The gene for the human interleukin-11 receptor alpha chain locus is highly homologous to the murine gene and contains alternatively spliced first exons
The gene for the murine interleukin-11 receptor α chain (mIL-11Rα) contains two loci (1 and 2), of which locus 2 is restricted to only some mouse strains. Two alternatively spliced exons (1a and 1b) encode the 5′ untranslated region (5′UTR) of the murine locus 1. We have characterized the gene for t...
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Veröffentlicht in: | The international journal of biochemistry & cell biology 1997-05, Vol.29 (5), p.753-766 |
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creator | Nandurkar, Harshal H. Robb, Lorraine Nicholl, Jillian K. Hilton, Douglas J. Sutherland, Grant R. Begley, C.Glenn |
description | The gene for the murine interleukin-11 receptor α chain (mIL-11Rα) contains two loci (1 and 2), of which locus 2 is restricted to only some mouse strains. Two alternatively spliced exons (1a and 1b) encode the 5′ untranslated region (5′UTR) of the murine locus 1. We have characterized the gene for the human interleukin-11 receptor α chain locus (hIL-11Rα), examined its expression by Northern analysis and determined its chromosomal location by fluorescence
in situ hybridization. The presence of exon(s) encoding the 5′UTR and mapping of transcription initiation sites was determined by reverse-transcriptase polymerase chain reaction and 5′ rapid amplification of cDNA ends (5′RACE) techniques. The human locus spanned 10 kilobasepairs (kb) and consisted of 14 exons. Two alternatively spliced first exons (1a and 1b) encoding the 5′UTR were identified and shared 76 and 73% nucleotide identity with murine exons 1a and 1b. Multiple transcription start sites were demonstrated for human exon 1a. The promoter regions of both human exons 1a and 1b did not display a canonical TATA box. A predominant 1.8 kb transcript for the hIL-11Rα was present in heart, brain, skeletal muscle, lymph nodes, thymus, appendix, pancreas and foetal liver. The hIL-11Rα gene was localized to chromosome 9p13. In summary, the hIL-11Rα gene was highly related to locus 1 of the murine gene and there was no evidence of a second hIL-11Rα locus. |
doi_str_mv | 10.1016/S1357-2725(97)00011-3 |
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in situ hybridization. The presence of exon(s) encoding the 5′UTR and mapping of transcription initiation sites was determined by reverse-transcriptase polymerase chain reaction and 5′ rapid amplification of cDNA ends (5′RACE) techniques. The human locus spanned 10 kilobasepairs (kb) and consisted of 14 exons. Two alternatively spliced first exons (1a and 1b) encoding the 5′UTR were identified and shared 76 and 73% nucleotide identity with murine exons 1a and 1b. Multiple transcription start sites were demonstrated for human exon 1a. The promoter regions of both human exons 1a and 1b did not display a canonical TATA box. A predominant 1.8 kb transcript for the hIL-11Rα was present in heart, brain, skeletal muscle, lymph nodes, thymus, appendix, pancreas and foetal liver. The hIL-11Rα gene was localized to chromosome 9p13. In summary, the hIL-11Rα gene was highly related to locus 1 of the murine gene and there was no evidence of a second hIL-11Rα locus.</description><identifier>ISSN: 1357-2725</identifier><identifier>EISSN: 1878-5875</identifier><identifier>DOI: 10.1016/S1357-2725(97)00011-3</identifier><identifier>PMID: 9251243</identifier><language>eng</language><publisher>Netherlands: Elsevier Ltd</publisher><subject>Alternative Splicing ; Animals ; Base Sequence ; Chromosome Mapping ; Chromosomes, Human, Pair 9 ; Cytokine receptor ; DNA ; Exons ; Gene structure ; hIL-11Rα ; Humans ; Interleukin-11 receptor ; Interleukin-11 Receptor alpha Subunit ; Mice ; Molecular Sequence Data ; Promoter Regions, Genetic ; Receptors, Interleukin - genetics ; Receptors, Interleukin-11 ; Restriction Mapping ; Transcription, Genetic</subject><ispartof>The international journal of biochemistry & cell biology, 1997-05, Vol.29 (5), p.753-766</ispartof><rights>1997</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c360t-aa7ba227bc22e192879f625d647313f025c7044a91c07ba0948aaae10f876a973</citedby><cites>FETCH-LOGICAL-c360t-aa7ba227bc22e192879f625d647313f025c7044a91c07ba0948aaae10f876a973</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1357272597000113$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9251243$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nandurkar, Harshal H.