A reverse transcription-polymerase chain reaction method to analyze porcine cytokine gene expression
A reverse transcription-polymerase chain reaction (RT-PCR) method was developed in order to provide a highly sensitive, rapid, and simple means of simultaneously measuring the expression of porcine cytokines in immune cell populations. Oligonucleotide primers were designed to amplify porcine cytokin...
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Veröffentlicht in: | Veterinary immunology and immunopathology 1997-09, Vol.58 (3), p.287-300 |
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creator | Dozois, Charles M. Oswald, Eric Gautier, Nadine Serthelon, Jean-Paul Fairbrother, John M. Oswald, Isabelle P. |
description | A reverse transcription-polymerase chain reaction (RT-PCR) method was developed in order to provide a highly sensitive, rapid, and simple means of simultaneously measuring the expression of porcine cytokines in immune cell populations. Oligonucleotide primers were designed to amplify porcine cytokine cDNA from genes encoding IL-1α, IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, IL-12, IFN-γ, TNF-α, TNF-β and the housekeeping genes β-actin and cyclophilin by PCR. Primers were chosen from different exons to detect for possible genomic DNA contamination of samples. To validate RT-PCR, unstimulated and concanavalin A (ConA) stimulated porcine peripheral blood mononuclear cells (PBMCs) were cultured from 2 h to 72 h, RNA was extracted and reverse transcribed, and cDNA was amplified using the different primer sets. Band intensities of PCR products were quantified by densitometric scanning and values were normalized against cyclophilin. For each of the cytokines, the kinetics of gene expression were similar among PBMCs isolated from different animals and could be grouped into two main patterns. Lymphocyte derived cytokines (IL-2, IL-4, IFN-γ, and TNF-β) exhibited low level expression in unstimulated cells and increased expression in ConA-stimulated PBMCs. IFN-γ and IL-2 mRNA levels peaked at 24 h and returned to baseline by 72 h, whereas IL-4 and TNF-β mRNA levels did not return to baseline by 72 h. In contrast, substantial mRNA levels for inflammatory cytokines (IL-1α, IL-1β, IL-6, IL-8, IL-12, and TNF-α) and IL-10 were detected from both unstimulated and ConA-stimulated PBMCs. Results indicate that RT-PCR is a sensitive and convenient method to monitor cytokine mRNA expression in porcine samples. |
doi_str_mv | 10.1016/S0165-2427(97)00039-1 |
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Oligonucleotide primers were designed to amplify porcine cytokine cDNA from genes encoding IL-1α, IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, IL-12, IFN-γ, TNF-α, TNF-β and the housekeeping genes β-actin and cyclophilin by PCR. Primers were chosen from different exons to detect for possible genomic DNA contamination of samples. To validate RT-PCR, unstimulated and concanavalin A (ConA) stimulated porcine peripheral blood mononuclear cells (PBMCs) were cultured from 2 h to 72 h, RNA was extracted and reverse transcribed, and cDNA was amplified using the different primer sets. Band intensities of PCR products were quantified by densitometric scanning and values were normalized against cyclophilin. For each of the cytokines, the kinetics of gene expression were similar among PBMCs isolated from different animals and could be grouped into two main patterns. Lymphocyte derived cytokines (IL-2, IL-4, IFN-γ, and TNF-β) exhibited low level expression in unstimulated cells and increased expression in ConA-stimulated PBMCs. IFN-γ and IL-2 mRNA levels peaked at 24 h and returned to baseline by 72 h, whereas IL-4 and TNF-β mRNA levels did not return to baseline by 72 h. In contrast, substantial mRNA levels for inflammatory cytokines (IL-1α, IL-1β, IL-6, IL-8, IL-12, and TNF-α) and IL-10 were detected from both unstimulated and ConA-stimulated PBMCs. Results indicate that RT-PCR is a sensitive and convenient method to monitor cytokine mRNA expression in porcine samples.</description><identifier>ISSN: 0165-2427</identifier><identifier>EISSN: 1873-2534</identifier><identifier>DOI: 10.1016/S0165-2427(97)00039-1</identifier><identifier>PMID: 9436272</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>actin ; Actins - genetics ; Animals ; biochemical techniques ; complementary DNA ; Cytokine ; cytokines ; Cytokines - genetics ; exons ; gene expression ; immune system ; interferons ; interleukins ; Male ; messenger RNA ; Peptidylprolyl Isomerase - genetics ; polymerase chain reaction ; Polymerase Chain Reaction - methods ; Porcine ; proteins ; RNA, Messenger - analysis ; RT-PCR ; swine ; Swine - immunology ; tumor necrosis factors</subject><ispartof>Veterinary immunology and immunopathology, 1997-09, Vol.58 (3), p.287-300</ispartof><rights>1997</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c481t-853e11960e7f0fb55e897ae62c66bb8dfa16722e71e6e2265db0df9c1089cc0f3</citedby><cites>FETCH-LOGICAL-c481t-853e11960e7f0fb55e897ae62c66bb8dfa16722e71e6e2265db0df9c1089cc0f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/S0165-2427(97)00039-1$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9436272$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dozois, Charles M.