Isolation and Characterization of a cDNA Encoding a Xenopus Immunoglobulin Binding Protein, BiP (Grp78)
We have isolated a full-length cDNA clone encoding a Xenopus laevis immunoglobulin binding protein (BiP; also called glucose-regulated protein or grp78). The BiP cDNA sequence includes an open reading frame of 1,965 bp encoding a 655 amino acid protein with an N-terminal hydrophobic leader sequence...
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Veröffentlicht in: | Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 1997-02, Vol.116 (2), p.227-234 |
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description | We have isolated a full-length cDNA clone encoding a Xenopus laevis immunoglobulin binding protein (BiP; also called glucose-regulated protein or grp78). The BiP cDNA sequence includes an open reading frame of 1,965 bp encoding a 655 amino acid protein with an N-terminal hydrophobic leader sequence and a C-terminal KDEL tetrapeptide which has been found in other lumenal proteins of the endoplasmic reticulum. The 3′untranslated region contains a polyadenylation and an adenylation control element (ACE) as well as a putative mRNA instability sequence. The Xenopus BiP amino acid sequence displayed high identity with BiP from other vertebrates including chicken (91.3%), rat (90.7%), and human (89.9%). Northern hybridization analysis demonstrated that BiP mRNA was present constitutively in the Xenopus A6 kidney epithelial cell line and that BiP mRNA levels could be enhanced by treatment of the cells with galactose-free media, 2-deoxyglucose, 2-deoxygalactose, glucosamine, tunicamycin, heat shock, dithiothreitol, and the calcium ionophore, A23187. Finally, while BiP mRNA was detected in all of the adult tissues examined, the relative level of BiP mRNA differed dramatically between organs. For example, relatively high levels of BiP mRNA were detected in liver with moderate levels in testis, ovary and heart and reduced levels in eye and muscle tissue. |
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The BiP cDNA sequence includes an open reading frame of 1,965 bp encoding a 655 amino acid protein with an N-terminal hydrophobic leader sequence and a C-terminal KDEL tetrapeptide which has been found in other lumenal proteins of the endoplasmic reticulum. The 3′untranslated region contains a polyadenylation and an adenylation control element (ACE) as well as a putative mRNA instability sequence. The Xenopus BiP amino acid sequence displayed high identity with BiP from other vertebrates including chicken (91.3%), rat (90.7%), and human (89.9%). Northern hybridization analysis demonstrated that BiP mRNA was present constitutively in the Xenopus A6 kidney epithelial cell line and that BiP mRNA levels could be enhanced by treatment of the cells with galactose-free media, 2-deoxyglucose, 2-deoxygalactose, glucosamine, tunicamycin, heat shock, dithiothreitol, and the calcium ionophore, A23187. Finally, while BiP mRNA was detected in all of the adult tissues examined, the relative level of BiP mRNA differed dramatically between organs. For example, relatively high levels of BiP mRNA were detected in liver with moderate levels in testis, ovary and heart and reduced levels in eye and muscle tissue.</description><identifier>ISSN: 1096-4959</identifier><identifier>ISSN: 0305-0491</identifier><identifier>EISSN: 1879-1107</identifier><identifier>DOI: 10.1016/S0305-0491(96)00219-2</identifier><identifier>PMID: 9159886</identifier><language>eng</language><publisher>England: Elsevier Inc</publisher><subject>Amino Acid Sequence ; Animals ; Base Sequence ; BiP ; Carrier Proteins - genetics ; chaperone ; Cloning, Molecular ; development ; DNA, Complementary - genetics ; DNA, Complementary - isolation & purification ; Female ; Freshwater ; gene expression ; glucose-regulated protein ; grp78 ; heat shock protein ; Heat-Shock Proteins ; Humans ; immunoglobulin binding protein ; Immunoglobulin Heavy Chains - metabolism ; Male ; Molecular Chaperones - genetics ; Molecular Sequence Data ; mRNA ; Open Reading Frames ; Rats ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Sequence Homology, Amino Acid ; Tissue Distribution ; Xenopus ; Xenopus laevis ; Xenopus laevis - genetics</subject><ispartof>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, 1997-02, Vol.116 (2), p.227-234</ispartof><rights>1997 Elsevier Science Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c438t-24a28d85e2edb777735eb1609a5983eacf81e5ba036b1d3e547059fe9a09a5023</citedby><cites>FETCH-LOGICAL-c438t-24a28d85e2edb777735eb1609a5983eacf81e5ba036b1d3e547059fe9a09a5023</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/S0305-0491(96)00219-2$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9159886$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Miskovic, Dragana</creatorcontrib><creatorcontrib>Salter-Cid, Luisa</creatorcontrib><creatorcontrib>Ohan, Nicholas</creatorcontrib><creatorcontrib>Flajnik, Martin</creatorcontrib><creatorcontrib>Heikkila, John J.