</creatorcontrib><creatorcontrib>Robb, Lorraine</creatorcontrib><creatorcontrib>Nicholl, Jillian K.</creatorcontrib><creatorcontrib>Hilton, Douglas J.</creatorcontrib><creatorcontrib>Sutherland, Grant R.</creatorcontrib><creatorcontrib>Begley, C.Glenn</creatorcontrib><title>The gene for the human interleukin-11 receptor alpha chain locus is highly homologous to the murine gene and contains alternatively spliced first exons</title><title>The international journal of biochemistry & cell biology</title><addtitle>Int J Biochem Cell Biol</addtitle><description>The gene for the murine interleukin-11 receptor α chain (mIL-11Rα) contains two loci (1 and 2), of which locus 2 is restricted to only some mouse strains. Two alternatively spliced exons (1a and 1b) encode the 5′ untranslated region (5′UTR) of the murine locus 1. We have characterized the gene for the human interleukin-11 receptor α chain locus (hIL-11Rα), examined its expression by Northern analysis and determined its chromosomal location by fluorescence
in situ hybridization. The presence of exon(s) encoding the 5′UTR and mapping of transcription initiation sites was determined by reverse-transcriptase polymerase chain reaction and 5′ rapid amplification of cDNA ends (5′RACE) techniques. The human locus spanned 10 kilobasepairs (kb) and consisted of 14 exons. Two alternatively spliced first exons (1a and 1b) encoding the 5′UTR were identified and shared 76 and 73% nucleotide identity with murine exons 1a and 1b. Multiple transcription start sites were demonstrated for human exon 1a. The promoter regions of both human exons 1a and 1b did not display a canonical TATA box. A predominant 1.8 kb transcript for the hIL-11Rα was present in heart, brain, skeletal muscle, lymph nodes, thymus, appendix, pancreas and foetal liver. The hIL-11Rα gene was localized to chromosome 9p13. In summary, the hIL-11Rα gene was highly related to locus 1 of the murine gene and there was no evidence of a second hIL-11Rα locus.</description><subject>Alternative Splicing</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Chromosome Mapping</subject><subject>Chromosomes, Human, Pair 9</subject><subject>Cytokine receptor</subject><subject>DNA</subject><subject>Exons</subject><subject>Gene structure</subject><subject>hIL-11Rα</subject><subject>Humans</subject><subject>Interleukin-11 receptor</subject><subject>Interleukin-11 Receptor alpha Subunit</subject><subject>Mice</subject><subject>Molecular Sequence Data</subject><subject>Promoter Regions, Genetic</subject><subject>Receptors, Interleukin - genetics</subject><subject>Receptors, Interleukin-11</subject><subject>Restriction Mapping</subject><subject>Transcription, Genetic</subject><issn>1357-2725</issn><issn>1878-5875</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkctu1TAQhi0EKqXwCJW8QrAI-BLH8QqhqtBKlbpou7Z8nMmJwbGD7VT0SXhdfC6w7cqX-f5_NPMjdE7JJ0po9_mOciEbJpn4oORHQgilDX-BTmkv-0b0Urys93_Ia_Qm5x87SDB-gk4UE5S1_BT9uZ8AbyEAHmPCpT6mdTYBu1AgeVh_utBQihNYWEoljF8mg-1kXMA-2jVjl_HktpN_wlOco4_bWD9L3HvNa3Lh6G_CgG0MpSpztan2wRT3CFWYF-8sDHh0KRcMv2PIb9Gr0fgM747nGXr4dnl_cdXc3H6_vvh601jekdIYIzeGMbmxjAFVrJdq7JgYulZyykfChJWkbY2illSSqLY3xgAlYy87oyQ_Q-8PvkuKv1bIRc8uW_DeBKiDaKloT2VPKigOoE0x5wSjXpKbTXrSlOhdIHofiN5tWyup94FoXnXnxwbrZobhv-qYQK1_OdShTvnoIOlsHYS6DleXXvQQ3TMd_gLzNJza</recordid><startdate>19970501</startdate><enddate>19970501</enddate><creator>Nandurkar, Harshal H.</creator><creator>Robb, Lorraine</creator><creator>Nicholl, Jillian K.</creator><creator>Hilton, Douglas J.</creator><creator>Sutherland, Grant R.