Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards
A phylogenetic tree for major lineages of iguanian lizards is estimated from 1,488 aligned base positions (858 informative) of newly reported mitochondrial DNA sequences representing coding regions for eight tRNAs, ND2, and portions of ND1 and COI. Two well-supported groups are defined, the Acrodont...
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| Veröffentlicht in: | Journal of molecular evolution 1997-06, Vol.44 (6), p.660-674 |
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| container_title | Journal of molecular evolution |
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| creator | Macey, J R Larson, A Ananjeva, N B Papenfuss, T J |
| description | A phylogenetic tree for major lineages of iguanian lizards is estimated from 1,488 aligned base positions (858 informative) of newly reported mitochondrial DNA sequences representing coding regions for eight tRNAs, ND2, and portions of ND1 and COI. Two well-supported groups are defined, the Acrodonta and the Iguanidae (sensu lato). This phylogenetic hypothesis is used to investigate evolutionary shifts in mitochondrial gene order, origin for light-strand replication, and secondary structure of tRNACys. These three characters shift together on the branch leading to acrodont lizards. Plate tectonics and the fossil record indicate that these characters changed in the Jurassic. We propose that changes to the secondary structure of tRNACys may destroy function of the origin for light-strand replication which, in turn, may facilitate shifts in gene order. |
| doi_str_mv | 10.1007/pl00006190 |
| format | Article |
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Two well-supported groups are defined, the Acrodonta and the Iguanidae (sensu lato). This phylogenetic hypothesis is used to investigate evolutionary shifts in mitochondrial gene order, origin for light-strand replication, and secondary structure of tRNACys. These three characters shift together on the branch leading to acrodont lizards. Plate tectonics and the fossil record indicate that these characters changed in the Jurassic. We propose that changes to the secondary structure of tRNACys may destroy function of the origin for light-strand replication which, in turn, may facilitate shifts in gene order.</description><identifier>ISSN: 0022-2844</identifier><identifier>EISSN: 1432-1432</identifier><identifier>DOI: 10.1007/pl00006190</identifier><identifier>PMID: 9169559</identifier><language>eng</language><publisher>Germany: Springer Nature B.V</publisher><subject>Animals ; Base Sequence ; Deoxyribonucleic acid ; DNA ; DNA, Mitochondrial ; Evolution, Molecular ; Gene order ; Gene sequencing ; Genomes ; Iguanidae ; Jurassic ; Lizards ; Lizards - genetics ; Mitochondrial DNA ; Molecular Sequence Data ; Nucleotide sequence ; Phylogenetics ; Phylogeny ; Plate tectonics ; Protein structure ; Replication ; Replication origins ; Sceloporus occidentalis ; Secondary structure ; Sequence Alignment</subject><ispartof>Journal of molecular evolution, 1997-06, Vol.44 (6), p.660-674</ispartof><rights>Springer-Verlag New York Inc. 1997.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c407t-6a65a9001c76b21de9aee3ab3b425255249b07106a55f89d060ec05eaf7a00f13</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9169559$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Macey, J R</creatorcontrib><creatorcontrib>Larson, A</creatorcontrib><creatorcontrib>Ananjeva, N B</creatorcontrib><creatorcontrib>Papenfuss, T J</creatorcontrib><title>Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards</title><title>Journal of molecular evolution</title><addtitle>J Mol Evol</addtitle><description>A phylogenetic tree for major lineages of iguanian lizards is estimated from 1,488 aligned base positions (858 informative) of newly reported mitochondrial DNA sequences representing coding regions for eight tRNAs, ND2, and portions of ND1 and COI. 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We propose that changes to the secondary structure of tRNACys may destroy function of the origin for light-strand replication which, in turn, may facilitate shifts in gene order.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA, Mitochondrial</subject><subject>Evolution, Molecular</subject><subject>Gene order</subject><subject>Gene sequencing</subject><subject>Genomes</subject><subject>Iguanidae</subject><subject>Jurassic</subject><subject>Lizards</subject><subject>Lizards - genetics</subject><subject>Mitochondrial DNA</subject><subject>Molecular Sequence Data</subject><subject>Nucleotide sequence</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Plate tectonics</subject><subject>Protein structure</subject><subject>Replication</subject><subject>Replication origins</subject><subject>Sceloporus occidentalis</subject><subject>Secondary structure</subject><subject>Sequence Alignment</subject><issn>0022-2844</issn><issn>1432-1432</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqF0UFLHDEUB_BQFF21F-9CQOihMPqSSTLmWMRWYUEPeh7ezLzZzTKTbJOZQv30zbJrD700hySQH4-X92fsUsCNAKhutwPkZYSFT2whVCmL3XbEFgBSFvJOqVN2ltIGQFTalifsxApjtbYL5h5-hWGeXPAYf_O0dv2UuPN8WkciPuImRJ6mOLfTHHHgPWG-UOKhzyQDN4V2HXwXXX5dkQ8jcRyDX3G3mtE79Hxw7xi7dMGOexwSfT6c5-zt-8Pr_WOxfP7xdP9tWbQKqqkwaDTa3GlbmUaKjiwSldiUjZJaai2VbaASYFDr_s52YIBa0IR9hQC9KM_Zl33dbQw_Z0pTPbrU0jCgpzCnurKgjLTlf6EwIPKcIMPrf-AmzNHnT9RSgVZaGKOz-rpXbQwpRerrbXRjnmotoN7FVL8sP2LK-OpQcm5G6v7SQy7lH_3ZjVI</recordid><startdate>19970601</startdate><enddate>19970601</enddate><creator>Macey, J R</creator><creator>Larson, A</creator><creator>Ananjeva, N B</creator><creator>Papenfuss, T J</creator><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19970601</creationdate><title>Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards</title><author>Macey, J R ; Larson, A ; Ananjeva, N B ; Papenfuss, T J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c407t-6a65a9001c76b21de9aee3ab3b425255249b07106a55f89d060ec05eaf7a00f13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA, Mitochondrial</topic><topic>Evolution, Molecular</topic><topic>Gene order</topic><topic>Gene sequencing</topic><topic>Genomes</topic><topic>Iguanidae</topic><topic>Jurassic</topic><topic>Lizards</topic><topic>Lizards - 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| subjects | Animals Base Sequence Deoxyribonucleic acid DNA DNA, Mitochondrial Evolution, Molecular Gene order Gene sequencing Genomes Iguanidae Jurassic Lizards Lizards - genetics Mitochondrial DNA Molecular Sequence Data Nucleotide sequence Phylogenetics Phylogeny Plate tectonics Protein structure Replication Replication origins Sceloporus occidentalis Secondary structure Sequence Alignment |
| title | Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards |
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