</creatorcontrib><title>Isolation and Characterization of a cDNA Encoding a Xenopus Immunoglobulin Binding Protein, BiP (Grp78)</title><title>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology</title><addtitle>Comp Biochem Physiol B Biochem Mol Biol</addtitle><description>We have isolated a full-length cDNA clone encoding a Xenopus laevis immunoglobulin binding protein (BiP; also called glucose-regulated protein or grp78). The BiP cDNA sequence includes an open reading frame of 1,965 bp encoding a 655 amino acid protein with an N-terminal hydrophobic leader sequence and a C-terminal KDEL tetrapeptide which has been found in other lumenal proteins of the endoplasmic reticulum. The 3′untranslated region contains a polyadenylation and an adenylation control element (ACE) as well as a putative mRNA instability sequence. The Xenopus BiP amino acid sequence displayed high identity with BiP from other vertebrates including chicken (91.3%), rat (90.7%), and human (89.9%). Northern hybridization analysis demonstrated that BiP mRNA was present constitutively in the Xenopus A6 kidney epithelial cell line and that BiP mRNA levels could be enhanced by treatment of the cells with galactose-free media, 2-deoxyglucose, 2-deoxygalactose, glucosamine, tunicamycin, heat shock, dithiothreitol, and the calcium ionophore, A23187. Finally, while BiP mRNA was detected in all of the adult tissues examined, the relative level of BiP mRNA differed dramatically between organs. For example, relatively high levels of BiP mRNA were detected in liver with moderate levels in testis, ovary and heart and reduced levels in eye and muscle tissue.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>BiP</subject><subject>Carrier Proteins - genetics</subject><subject>chaperone</subject><subject>Cloning, Molecular</subject><subject>development</subject><subject>DNA, Complementary - genetics</subject><subject>DNA, Complementary - isolation & purification</subject><subject>Female</subject><subject>Freshwater</subject><subject>gene expression</subject><subject>glucose-regulated protein</subject><subject>grp78</subject><subject>heat shock protein</subject><subject>Heat-Shock Proteins</subject><subject>Humans</subject><subject>immunoglobulin binding protein</subject><subject>Immunoglobulin Heavy Chains - metabolism</subject><subject>Male</subject><subject>Molecular Chaperones - genetics</subject><subject>Molecular Sequence Data</subject><subject>mRNA</subject><subject>Open Reading Frames</subject><subject>Rats</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Tissue Distribution</subject><subject>Xenopus</subject><subject>Xenopus laevis</subject><subject>Xenopus laevis - genetics</subject><issn>1096-4959</issn><issn>0305-0491</issn><issn>1879-1107</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcFO3DAQhq2qFQXKIyDlVIFEYGzHiX2q6EJhJUSRAKk3y3EmW1eJvbUTJPr0JLurXvFlPDOf_Y_mJ-SYwjkFWl48AgeRQ6HoiSpPARhVOftA9qmsVE4pVB-nO6gyL5RQn8lBSn8AuKSc7pE9RYWSstwnq2UKnRlc8JnxTbb4baKxA0b3b1sMbWYye3V_mV17GxrnV1P-C31Yjylb9v3ow6oL9dg5n313fgM8xDCg82dT4SE7uYnrSp5-IZ9a0yU82sVD8vzj-mlxm9_9vFkuLu9yW3A55KwwTDZSIMOmrqbDBda0BGWmeTka20qKojbAy5o2HEVRgVAtKjMjwPgh-br9dx3D3xHToHuXLHad8RjGpCsFTBZUvQvOoowxOoFiC9oYUorY6nV0vYmvmoKendAbJ_TshFal3jih50mOdwJj3WPz_9Vu9VP_27aP0zpeHEadrENvsXER7aCb4N5ReANY65bB</recordid><startdate>19970201</startdate><enddate>19970201</enddate><creator>Miskovic, Dragana</creator><creator>Salter-Cid, Luisa</creator><creator>Ohan, Nicholas</creator><creator>Flajnik, Martin</creator><creator>Heikkila, John J.