Coat Protein of Melon Necrotic Spot Carmovirus is More Similar to Those of Tombusviruses than Those of Carmoviruses
1 Research Station, Agriculture Canada, 6660 Northwest Marine Drive, Vancouver, British Columbia, Canada V6T 1X2 and 2 Agricultural University, P.O. Box 8045, 6700 EM Wageningen, The Netherlands Complementary DNA copies of the genomic RNA of melon necrotic spot virus (MNSV) have been cloned and the...
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Veröffentlicht in: | Journal of general virology 1989-11, Vol.70 (11), p.3033-3042 |
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creator | Riviere, C. J Pot, J Tremaine, J. H Rochon, D. M |
description | 1 Research Station, Agriculture Canada, 6660 Northwest Marine Drive, Vancouver, British Columbia, Canada V6T 1X2
and 2 Agricultural University, P.O. Box 8045, 6700 EM Wageningen, The Netherlands
Complementary DNA copies of the genomic RNA of melon necrotic spot virus (MNSV) have been cloned and the region deduced to encode the coat protein has been sequenced. The putative coat protein coding region, located near the 3' end of the genome, consists of 1170 nucleotides and has the potential to encode a 390 amino acid protein of M r 41840. Our data show that although MNSV is a carmovirus, its coat protein more closely resembles those of the tombusviruses than those of the carmoviruses sequenced to date, in both the extent of sequence similarity and in the length of the random/arm and protruding domains of the coat protein. Furthermore, dot matrix comparisons revealed sequence similarity between the coat protein protruding domains of MNSV and the cucumber necrosis tombusvirus. This similarity may be involved in one or more of the biological properties these two viruses share, such as the ability to infect cucumbers naturally and to be transmitted by the soil-inhabiting fungus Olpidium radicale .
Keywords: MNSV, carmovirus, tombusvirus, coat protein sequence
Received 17 April 1989;
accepted 26 June 1989. |
doi_str_mv | 10.1099/0022-1317-70-11-3033 |
format | Article |
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and 2 Agricultural University, P.O. Box 8045, 6700 EM Wageningen, The Netherlands
Complementary DNA copies of the genomic RNA of melon necrotic spot virus (MNSV) have been cloned and the region deduced to encode the coat protein has been sequenced. The putative coat protein coding region, located near the 3' end of the genome, consists of 1170 nucleotides and has the potential to encode a 390 amino acid protein of M r 41840. Our data show that although MNSV is a carmovirus, its coat protein more closely resembles those of the tombusviruses than those of the carmoviruses sequenced to date, in both the extent of sequence similarity and in the length of the random/arm and protruding domains of the coat protein. Furthermore, dot matrix comparisons revealed sequence similarity between the coat protein protruding domains of MNSV and the cucumber necrosis tombusvirus. This similarity may be involved in one or more of the biological properties these two viruses share, such as the ability to infect cucumbers naturally and to be transmitted by the soil-inhabiting fungus Olpidium radicale .
Keywords: MNSV, carmovirus, tombusvirus, coat protein sequence
Received 17 April 1989;
accepted 26 June 1989.</description><identifier>ISSN: 0022-1317</identifier><identifier>EISSN: 1465-2099</identifier><identifier>DOI: 10.1099/0022-1317-70-11-3033</identifier><identifier>PMID: 2584953</identifier><identifier>CODEN: JGVIAY</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Amino Acid Sequence ; Base Sequence ; Biological and medical sciences ; Blotting, Northern ; Capsid - genetics ; Cloning, Molecular ; coat protein ; DNA - genetics ; Fundamental and applied biological sciences. Psychology ; Genes, Viral ; Genetics ; Microbiology ; Molecular Sequence Data ; Plant Viruses - genetics ; Restriction Mapping ; RNA, Viral - genetics ; tombusvirus ; Viral Structural Proteins - genetics ; Virology</subject><ispartof>Journal of general virology, 1989-11, Vol.70 (11), p.3033-3042</ispartof><rights>1990 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c442t-fdb91f0de18fc04bd2c5c0015877058ffdbbb247d5fa93b57cec6a4153ed766c3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3746,3747,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=6617606$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/2584953$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Riviere, C. J</creatorcontrib><creatorcontrib>Pot, J</creatorcontrib><creatorcontrib>Tremaine, J. H</creatorcontrib><creatorcontrib>Rochon, D. M</creatorcontrib><title>Coat Protein of Melon Necrotic Spot Carmovirus is More Similar to Those of Tombusviruses than Those of Carmoviruses</title><title>Journal of general virology</title><addtitle>J Gen Virol</addtitle><description>1 Research Station, Agriculture Canada, 6660 Northwest Marine Drive, Vancouver, British Columbia, Canada V6T 1X2
and 2 Agricultural University, P.O. Box 8045, 6700 EM Wageningen, The Netherlands
Complementary DNA copies of the genomic RNA of melon necrotic spot virus (MNSV) have been cloned and the region deduced to encode the coat protein has been sequenced. The putative coat protein coding region, located near the 3' end of the genome, consists of 1170 nucleotides and has the potential to encode a 390 amino acid protein of M r 41840. Our data show that although MNSV is a carmovirus, its coat protein more closely resembles those of the tombusviruses than those of the carmoviruses sequenced to date, in both the extent of sequence similarity and in the length of the random/arm and protruding domains of the coat protein. Furthermore, dot matrix comparisons revealed sequence similarity between the coat protein protruding domains of MNSV and the cucumber necrosis tombusvirus. This similarity may be involved in one or more of the biological properties these two viruses share, such as the ability to infect cucumbers naturally and to be transmitted by the soil-inhabiting fungus Olpidium radicale .
