The effect of point mutations on the free energy of transmembrane α-helix dimerization
Glycophorin A forms homodimers through interaction of the single, helical transmembrane domains of the monomers. The dimers are stable in sodium dodecylsulfate (SDS), permitting a number of studies that have identified a critical motif of residues that mediates dimer formation. We have used analytic...
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description | Glycophorin A forms homodimers through interaction of the single, helical transmembrane domains of the monomers. The dimers are stable in sodium dodecylsulfate (SDS), permitting a number of studies that have identified a critical motif of residues that mediates dimer formation. We have used analytical ultracentrifugation to measure the energy of dimerization in a non-denaturing detergent solution and have observed the changes in energy arising from two of the mutants previously studied. Use of the detergent pentaoxyethylene octyl ether (C
8E
5) is a great advantage, since its micelles are neutrally buoyant and the detergent allows a reversible association to occur between monomer and dimer states of the glycophorin A transmembrane helices during the time-scale of sedimentation equilibrium. Use of this detergent in analytical ultracentrifugation may enable a wide range of studies of molecular association events in membrane proteins.
We find that the glycophorin A transmembrane helix dimerizes with a dissociation constant of 240(±50) nM, corresponding to a free energy of dissociation of 9.0(±0.1) kcal mol
−1. Point mutants that were found to be disruptive in SDS (L75A, I76A) reduced the dimer affinity in the C
8E
5 detergent environment (
K
d = 1.7(±0.2) μM and 4.2(±0.9) μM, respectively). Thus, the earlier findings are placed on a quantitative, relative energy scale of association by our measurements. Molecular modeling and simulations suggest that the energy differences can be accounted for as changes in van der Waals interactions between helices. |
doi_str_mv | 10.1006/jmbi.1997.1236 |
format | Article |
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8E
5) is a great advantage, since its micelles are neutrally buoyant and the detergent allows a reversible association to occur between monomer and dimer states of the glycophorin A transmembrane helices during the time-scale of sedimentation equilibrium. Use of this detergent in analytical ultracentrifugation may enable a wide range of studies of molecular association events in membrane proteins.
We find that the glycophorin A transmembrane helix dimerizes with a dissociation constant of 240(±50) nM, corresponding to a free energy of dissociation of 9.0(±0.1) kcal mol
−1. Point mutants that were found to be disruptive in SDS (L75A, I76A) reduced the dimer affinity in the C
8E
5 detergent environment (
K
d = 1.7(±0.2) μM and 4.2(±0.9) μM, respectively). Thus, the earlier findings are placed on a quantitative, relative energy scale of association by our measurements. Molecular modeling and simulations suggest that the energy differences can be accounted for as changes in van der Waals interactions between helices.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1006/jmbi.1997.1236</identifier><identifier>PMID: 9299353</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>C 8E 5 ; Cell Membrane - chemistry ; Computer Simulation ; Detergents ; Dimerization ; Escherichia coli - genetics ; Glycophorin - chemistry ; Glycophorin - genetics ; glycophorin A ; membrane protein ; Micelles ; Point Mutation - physiology ; Protein Structure, Secondary ; Recombinant Fusion Proteins ; Thermodynamics ; two-stage model ; ultracentrifugation ; Ultracentrifugation - methods</subject><ispartof>Journal of molecular biology, 1997-09, Vol.272 (2), p.266-275</ispartof><rights>1997 Academic Press</rights><rights>Copyright 1997 Academic Press Limited.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c410t-176486615976c4a09594b123f5244da9ef80175e7fd2fc5b44490b4a9bcf6f353</citedby><cites>FETCH-LOGICAL-c410t-176486615976c4a09594b123f5244da9ef80175e7fd2fc5b44490b4a9bcf6f353</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1006/jmbi.1997.1236$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9299353$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fleming, Karen G</creatorcontrib><creatorcontrib>Ackerman, Anne L</creatorcontrib><creatorcontrib>Engelman, Donald M</creatorcontrib><title>The effect of point mutations on the free energy of transmembrane α-helix dimerization</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>Glycophorin A forms homodimers through interaction of the single, helical transmembrane domains of the monomers. The dimers are stable in sodium dodecylsulfate (SDS), permitting a number of studies that have identified a critical motif of residues that mediates dimer formation. We have used analytical ultracentrifugation to measure the energy of dimerization in a non-denaturing detergent solution and have observed the changes in energy arising from two of the mutants previously studied. Use of the detergent pentaoxyethylene octyl ether (C
8E
5) is a great advantage, since its micelles are neutrally buoyant and the detergent allows a reversible association to occur between monomer and dimer states of the glycophorin A transmembrane helices during the time-scale of sedimentation equilibrium. Use of this detergent in analytical ultracentrifugation may enable a wide range of studies of molecular association events in membrane proteins.
