteria only, two in both eubacteria and eukaryotes, and one is exclusively related to an eukaryotic ribosomal protein.</description><subject>Amino Acid Sequence</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Codon - genetics</subject><subject>DNA, Bacterial - genetics</subject><subject>Escherichia coli - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>Genes, Bacterial</subject><subject>Genes. Genome</subject><subject>Halobacterium - genetics</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>Multigene Family</subject><subject>Nucleic Acid Hybridization</subject><subject>Oligonucleotide Probes - chemical synthesis</subject><subject>Promoter Regions, Genetic</subject><subject>Restriction Mapping</subject><subject>ribosomal proteins</subject><subject>Ribosomal Proteins - genetics</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Software</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1990</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcGKFDEQhoMo67j6CAtBUPTQmnQ66clJZFFXWNiDCt5COqmeLulO1iSt6Cv40mZ2ht3j5hJCfX9V_fkJOePsDWdcvf3CWMsb3crtK65fC923uukfkA1nW9EIyb8_JJtb5DF5kvMPVk-n-Qk5aTum2q7bkH9XaWcD_rUFY6A2eBpWN0Ms6IFm-LlCcEDjSC3dQQDq5jUXSNRFj2FHx5go4G4qNOEQc1zsTK9TLIAhUwy0TEBtcpOFwbqqw3WhF3aOd6_FJsxLTGXFp-TRaOcMz473Kfn28cPX84vm8urT5_P3l43rOOubUelBQataD6Nidsv14L2vzqzsBHimGIhhGMB513POpAKmZGUUV0ox6cQpeXnoWzetBnMxC2YH82wDxDWbXivOpVD3glz2XV_ZCsoD6FLMOcForhNWZ38MZ2aflrlJy-yjMFybm7RMX3VnxwHrsIC_VR3jqfUXx7rNzs5jssFhvmuue1Hn68o9P3BTzeI3JjADRjfBYloljTKCiX2zdwcI6t_-QkgmO9zH66vAFeMj3rPuf7cMv6g</recordid><startdate>19900225</startdate><enddate>19900225</enddate><creator>Arndt, E</creator><creator>Krömer, W</creator><creator>Hatakeyama, T</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M81</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19900225</creationdate><title>Organization and nucleotide sequence of a gene cluster coding for eight ribosomal proteins in the archaebacterium Halobacterium marismortui</title><author>Arndt, E ; Krömer, W ; Hatakeyama, T</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4107-f69b6e262def60a819bddd004a543ed060e3bbbecdc711056e0659bd6166605c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1990</creationdate><topic>Amino Acid Sequence</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Codon - genetics</topic><topic>DNA, Bacterial - genetics</topic><topic>Escherichia coli - genetics</topic><topic>Fundamental and applied biological sciences. 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The organization of this gene cluster in general corresponds to the S10 operon of Escherichia coli although there exists some differences between them. The sequence analysis of the 5'- and 3'-region of the gene cluster revealed three open reading frames (orf1, orf2, and orf3) which do not code for any ribosomal protein whose structure is known. A putative promoter is located upstream of orf1. Out of the eight ribosomal proteins five have counterparts in eubacteria only, two in both eubacteria and eukaryotes, and one is exclusively related to an eukaryotic ribosomal protein.</abstract><cop>Bethesda, MD</cop><pub>Elsevier Inc</pub><pmid>2406244</pmid><doi>10.1016/S0021-9258(19)39729-7</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | The Journal of biological chemistry, 1990-02, Vol.265 (6), p.3034-3039 |
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| subjects | Amino Acid Sequence Base Sequence Biological and medical sciences Codon - genetics DNA, Bacterial - genetics Escherichia coli - genetics Fundamental and applied biological sciences. Psychology genes Genes, Bacterial Genes. Genome Halobacterium - genetics Molecular and cellular biology Molecular genetics Molecular Sequence Data Multigene Family Nucleic Acid Hybridization Oligonucleotide Probes - chemical synthesis Promoter Regions, Genetic Restriction Mapping ribosomal proteins Ribosomal Proteins - genetics Sequence Homology, Nucleic Acid Software |
| title | Organization and nucleotide sequence of a gene cluster coding for eight ribosomal proteins in the archaebacterium Halobacterium marismortui |
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