The absence of ongoing immunoglobulin gene hypermutation suggests a distinct mechanism for c-myc mutation in endemic Burkitt's lymphoma
Burkitt's lymphoma is a malignancy of mature, immunoglobulin (Ig)-bearing B cells characterized by translocation between c-myc and Ig gene loci. A role for the juxtaposed Ig genes in the mutation and deregulation of c-myc expression typical of endemic Burkitt's lymphoma (eBL) has been prop...
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Veröffentlicht in: | Journal of pediatric hematology/oncology 1996-02, Vol.18 (1), p.29-35 |
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creator | COWLEY, C. G CARROLL, W. L JOHNSTON, J. M |
description | Burkitt's lymphoma is a malignancy of mature, immunoglobulin (Ig)-bearing B cells characterized by translocation between c-myc and Ig gene loci. A role for the juxtaposed Ig genes in the mutation and deregulation of c-myc expression typical of endemic Burkitt's lymphoma (eBL) has been proposed, but never proven. Our objective was to determine whether Ig gene hypermutation is ongoing in eBL.
We isolated Ig heavy-chain sequences from K962 eBL tumor cells using reverse transcription and polymerase chain reaction (PCR) amplification. The PCR product was ligated into Bluescript II vectors. Multiple subclones were sequenced and the variable regions were compared for evidence of ongoing Ig hypermutation.
Six total single base substitutions were observed within four of the nine subclones studied. Four substitutions resulted in amino acid changes and two were silent. There was no clustering of mutations in hypervariable regions, or a high incidence of amino acid replacement or link substitutions, all of which are characteristic of Ig hypermutation. The observed mutations occurred at a rate consistent with Taq polymerase error.
Our data indicate that in the eBL tumor sample K962, the mechanism underlying c-myc mutation is distinct from that which gives rise to Ig hypermutation. |
doi_str_mv | 10.1097/00043426-199602000-00006 |
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We isolated Ig heavy-chain sequences from K962 eBL tumor cells using reverse transcription and polymerase chain reaction (PCR) amplification. The PCR product was ligated into Bluescript II vectors. Multiple subclones were sequenced and the variable regions were compared for evidence of ongoing Ig hypermutation.
Six total single base substitutions were observed within four of the nine subclones studied. Four substitutions resulted in amino acid changes and two were silent. There was no clustering of mutations in hypervariable regions, or a high incidence of amino acid replacement or link substitutions, all of which are characteristic of Ig hypermutation. The observed mutations occurred at a rate consistent with Taq polymerase error.
Our data indicate that in the eBL tumor sample K962, the mechanism underlying c-myc mutation is distinct from that which gives rise to Ig hypermutation.</description><identifier>ISSN: 1077-4114</identifier><identifier>EISSN: 1536-3678</identifier><identifier>DOI: 10.1097/00043426-199602000-00006</identifier><identifier>PMID: 8556366</identifier><identifier>CODEN: JPHOFG</identifier><language>eng</language><publisher>Hagerstown, MD: Lippincott</publisher><subject>Base Sequence ; Biological and medical sciences ; Burkitt Lymphoma - genetics ; DNA Mutational Analysis ; DNA-Directed DNA Polymerase ; Genes, Immunoglobulin - genetics ; Genes, myc - genetics ; Hematologic and hematopoietic diseases ; Humans ; Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis ; Medical sciences ; Molecular Sequence Data ; Mutation ; Polymerase Chain Reaction ; RNA, Neoplasm - analysis ; RNA-Directed DNA Polymerase ; Taq Polymerase ; Tumor Cells, Cultured</subject><ispartof>Journal of pediatric hematology/oncology, 1996-02, Vol.18 (1), p.29-35</ispartof><rights>1996 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c339t-23782896104b2600598bba8a81bdab55b7021cf85f60d20f2933983e48904ff23</citedby><cites>FETCH-LOGICAL-c339t-23782896104b2600598bba8a81bdab55b7021cf85f60d20f2933983e48904ff23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=2983602$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8556366$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>COWLEY, C. G</creatorcontrib><creatorcontrib>CARROLL, W. L</creatorcontrib><creatorcontrib>JOHNSTON, J. M</creatorcontrib><title>The absence of ongoing immunoglobulin gene hypermutation suggests a distinct mechanism for c-myc mutation in endemic Burkitt's lymphoma</title><title>Journal of pediatric hematology/oncology</title><addtitle>J Pediatr Hematol Oncol</addtitle><description>Burkitt's lymphoma is a malignancy of mature, immunoglobulin (Ig)-bearing B cells characterized by translocation between c-myc and Ig gene loci. A role for the juxtaposed Ig genes in the mutation and deregulation of c-myc expression typical of endemic Burkitt's lymphoma (eBL) has been proposed, but never proven. Our objective was to determine whether Ig gene hypermutation is ongoing in eBL.
We isolated Ig heavy-chain sequences from K962 eBL tumor cells using reverse transcription and polymerase chain reaction (PCR) amplification. The PCR product was ligated into Bluescript II vectors. Multiple subclones were sequenced and the variable regions were compared for evidence of ongoing Ig hypermutation.
Six total single base substitutions were observed within four of the nine subclones studied. Four substitutions resulted in amino acid changes and two were silent. There was no clustering of mutations in hypervariable regions, or a high incidence of amino acid replacement or link substitutions, all of which are characteristic of Ig hypermutation. The observed mutations occurred at a rate consistent with Taq polymerase error.