</creatorcontrib><creatorcontrib>Oswald, Eric</creatorcontrib><creatorcontrib>Gautier, Nadine</creatorcontrib><creatorcontrib>Serthelon, Jean-Paul</creatorcontrib><creatorcontrib>Fairbrother, John M.</creatorcontrib><creatorcontrib>Oswald, Isabelle P.</creatorcontrib><title>A reverse transcription-polymerase chain reaction method to analyze porcine cytokine gene expression</title><title>Veterinary immunology and immunopathology</title><addtitle>Vet Immunol Immunopathol</addtitle><description>A reverse transcription-polymerase chain reaction (RT-PCR) method was developed in order to provide a highly sensitive, rapid, and simple means of simultaneously measuring the expression of porcine cytokines in immune cell populations. Oligonucleotide primers were designed to amplify porcine cytokine cDNA from genes encoding IL-1α, IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, IL-12, IFN-γ, TNF-α, TNF-β and the housekeeping genes β-actin and cyclophilin by PCR. Primers were chosen from different exons to detect for possible genomic DNA contamination of samples. To validate RT-PCR, unstimulated and concanavalin A (ConA) stimulated porcine peripheral blood mononuclear cells (PBMCs) were cultured from 2 h to 72 h, RNA was extracted and reverse transcribed, and cDNA was amplified using the different primer sets. Band intensities of PCR products were quantified by densitometric scanning and values were normalized against cyclophilin. For each of the cytokines, the kinetics of gene expression were similar among PBMCs isolated from different animals and could be grouped into two main patterns. Lymphocyte derived cytokines (IL-2, IL-4, IFN-γ, and TNF-β) exhibited low level expression in unstimulated cells and increased expression in ConA-stimulated PBMCs. IFN-γ and IL-2 mRNA levels peaked at 24 h and returned to baseline by 72 h, whereas IL-4 and TNF-β mRNA levels did not return to baseline by 72 h. In contrast, substantial mRNA levels for inflammatory cytokines (IL-1α, IL-1β, IL-6, IL-8, IL-12, and TNF-α) and IL-10 were detected from both unstimulated and ConA-stimulated PBMCs. Results indicate that RT-PCR is a sensitive and convenient method to monitor cytokine mRNA expression in porcine samples.</description><subject>actin</subject><subject>Actins - genetics</subject><subject>Animals</subject><subject>biochemical techniques</subject><subject>complementary DNA</subject><subject>Cytokine</subject><subject>cytokines</subject><subject>Cytokines - genetics</subject><subject>exons</subject><subject>gene expression</subject><subject>immune system</subject><subject>interferons</subject><subject>interleukins</subject><subject>Male</subject><subject>messenger RNA</subject><subject>Peptidylprolyl Isomerase - genetics</subject><subject>polymerase chain reaction</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Porcine</subject><subject>proteins</subject><subject>RNA, Messenger - analysis</subject><subject>RT-PCR</subject><subject>swine</subject><subject>Swine - immunology</subject><subject>tumor necrosis factors</subject><issn>0165-2427</issn><issn>1873-2534</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkTtP5DAUhS20CGaBn4BItYIi4Ef8qhBCsLsSEgVQW45zA4YkDnYGMfx6HGZES3Nt6Xz3oXMQOiT4lGAizu5y4SWtqDzW8gRjzHRJttCCKMlKyln1Cy2-kV30O6XnDHGt1A7a0RUTVNIFai6KCG8QExRTtENy0Y-TD0M5hm7VQ7RZcE_WDxmzblaKHqan0BRTKOxgu9UHFGOIzg8ZXE3hZf48Qi7wPkZIKbfso-3WdgkONu8eeri-ur_8V97c_v1_eXFTukqRqVScASFaYJAtbmvOQWlpQVAnRF2rprVESEpBEhBAqeBNjZtWO4KVdg63bA_9Wc8dY3hdQppM75ODrrMDhGUyUnMiK0Z-BImglcCaZZCvQRdDShFaM0bf27gyBJs5BvMVg5k9NlqarxjMvOBws2BZ99B8d218z_rRWm9tMPYx-mQe7igmDFOlMcfzhPM1AdmwNw_RJOdhcND4CG4yTfA_3PAJ3Z-iPg</recordid><startdate>19970919</startdate><enddate>19970919</enddate><creator>Dozois, Charles M.</creator><creator>Oswald, Eric</creator><creator>Gautier, Nadine</creator><creator>Serthelon, Jean-Paul</creator><creator>Fairbrother, John M.</creator><creator>Oswald, Isabelle P.</creator><general>Elsevier B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T5</scope><scope>H94</scope><scope>7X8</scope></search><sort><creationdate>19970919</creationdate><title>A reverse transcription-polymerase chain reaction method to analyze porcine cytokine gene expression</title><author>Dozois, Charles M. ; Oswald, Eric ; Gautier, Nadine ; Serthelon, Jean-Paul ; Fairbrother, John M. ; Oswald, Isabelle P.