Enhanced Ribosome Frameshifting in Stationary Phase Cells
We have examined the effect of growth phase in Escherichia colion the translation of a plasmid-borne lacZgene in which active enzyme synthesis requires a leftward frameshift. During the log phase of growth, the differential rate of enzyme synthesis is very low. It increases by about two orders of ma...
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Veröffentlicht in: | Journal of molecular biology 1996-10, Vol.263 (2), p.140-148 |
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creator | Barak, Zeev Gallant, Jonathan Lindsley, Dale Kwieciszewki, Bart Heidel, Dan |
description | We have examined the effect of growth phase in
Escherichia colion the translation of a plasmid-borne
lacZgene in which active enzyme synthesis requires a leftward frameshift. During the log phase of growth, the differential rate of enzyme synthesis is very low. It increases by about two orders of magnitude during the small amount of protein synthesis which occurs at the end of log phase and the early part of stationary phase. The increase is sufficient to increase the enzyme's specific activity in crude extracts to 30 times more than it would be if the log-phase differential rate continued unchanged. No such large increase is observed with a zero-frame
lacZ
+control gene on the same plasmid under the control of the same promoter; a significant but much smaller increase is observed with a zero-frame control containing an in-frame terminator triplet in the region of the required frameshift. Protein sequence analysis of the enzyme made from the frameshift reporter in stationary cells shows that the increased enzyme synthesis is due to frameshifting, and not due to termination and reinitiation. The frameshift occurs at or right after the sequence U UUC AAG, an intrinsically shifty site. |
doi_str_mv | 10.1006/jmbi.1996.0565 |
format | Article |
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Escherichia colion the translation of a plasmid-borne
lacZgene in which active enzyme synthesis requires a leftward frameshift. During the log phase of growth, the differential rate of enzyme synthesis is very low. It increases by about two orders of magnitude during the small amount of protein synthesis which occurs at the end of log phase and the early part of stationary phase. The increase is sufficient to increase the enzyme's specific activity in crude extracts to 30 times more than it would be if the log-phase differential rate continued unchanged. No such large increase is observed with a zero-frame
lacZ
+control gene on the same plasmid under the control of the same promoter; a significant but much smaller increase is observed with a zero-frame control containing an in-frame terminator triplet in the region of the required frameshift. Protein sequence analysis of the enzyme made from the frameshift reporter in stationary cells shows that the increased enzyme synthesis is due to frameshifting, and not due to termination and reinitiation. The frameshift occurs at or right after the sequence U UUC AAG, an intrinsically shifty site.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1006/jmbi.1996.0565</identifier><identifier>PMID: 8913297</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Amino Acid Sequence ; Base Sequence ; Escherichia coli ; Escherichia coli - genetics ; Escherichia coli - growth & development ; frameshifting ; Frameshifting, Ribosomal ; Gene Expression Regulation, Bacterial ; Lac Operon ; Molecular Sequence Data ; Plasmids - genetics ; ribosome ; Ribosomes - genetics ; stationary phase ; translation</subject><ispartof>Journal of molecular biology, 1996-10, Vol.263 (2), p.140-148</ispartof><rights>1996 Academic Press</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c370t-a4f23b6d8a4f54f720a791673b1b0db89cd60852b9846c061c36aa910f0decc93</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1006/jmbi.1996.0565$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8913297$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Barak, Zeev</creatorcontrib><creatorcontrib>Gallant, Jonathan</creatorcontrib><creatorcontrib>Lindsley, Dale</creatorcontrib><creatorcontrib>Kwieciszewki, Bart</creatorcontrib><creatorcontrib>Heidel, Dan</creatorcontrib><title>Enhanced Ribosome Frameshifting in Stationary Phase Cells</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>We have examined the effect of growth phase in
Escherichia colion the translation of a plasmid-borne
lacZgene in which active enzyme synthesis requires a leftward frameshift. During the log phase of growth, the differential rate of enzyme synthesis is very low. It increases by about two orders of magnitude during the small amount of protein synthesis which occurs at the end of log phase and the early part of stationary phase. The increase is sufficient to increase the enzyme's specific activity in crude extracts to 30 times more than it would be if the log-phase differential rate continued unchanged. No such large increase is observed with a zero-frame
lacZ