</creator><creator>Begley, C.Glenn</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19970501</creationdate><title>The gene for the human interleukin-11 receptor alpha chain locus is highly homologous to the murine gene and contains alternatively spliced first exons</title><author>Nandurkar, Harshal H. ; Robb, Lorraine ; Nicholl, Jillian K. ; Hilton, Douglas J. ; Sutherland, Grant R. ; Begley, C.Glenn</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c360t-aa7ba227bc22e192879f625d647313f025c7044a91c07ba0948aaae10f876a973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>Alternative Splicing</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Chromosome Mapping</topic><topic>Chromosomes, Human, Pair 9</topic><topic>Cytokine receptor</topic><topic>DNA</topic><topic>Exons</topic><topic>Gene structure</topic><topic>hIL-11Rα</topic><topic>Humans</topic><topic>Interleukin-11 receptor</topic><topic>Interleukin-11 Receptor alpha Subunit</topic><topic>Mice</topic><topic>Molecular Sequence Data</topic><topic>Promoter Regions, Genetic</topic><topic>Receptors, Interleukin - genetics</topic><topic>Receptors, Interleukin-11</topic><topic>Restriction Mapping</topic><topic>Transcription, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nandurkar, Harshal H.</creatorcontrib><creatorcontrib>Robb, Lorraine</creatorcontrib><creatorcontrib>Nicholl, Jillian K.</creatorcontrib><creatorcontrib>Hilton, Douglas J.</creatorcontrib><creatorcontrib>Sutherland, Grant R.</creatorcontrib><creatorcontrib>Begley, C.Glenn</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>The international journal of biochemistry & cell biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nandurkar, Harshal H.</au><au>Robb, Lorraine</au><au>Nicholl, Jillian K.</au><au>Hilton, Douglas J.</au><au>Sutherland, Grant R.</au><au>Begley, C.Glenn</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The gene for the human interleukin-11 receptor alpha chain locus is highly homologous to the murine gene and contains alternatively spliced first exons</atitle><jtitle>The international journal of biochemistry & cell biology</jtitle><addtitle>Int J Biochem Cell Biol</addtitle><date>1997-05-01</date><risdate>1997</risdate><volume>29</volume><issue>5</issue><spage>753</spage><epage>766</epage><pages>753-766</pages><issn>1357-2725</issn><eissn>1878-5875</eissn><abstract>The gene for the murine interleukin-11 receptor α chain (mIL-11Rα) contains two loci (1 and 2), of which locus 2 is restricted to only some mouse strains. Two alternatively spliced exons (1a and 1b) encode the 5′ untranslated region (5′UTR) of the murine locus 1. We have characterized the gene for the human interleukin-11 receptor α chain locus (hIL-11Rα), examined its expression by Northern analysis and determined its chromosomal location by fluorescence
in situ hybridization. The presence of exon(s) encoding the 5′UTR and mapping of transcription initiation sites was determined by reverse-transcriptase polymerase chain reaction and 5′ rapid amplification of cDNA ends (5′RACE) techniques. The human locus spanned 10 kilobasepairs (kb) and consisted of 14 exons. Two alternatively spliced first exons (1a and 1b) encoding the 5′UTR were identified and shared 76 and 73% nucleotide identity with murine exons 1a and 1b. Multiple transcription start sites were demonstrated for human exon 1a. The promoter regions of both human exons 1a and 1b did not display a canonical TATA box. A predominant 1.8 kb transcript for the hIL-11Rα was present in heart, brain, skeletal muscle, lymph nodes, thymus, appendix, pancreas and foetal liver. The hIL-11Rα gene was localized to chromosome 9p13. In summary, the hIL-11Rα gene was highly related to locus 1 of the murine gene and there was no evidence of a second hIL-11Rα locus.</abstract><cop>Netherlands</cop><pub>Elsevier Ltd</pub><pmid>9251243</pmid><doi>10.1016/S1357-2725(97)00011-3</doi><tpages>14</tpages></addata></record> |
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subjects | Alternative Splicing Animals Base Sequence Chromosome Mapping Chromosomes, Human, Pair 9 Cytokine receptor DNA Exons Gene structure hIL-11Rα Humans Interleukin-11 receptor Interleukin-11 Receptor alpha Subunit Mice Molecular Sequence Data Promoter Regions, Genetic Receptors, Interleukin - genetics Receptors, Interleukin-11 Restriction Mapping Transcription, Genetic |
title | The gene for the human interleukin-11 receptor alpha chain locus is highly homologous to the murine gene and contains alternatively spliced first exons |
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