Keywords: MNSV, carmovirus, tombusvirus, coat protein sequence
Received 17 April 1989;
accepted 26 June 1989.</description><subject>Amino Acid Sequence</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Blotting, Northern</subject><subject>Capsid - genetics</subject><subject>Cloning, Molecular</subject><subject>coat protein</subject><subject>DNA - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes, Viral</subject><subject>Genetics</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Plant Viruses - genetics</subject><subject>Restriction Mapping</subject><subject>RNA, Viral - genetics</subject><subject>tombusvirus</subject><subject>Viral Structural Proteins - genetics</subject><subject>Virology</subject><issn>0022-1317</issn><issn>1465-2099</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1989</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1O3DAUha2qiE5p3wAkL6pKLEL978kSjSitBLQS07XlONeMqyQe7KSob4_TGQ3surJ0z3eO7XMROqXkgpK6_kIIYxXlVFeaVJRWnHD-Bi2oULJiBXiLFgfkHXqf829CqBBSH6NjJpeilnyB8iraEf9McYQw4OjxLXRxwHfgyig4fL-NI17Z1Mc_IU0Zh4xvYwJ8H_rQ2YTHiNebmGG2rmPfTPkfBxmPGzu8aC8RkD-gI2-7DB_35wn69fVqvfpW3fy4_r66vKmcEGysfNvU1JMW6NI7IpqWOenKF-RSayKXvuhNw4Rupbc1b6R24JQVVHJotVKOn6DPu9xtio8T5NH0ITvoOjtAnLLRNeeaE_FfsETWTCtWQLEDSzs5J_Bmm0Jv019DiZmXYubGzdy40WVCzbyUYjvb509ND-3BtN9C0T_tdZud7Xyygwv5gClFtSKqYOc7bBMeNk8hgXmAoQ_lLU2IppT76spnMHqjyw</recordid><startdate>19891101</startdate><enddate>19891101</enddate><creator>Riviere, C. J</creator><creator>Pot, J</creator><creator>Tremaine, J. H</creator><creator>Rochon, D. M</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M81</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>19891101</creationdate><title>Coat Protein of Melon Necrotic Spot Carmovirus is More Similar to Those of Tombusviruses than Those of Carmoviruses</title><author>Riviere, C. J ; Pot, J ; Tremaine, J. H ; Rochon, D. M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c442t-fdb91f0de18fc04bd2c5c0015877058ffdbbb247d5fa93b57cec6a4153ed766c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1989</creationdate><topic>Amino Acid Sequence</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Blotting, Northern</topic><topic>Capsid - genetics</topic><topic>Cloning, Molecular</topic><topic>coat protein</topic><topic>DNA - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes, Viral</topic><topic>Genetics</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Plant Viruses - genetics</topic><topic>Restriction Mapping</topic><topic>RNA, Viral - genetics</topic><topic>tombusvirus</topic><topic>Viral Structural Proteins - genetics</topic><topic>Virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Riviere, C. J</creatorcontrib><creatorcontrib>Pot, J</creatorcontrib><creatorcontrib>Tremaine, J. H</creatorcontrib><creatorcontrib>Rochon, D. M</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biochemistry Abstracts 3</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of general virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Riviere, C. J</au><au>Pot, J</au><au>Tremaine, J. H</au><au>Rochon, D. M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Coat Protein of Melon Necrotic Spot Carmovirus is More Similar to Those of Tombusviruses than Those of Carmoviruses</atitle><jtitle>Journal of general virology</jtitle><addtitle>J Gen Virol</addtitle><date>1989-11-01</date><risdate>1989</risdate><volume>70</volume><issue>11</issue><spage>3033</spage><epage>3042</epage><pages>3033-3042</pages><issn>0022-1317</issn><eissn>1465-2099</eissn><coden>JGVIAY</coden><abstract>1 Research Station, Agriculture Canada, 6660 Northwest Marine Drive, Vancouver, British Columbia, Canada V6T 1X2
and 2 Agricultural University, P.O. Box 8045, 6700 EM Wageningen, The Netherlands
Complementary DNA copies of the genomic RNA of melon necrotic spot virus (MNSV) have been cloned and the region deduced to encode the coat protein has been sequenced. The putative coat protein coding region, located near the 3' end of the genome, consists of 1170 nucleotides and has the potential to encode a 390 amino acid protein of M r 41840. Our data show that although MNSV is a carmovirus, its coat protein more closely resembles those of the tombusviruses than those of the carmoviruses sequenced to date, in both the extent of sequence similarity and in the length of the random/arm and protruding domains of the coat protein. Furthermore, dot matrix comparisons revealed sequence similarity between the coat protein protruding domains of MNSV and the cucumber necrosis tombusvirus. This similarity may be involved in one or more of the biological properties these two viruses share, such as the ability to infect cucumbers naturally and to be transmitted by the soil-inhabiting fungus Olpidium radicale .
Keywords: MNSV, carmovirus, tombusvirus, coat protein sequence
Received 17 April 1989;
accepted 26 June 1989.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>2584953</pmid><doi>10.1099/0022-1317-70-11-3033</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Base Sequence Biological and medical sciences Blotting, Northern Capsid - genetics Cloning, Molecular coat protein DNA - genetics Fundamental and applied biological sciences. Psychology Genes, Viral Genetics Microbiology Molecular Sequence Data Plant Viruses - genetics Restriction Mapping RNA, Viral - genetics tombusvirus Viral Structural Proteins - genetics Virology |
title | Coat Protein of Melon Necrotic Spot Carmovirus is More Similar to Those of Tombusviruses than Those of Carmoviruses |
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