+control gene on the same plasmid under the control of the same promoter; a significant but much smaller increase is observed with a zero-frame control containing an in-frame terminator triplet in the region of the required frameshift. Protein sequence analysis of the enzyme made from the frameshift reporter in stationary cells shows that the increased enzyme synthesis is due to frameshifting, and not due to termination and reinitiation. The frameshift occurs at or right after the sequence U UUC AAG, an intrinsically shifty site.</description><subject>Amino Acid Sequence</subject><subject>Base Sequence</subject><subject>Escherichia coli</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - growth & development</subject><subject>frameshifting</subject><subject>Frameshifting, Ribosomal</subject><subject>Gene Expression Regulation, Bacterial</subject><subject>Lac Operon</subject><subject>Molecular Sequence Data</subject><subject>Plasmids - genetics</subject><subject>ribosome</subject><subject>Ribosomes - genetics</subject><subject>stationary phase</subject><subject>translation</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1996</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkM9LwzAUx4Moc06v3oSevLW-JG2aHGU4FQaKP84hSVOXsTYz6QT_e1M2vImn9-D7g_c-CF1iKDAAu1l32hVYCFZAxaojNMXARc4Z5cdoCkBITjhlp-gsxjUAVLTkEzThAlMi6ikSd_1K9cY22YvTPvrOZougOhtXrh1c_5G5Pnsd1OB8r8J39rxS0WZzu9nEc3TSqk20F4c5Q--Lu7f5Q758un-c3y5zQ2sYclW2hGrW8LRUZVsTULXArKYaa2g0F6ZhwCuiBS-ZAYYNZUoJDC001hhBZ-h637sN_nNn4yA7F026QPXW76KsU7hkvPzXiBkIToAlY7E3muBjDLaV2-C69J7EIEeocoQqR6hyhJoCV4fmne5s82s_UEw63-s2cfhyNshonB2pumDNIBvv_qr-ATufhOk</recordid><startdate>19961025</startdate><enddate>19961025</enddate><creator>Barak, Zeev</creator><creator>Gallant, Jonathan</creator><creator>Lindsley, Dale</creator><creator>Kwieciszewki, Bart</creator><creator>Heidel, Dan</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TM</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>19961025</creationdate><title>Enhanced Ribosome Frameshifting in Stationary Phase Cells</title><author>Barak, Zeev ; Gallant, Jonathan ; Lindsley, Dale ; Kwieciszewki, Bart ; Heidel, Dan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c370t-a4f23b6d8a4f54f720a791673b1b0db89cd60852b9846c061c36aa910f0decc93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1996</creationdate><topic>Amino Acid Sequence</topic><topic>Base Sequence</topic><topic>Escherichia coli</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - growth & development</topic><topic>frameshifting</topic><topic>Frameshifting, Ribosomal</topic><topic>Gene Expression Regulation, Bacterial</topic><topic>Lac Operon</topic><topic>Molecular Sequence Data</topic><topic>Plasmids - genetics</topic><topic>ribosome</topic><topic>Ribosomes - genetics</topic><topic>stationary phase</topic><topic>translation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Barak, Zeev</creatorcontrib><creatorcontrib>Gallant, Jonathan</creatorcontrib><creatorcontrib>Lindsley, Dale</creatorcontrib><creatorcontrib>Kwieciszewki, Bart</creatorcontrib><creatorcontrib>Heidel, Dan</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Nucleic Acids Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Barak, Zeev</au><au>Gallant, Jonathan</au><au>Lindsley, Dale</au><au>Kwieciszewki, Bart</au><au>Heidel, Dan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Enhanced Ribosome Frameshifting in Stationary Phase Cells</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>1996-10-25</date><risdate>1996</risdate><volume>263</volume><issue>2</issue><spage>140</spage><epage>148</epage><pages>140-148</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>We have examined the effect of growth phase in
Escherichia colion the translation of a plasmid-borne
lacZgene in which active enzyme synthesis requires a leftward frameshift. During the log phase of growth, the differential rate of enzyme synthesis is very low. It increases by about two orders of magnitude during the small amount of protein synthesis which occurs at the end of log phase and the early part of stationary phase. The increase is sufficient to increase the enzyme's specific activity in crude extracts to 30 times more than it would be if the log-phase differential rate continued unchanged. No such large increase is observed with a zero-frame
lacZ
+control gene on the same plasmid under the control of the same promoter; a significant but much smaller increase is observed with a zero-frame control containing an in-frame terminator triplet in the region of the required frameshift. Protein sequence analysis of the enzyme made from the frameshift reporter in stationary cells shows that the increased enzyme synthesis is due to frameshifting, and not due to termination and reinitiation. The frameshift occurs at or right after the sequence U UUC AAG, an intrinsically shifty site.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>8913297</pmid><doi>10.1006/jmbi.1996.0565</doi><tpages>9</tpages></addata></record> |
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source | MEDLINE; Elsevier ScienceDirect Journals Complete |
subjects | Amino Acid Sequence Base Sequence Escherichia coli Escherichia coli - genetics Escherichia coli - growth & development frameshifting Frameshifting, Ribosomal Gene Expression Regulation, Bacterial Lac Operon Molecular Sequence Data Plasmids - genetics ribosome Ribosomes - genetics stationary phase translation |
title | Enhanced Ribosome Frameshifting in Stationary Phase Cells |
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