We find that the glycophorin A transmembrane helix dimerizes with a dissociation constant of 240(±50) nM, corresponding to a free energy of dissociation of 9.0(±0.1) kcal mol
−1. Point mutants that were found to be disruptive in SDS (L75A, I76A) reduced the dimer affinity in the C
8E
5 detergent environment (
K
d = 1.7(±0.2) μM and 4.2(±0.9) μM, respectively). Thus, the earlier findings are placed on a quantitative, relative energy scale of association by our measurements. Molecular modeling and simulations suggest that the energy differences can be accounted for as changes in van der Waals interactions between helices.</description><subject>C 8E 5</subject><subject>Cell Membrane - chemistry</subject><subject>Computer Simulation</subject><subject>Detergents</subject><subject>Dimerization</subject><subject>Escherichia coli - genetics</subject><subject>Glycophorin - chemistry</subject><subject>Glycophorin - genetics</subject><subject>glycophorin A</subject><subject>membrane protein</subject><subject>Micelles</subject><subject>Point Mutation - physiology</subject><subject>Protein Structure, Secondary</subject><subject>Recombinant Fusion Proteins</subject><subject>Thermodynamics</subject><subject>two-stage model</subject><subject>ultracentrifugation</subject><subject>Ultracentrifugation - methods</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkLtOwzAUhi0EKqWwsiFlYkuwHceXEVXcpEosIEYrcY6pqyYpdooob8WL8Ew4bcWGmM5wvv_XOR9C5wRnBGN-tWgqlxGlREZozg_QmGCpUslzeYjGGFOaUpnzY3QSwgJjXORMjtBIUaXyIh-jl6c5JGAtmD7pbLLqXNsnzbove9e1IenapI-A9RCpFvzrZqB6X7ahgaaKE5Lvr3QOS_eR1K4B7z630VN0ZMtlgLP9nKDn25un6X06e7x7mF7PUsMI7lMiOJOck0IJbliJVaFYFR-xBWWsLhVYiYkoQNiaWlNUjDGFK1aqylhu4wcTdLnrXfnubQ2h140LBpbLeFm3DlooKoXg9F-QcCqY2DZmO9D4LgQPVq-8a0q_0QTrQbkelOtBuR6Ux8DFvnldNVD_4nvHcS93e4ge3h14HYyD1kDtfNSu6879Vf0DwYWQbg</recordid><startdate>19970919</startdate><enddate>19970919</enddate><creator>Fleming, Karen G</creator><creator>Ackerman, Anne L</creator><creator>Engelman, Donald M</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7X8</scope></search><sort><creationdate>19970919</creationdate><title>The effect of point mutations on the free energy of transmembrane α-helix dimerization</title><author>Fleming, Karen G ; Ackerman, Anne L ; Engelman, Donald M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c410t-176486615976c4a09594b123f5244da9ef80175e7fd2fc5b44490b4a9bcf6f353</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>C 8E 5</topic><topic>Cell Membrane - chemistry</topic><topic>Computer Simulation</topic><topic>Detergents</topic><topic>Dimerization</topic><topic>Escherichia coli - genetics</topic><topic>Glycophorin - chemistry</topic><topic>Glycophorin - genetics</topic><topic>glycophorin A</topic><topic>membrane protein</topic><topic>Micelles</topic><topic>Point Mutation - physiology</topic><topic>Protein Structure, Secondary</topic><topic>Recombinant Fusion Proteins</topic><topic>Thermodynamics</topic><topic>two-stage model</topic><topic>ultracentrifugation</topic><topic>Ultracentrifugation - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fleming, Karen G</creatorcontrib><creatorcontrib>Ackerman, Anne L</creatorcontrib><creatorcontrib>Engelman, Donald M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fleming, Karen G</au><au>Ackerman, Anne L</au><au>Engelman, Donald M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The effect of point mutations on the free energy of transmembrane α-helix dimerization</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>1997-09-19</date><risdate>1997</risdate><volume>272</volume><issue>2</issue><spage>266</spage><epage>275</epage><pages>266-275</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>Glycophorin A forms homodimers through interaction of the single, helical transmembrane domains of the monomers. The dimers are stable in sodium dodecylsulfate (SDS), permitting a number of studies that have identified a critical motif of residues that mediates dimer formation. We have used analytical ultracentrifugation to measure the energy of dimerization in a non-denaturing detergent solution and have observed the changes in energy arising from two of the mutants previously studied. Use of the detergent pentaoxyethylene octyl ether (C
8E
5) is a great advantage, since its micelles are neutrally buoyant and the detergent allows a reversible association to occur between monomer and dimer states of the glycophorin A transmembrane helices during the time-scale of sedimentation equilibrium. Use of this detergent in analytical ultracentrifugation may enable a wide range of studies of molecular association events in membrane proteins.
We find that the glycophorin A transmembrane helix dimerizes with a dissociation constant of 240(±50) nM, corresponding to a free energy of dissociation of 9.0(±0.1) kcal mol
−1. Point mutants that were found to be disruptive in SDS (L75A, I76A) reduced the dimer affinity in the C
8E
5 detergent environment (
K
d = 1.7(±0.2) μM and 4.2(±0.9) μM, respectively). Thus, the earlier findings are placed on a quantitative, relative energy scale of association by our measurements. Molecular modeling and simulations suggest that the energy differences can be accounted for as changes in van der Waals interactions between helices.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>9299353</pmid><doi>10.1006/jmbi.1997.1236</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | C 8E 5 Cell Membrane - chemistry Computer Simulation Detergents Dimerization Escherichia coli - genetics Glycophorin - chemistry Glycophorin - genetics glycophorin A membrane protein Micelles Point Mutation - physiology Protein Structure, Secondary Recombinant Fusion Proteins Thermodynamics two-stage model ultracentrifugation Ultracentrifugation - methods |
title | The effect of point mutations on the free energy of transmembrane α-helix dimerization |
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