Triplet Repeat Polymorphism in the Transmembrane Region of the MICA Gene: A Strong Association of Six GCT Repetitions with Behçet Disease

A member of a novel family of the human major histocompatibility complex (MHC) class I genes termed MIC (MHC class I chain-related genes), MICA, has been recently identified near the HLA-B gene on the short arm of human chromosome 6. The predicted amino acid sequence of the MICA chain suggests that...

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Veröffentlicht in:Proceedings of the National Academy of Sciences - PNAS 1997-02, Vol.94 (4), p.1298-1303
Hauptverfasser: Mizuki, Nobuhisa, Ota, Masao, Kimura, Minoru, Ohno, Shigeaki, Ando, Hitoshi, Katsuyama, Yoshihiko, Yamazaki, Masaaki, Watanabe, Koji, Goto, Kaori, Nakamura, Satoshi, Bahram, Seiamak, Inoko, Hidetoshi
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container_title Proceedings of the National Academy of Sciences - PNAS
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creator Mizuki, Nobuhisa
Ota, Masao
Kimura, Minoru
Ohno, Shigeaki
Ando, Hitoshi
Katsuyama, Yoshihiko
Yamazaki, Masaaki
Watanabe, Koji
Goto, Kaori
Nakamura, Satoshi
Bahram, Seiamak
Inoko, Hidetoshi
description A member of a novel family of the human major histocompatibility complex (MHC) class I genes termed MIC (MHC class I chain-related genes), MICA, has been recently identified near the HLA-B gene on the short arm of human chromosome 6. The predicted amino acid sequence of the MICA chain suggests that it folds similarly to typical class I chains and may have the capacity to bind peptides or other short ligands. Therefore, MICA is predicted to have a specialized function in antigen presentation or T cell recognition. During nucleotide sequence analyses of the MICA genomic clone, we found a triplet repeat microsatellite polymorphism of (GCT/AGC)n in the transmembrane (TM) region of the MICA gene. In 68 HLA homozygous B cell lines, 5 distinct alleles of this microsatellite sequence were detected. One of them contained an additional one base insertion that created a frameshift mutation resulting in a premature termination codon in the TM region. This particular allele may encode a soluble, secreted form of the MICA molecule. In addition, we have investigated this microsatellite polymorphism in 77 Japanese patients with Behcet disease, which is known to be associated with HLA-B51. The microsatellite allele consisting of 6 repetitions of GCT/AGC was present at significantly higher frequency in the patient group (Pc = 0.00055) than in a control population. Furthermore, the (GCT/AGC)6 allele was present in all B51 positive patients and in an additional 13 B51 negative patients. These results suggest the possibility of a primary association of Behcet disease with MICA rather than HLA-B.
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The microsatellite allele consisting of 6 repetitions of GCT/AGC was present at significantly higher frequency in the patient group (Pc = 0.00055) than in a control population. Furthermore, the (GCT/AGC)6 allele was present in all B51 positive patients and in an additional 13 B51 negative patients. 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Ota, Masao ; Kimura, Minoru ; Ohno, Shigeaki ; Ando, Hitoshi ; Katsuyama, Yoshihiko ; Yamazaki, Masaaki ; Watanabe, Koji ; Goto, Kaori ; Nakamura, Satoshi ; Bahram, Seiamak ; Inoko, Hidetoshi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c513t-bf3cff9943ae7506a373e4cab294068fc23d7f00b06ef75e9985c41d6f1e18d33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>Alleles</topic><topic>Asian People</topic><topic>B lymphocytes</topic><topic>B-Lymphocytes - immunology</topic><topic>Base Sequence</topic><topic>Behcet syndrome</topic><topic>Behcet Syndrome - etiology</topic><topic>Behcet Syndrome - genetics</topic><topic>Behcet Syndrome - immunology</topic><topic>Biological Sciences</topic><topic>Cell Line</topic><topic>Cell lines</topic><topic>Chi-Square Distribution</topic><topic>Chromosomes, Artificial, Yeast</topic><topic>Chromosomes, Human, Pair 6</topic><topic>Cosmids</topic><topic>Disease</topic><topic>DNA</topic><topic>Exons - genetics</topic><topic>Female</topic><topic>Genes</topic><topic>Genetics</topic><topic>Histocompatibility Antigens Class I - genetics</topic><topic>Histocompatibility Antigens Class I - immunology</topic><topic>HLA B antigens</topic><topic>HLA-B Antigens - genetics</topic><topic>HLA-B51 Antigen</topic><topic>Humans</topic><topic>Japan</topic><topic>Male</topic><topic>Membrane Proteins - genetics</topic><topic>Membrane Proteins - immunology</topic><topic>Mica</topic><topic>Microsatellites</topic><topic>Molecular Sequence Data</topic><topic>Phenotype</topic><topic>Polymerase chain reaction</topic><topic>Polymorphism, Genetic</topic><topic>Sequence Analysis, DNA</topic><topic>Trinucleotide Repeats - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mizuki, Nobuhisa</creatorcontrib><creatorcontrib>Ota, Masao</creatorcontrib><creatorcontrib>Kimura, Minoru</creatorcontrib><creatorcontrib>Ohno, Shigeaki</creatorcontrib><creatorcontrib>Ando, Hitoshi</creatorcontrib><creatorcontrib>Katsuyama, Yoshihiko</creatorcontrib><creatorcontrib>Yamazaki, Masaaki</creatorcontrib><creatorcontrib>Watanabe, Koji</creatorcontrib><creatorcontrib>Goto, Kaori</creatorcontrib><creatorcontrib>Nakamura, Satoshi</creatorcontrib><creatorcontrib>Bahram, Seiamak</creatorcontrib><creatorcontrib>Inoko, Hidetoshi</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium &amp; 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The microsatellite allele consisting of 6 repetitions of GCT/AGC was present at significantly higher frequency in the patient group (Pc = 0.00055) than in a control population. Furthermore, the (GCT/AGC)6 allele was present in all B51 positive patients and in an additional 13 B51 negative patients. These results suggest the possibility of a primary association of Behcet disease with MICA rather than HLA-B.</abstract><cop>United States</cop><pub>National Academy of Sciences of the United States of America</pub><pmid>9037047</pmid><doi>10.1073/pnas.94.4.1298</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record>
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subjects Alleles
Asian People
B lymphocytes
B-Lymphocytes - immunology
Base Sequence
Behcet syndrome
Behcet Syndrome - etiology
Behcet Syndrome - genetics
Behcet Syndrome - immunology
Biological Sciences
Cell Line
Cell lines
Chi-Square Distribution
Chromosomes, Artificial, Yeast
Chromosomes, Human, Pair 6
Cosmids
Disease
DNA
Exons - genetics
Female
Genes
Genetics
Histocompatibility Antigens Class I - genetics
Histocompatibility Antigens Class I - immunology
HLA B antigens
HLA-B Antigens - genetics
HLA-B51 Antigen
Humans
Japan
Male
Membrane Proteins - genetics
Membrane Proteins - immunology
Mica
Microsatellites
Molecular Sequence Data
Phenotype
Polymerase chain reaction
Polymorphism, Genetic
Sequence Analysis, DNA
Trinucleotide Repeats - genetics
title Triplet Repeat Polymorphism in the Transmembrane Region of the MICA Gene: A Strong Association of Six GCT Repetitions with Behçet Disease
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