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c481t-853e11960e7f0fb55e897ae62c66bb8dfa16722e71e6e2265db0df9c1089cc0f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>actin</topic><topic>Actins - genetics</topic><topic>Animals</topic><topic>biochemical techniques</topic><topic>complementary DNA</topic><topic>Cytokine</topic><topic>cytokines</topic><topic>Cytokines - genetics</topic><topic>exons</topic><topic>gene expression</topic><topic>immune system</topic><topic>interferons</topic><topic>interleukins</topic><topic>Male</topic><topic>messenger RNA</topic><topic>Peptidylprolyl Isomerase - genetics</topic><topic>polymerase chain reaction</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Porcine</topic><topic>proteins</topic><topic>RNA, Messenger - analysis</topic><topic>RT-PCR</topic><topic>swine</topic><topic>Swine - immunology</topic><topic>tumor necrosis factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dozois, Charles M.</creatorcontrib><creatorcontrib>Oswald, Eric</creatorcontrib><creatorcontrib>Gautier, Nadine</creatorcontrib><creatorcontrib>Serthelon, Jean-Paul</creatorcontrib><creatorcontrib>Fairbrother, John M.</creatorcontrib><creatorcontrib>Oswald, Isabelle P.</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Immunology Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Veterinary immunology and immunopathology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dozois, Charles M.</au><au>Oswald, Eric</au><au>Gautier, Nadine</au><au>Serthelon, Jean-Paul</au><au>Fairbrother, John M.</au><au>Oswald, Isabelle P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A reverse transcription-polymerase chain reaction method to analyze porcine cytokine gene expression</atitle><jtitle>Veterinary immunology and immunopathology</jtitle><addtitle>Vet Immunol Immunopathol</addtitle><date>1997-09-19</date><risdate>1997</risdate><volume>58</volume><issue>3</issue><spage>287</spage><epage>300</epage><pages>287-300</pages><issn>0165-2427</issn><eissn>1873-2534</eissn><abstract>A reverse transcription-polymerase chain reaction (RT-PCR) method was developed in order to provide a highly sensitive, rapid, and simple means of simultaneously measuring the expression of porcine cytokines in immune cell populations. Oligonucleotide primers were designed to amplify porcine cytokine cDNA from genes encoding IL-1α, IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, IL-12, IFN-γ, TNF-α, TNF-β and the housekeeping genes β-actin and cyclophilin by PCR. Primers were chosen from different exons to detect for possible genomic DNA contamination of samples. To validate RT-PCR, unstimulated and concanavalin A (ConA) stimulated porcine peripheral blood mononuclear cells (PBMCs) were cultured from 2 h to 72 h, RNA was extracted and reverse transcribed, and cDNA was amplified using the different primer sets. Band intensities of PCR products were quantified by densitometric scanning and values were normalized against cyclophilin. For each of the cytokines, the kinetics of gene expression were similar among PBMCs isolated from different animals and could be grouped into two main patterns. Lymphocyte derived cytokines (IL-2, IL-4, IFN-γ, and TNF-β) exhibited low level expression in unstimulated cells and increased expression in ConA-stimulated PBMCs. IFN-γ and IL-2 mRNA levels peaked at 24 h and returned to baseline by 72 h, whereas IL-4 and TNF-β mRNA levels did not return to baseline by 72 h. In contrast, substantial mRNA levels for inflammatory cytokines (IL-1α, IL-1β, IL-6, IL-8, IL-12, and TNF-α) and IL-10 were detected from both unstimulated and ConA-stimulated PBMCs. Results indicate that RT-PCR is a sensitive and convenient method to monitor cytokine mRNA expression in porcine samples.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>9436272</pmid><doi>10.1016/S0165-2427(97)00039-1</doi><tpages>14</tpages></addata></record> |
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subjects | actin Actins - genetics Animals biochemical techniques complementary DNA Cytokine cytokines Cytokines - genetics exons gene expression immune system interferons interleukins Male messenger RNA Peptidylprolyl Isomerase - genetics polymerase chain reaction Polymerase Chain Reaction - methods Porcine proteins RNA, Messenger - analysis RT-PCR swine Swine - immunology tumor necrosis factors |
title | A reverse transcription-polymerase chain reaction method to analyze porcine cytokine gene expression |
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