</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19970201</creationdate><title>Isolation and Characterization of a cDNA Encoding a Xenopus Immunoglobulin Binding Protein, BiP (Grp78)</title><author>Miskovic, Dragana ; Salter-Cid, Luisa ; Ohan, Nicholas ; Flajnik, Martin ; Heikkila, John J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c438t-24a28d85e2edb777735eb1609a5983eacf81e5ba036b1d3e547059fe9a09a5023</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>BiP</topic><topic>Carrier Proteins - genetics</topic><topic>chaperone</topic><topic>Cloning, Molecular</topic><topic>development</topic><topic>DNA, Complementary - genetics</topic><topic>DNA, Complementary - isolation & purification</topic><topic>Female</topic><topic>Freshwater</topic><topic>gene expression</topic><topic>glucose-regulated protein</topic><topic>grp78</topic><topic>heat shock protein</topic><topic>Heat-Shock Proteins</topic><topic>Humans</topic><topic>immunoglobulin binding protein</topic><topic>Immunoglobulin Heavy Chains - metabolism</topic><topic>Male</topic><topic>Molecular Chaperones - genetics</topic><topic>Molecular Sequence Data</topic><topic>mRNA</topic><topic>Open Reading Frames</topic><topic>Rats</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><topic>Sequence Homology, Amino Acid</topic><topic>Tissue Distribution</topic><topic>Xenopus</topic><topic>Xenopus laevis</topic><topic>Xenopus laevis - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Miskovic, Dragana</creatorcontrib><creatorcontrib>Salter-Cid, Luisa</creatorcontrib><creatorcontrib>Ohan, Nicholas</creatorcontrib><creatorcontrib>Flajnik, Martin</creatorcontrib><creatorcontrib>Heikkila, John J.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Miskovic, Dragana</au><au>Salter-Cid, Luisa</au><au>Ohan, Nicholas</au><au>Flajnik, Martin</au><au>Heikkila, John J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Isolation and Characterization of a cDNA Encoding a Xenopus Immunoglobulin Binding Protein, BiP (Grp78)</atitle><jtitle>Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology</jtitle><addtitle>Comp Biochem Physiol B Biochem Mol Biol</addtitle><date>1997-02-01</date><risdate>1997</risdate><volume>116</volume><issue>2</issue><spage>227</spage><epage>234</epage><pages>227-234</pages><issn>1096-4959</issn><issn>0305-0491</issn><eissn>1879-1107</eissn><abstract>We have isolated a full-length cDNA clone encoding a Xenopus laevis immunoglobulin binding protein (BiP; also called glucose-regulated protein or grp78). The BiP cDNA sequence includes an open reading frame of 1,965 bp encoding a 655 amino acid protein with an N-terminal hydrophobic leader sequence and a C-terminal KDEL tetrapeptide which has been found in other lumenal proteins of the endoplasmic reticulum. The 3′untranslated region contains a polyadenylation and an adenylation control element (ACE) as well as a putative mRNA instability sequence. The Xenopus BiP amino acid sequence displayed high identity with BiP from other vertebrates including chicken (91.3%), rat (90.7%), and human (89.9%). Northern hybridization analysis demonstrated that BiP mRNA was present constitutively in the Xenopus A6 kidney epithelial cell line and that BiP mRNA levels could be enhanced by treatment of the cells with galactose-free media, 2-deoxyglucose, 2-deoxygalactose, glucosamine, tunicamycin, heat shock, dithiothreitol, and the calcium ionophore, A23187. Finally, while BiP mRNA was detected in all of the adult tissues examined, the relative level of BiP mRNA differed dramatically between organs. For example, relatively high levels of BiP mRNA were detected in liver with moderate levels in testis, ovary and heart and reduced levels in eye and muscle tissue.</abstract><cop>England</cop><pub>Elsevier Inc</pub><pmid>9159886</pmid><doi>10.1016/S0305-0491(96)00219-2</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Animals Base Sequence BiP Carrier Proteins - genetics chaperone Cloning, Molecular development DNA, Complementary - genetics DNA, Complementary - isolation & purification Female Freshwater gene expression glucose-regulated protein grp78 heat shock protein Heat-Shock Proteins Humans immunoglobulin binding protein Immunoglobulin Heavy Chains - metabolism Male Molecular Chaperones - genetics Molecular Sequence Data mRNA Open Reading Frames Rats RNA, Messenger - genetics RNA, Messenger - metabolism Sequence Homology, Amino Acid Tissue Distribution Xenopus Xenopus laevis Xenopus laevis - genetics |
title | Isolation and Characterization of a cDNA Encoding a Xenopus Immunoglobulin Binding Protein, BiP (Grp78) |
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