Our data indicate that in the eBL tumor sample K962, the mechanism underlying c-myc mutation is distinct from that which gives rise to Ig hypermutation.</description><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Burkitt Lymphoma - genetics</subject><subject>DNA Mutational Analysis</subject><subject>DNA-Directed DNA Polymerase</subject><subject>Genes, Immunoglobulin - genetics</subject><subject>Genes, myc - genetics</subject><subject>Hematologic and hematopoietic diseases</subject><subject>Humans</subject><subject>Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis</subject><subject>Medical sciences</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Polymerase Chain Reaction</subject><subject>RNA, Neoplasm - analysis</subject><subject>RNA-Directed DNA Polymerase</subject><subject>Taq Polymerase</subject><subject>Tumor Cells, Cultured</subject><issn>1077-4114</issn><issn>1536-3678</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1996</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kc9u1DAQxq0KVMrCI1TyAdFTYGwn_nOEitJKlbiUc2Q7dtYQ24udHPYJeG0MXfYw8lgzv29G8yGECXwgoMRHAOhZT3lHlOJA27drAfwCXZGB8Y5xIV-0HIToekL6V-h1rT8AiGjUJbqUw8AZ51fo99PeYW2qS9bh7HFOcw5pxiHGLeV5yWZbQsKzSw7vjwdX4rbqNeSE6zbPrq4VazyFuoZkVxyd3esUasQ-F2y7eLT4DDQZlyYXg8Wft_IzrOtNxcsxHvY56jfopddLdW9P7w59v_vydHvfPX77-nD76bGzjKm1o0xIKhUn0BvKAQYljdFSS2ImbYbBCKDEejl4DhMFT1XDJHO9VNB7T9kOvX_WPZT8a2v7jzFU65ZFJ5e3OgqhJJHtTDsknxttybUW58dDCVGX40hg_OvB-N-D8ezB-M-Dhl6fZmwmuukMno7e6u9OdV2tXnzRyYZ6bqNt4abH_gBn_JBR</recordid><startdate>19960201</startdate><enddate>19960201</enddate><creator>COWLEY, C. G</creator><creator>CARROLL, W. L</creator><creator>JOHNSTON, J. M</creator><general>Lippincott</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19960201</creationdate><title>The absence of ongoing immunoglobulin gene hypermutation suggests a distinct mechanism for c-myc mutation in endemic Burkitt's lymphoma</title><author>COWLEY, C. G ; CARROLL, W. L ; JOHNSTON, J. M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c339t-23782896104b2600598bba8a81bdab55b7021cf85f60d20f2933983e48904ff23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1996</creationdate><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Burkitt Lymphoma - genetics</topic><topic>DNA Mutational Analysis</topic><topic>DNA-Directed DNA Polymerase</topic><topic>Genes, Immunoglobulin - genetics</topic><topic>Genes, myc - genetics</topic><topic>Hematologic and hematopoietic diseases</topic><topic>Humans</topic><topic>Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis</topic><topic>Medical sciences</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>Polymerase Chain Reaction</topic><topic>RNA, Neoplasm - analysis</topic><topic>RNA-Directed DNA Polymerase</topic><topic>Taq Polymerase</topic><topic>Tumor Cells, Cultured</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>COWLEY, C. G</creatorcontrib><creatorcontrib>CARROLL, W. L</creatorcontrib><creatorcontrib>JOHNSTON, J. M</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of pediatric hematology/oncology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>COWLEY, C. G</au><au>CARROLL, W. L</au><au>JOHNSTON, J. M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The absence of ongoing immunoglobulin gene hypermutation suggests a distinct mechanism for c-myc mutation in endemic Burkitt's lymphoma</atitle><jtitle>Journal of pediatric hematology/oncology</jtitle><addtitle>J Pediatr Hematol Oncol</addtitle><date>1996-02-01</date><risdate>1996</risdate><volume>18</volume><issue>1</issue><spage>29</spage><epage>35</epage><pages>29-35</pages><issn>1077-4114</issn><eissn>1536-3678</eissn><coden>JPHOFG</coden><abstract>Burkitt's lymphoma is a malignancy of mature, immunoglobulin (Ig)-bearing B cells characterized by translocation between c-myc and Ig gene loci. A role for the juxtaposed Ig genes in the mutation and deregulation of c-myc expression typical of endemic Burkitt's lymphoma (eBL) has been proposed, but never proven. Our objective was to determine whether Ig gene hypermutation is ongoing in eBL.
We isolated Ig heavy-chain sequences from K962 eBL tumor cells using reverse transcription and polymerase chain reaction (PCR) amplification. The PCR product was ligated into Bluescript II vectors. Multiple subclones were sequenced and the variable regions were compared for evidence of ongoing Ig hypermutation.
Six total single base substitutions were observed within four of the nine subclones studied. Four substitutions resulted in amino acid changes and two were silent. There was no clustering of mutations in hypervariable regions, or a high incidence of amino acid replacement or link substitutions, all of which are characteristic of Ig hypermutation. The observed mutations occurred at a rate consistent with Taq polymerase error.
Our data indicate that in the eBL tumor sample K962, the mechanism underlying c-myc mutation is distinct from that which gives rise to Ig hypermutation.</abstract><cop>Hagerstown, MD</cop><pub>Lippincott</pub><pmid>8556366</pmid><doi>10.1097/00043426-199602000-00006</doi><tpages>7</tpages></addata></record> |
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subjects | Base Sequence Biological and medical sciences Burkitt Lymphoma - genetics DNA Mutational Analysis DNA-Directed DNA Polymerase Genes, Immunoglobulin - genetics Genes, myc - genetics Hematologic and hematopoietic diseases Humans Leukemias. Malignant lymphomas. Malignant reticulosis. Myelofibrosis Medical sciences Molecular Sequence Data Mutation Polymerase Chain Reaction RNA, Neoplasm - analysis RNA-Directed DNA Polymerase Taq Polymerase Tumor Cells, Cultured |
title | The absence of ongoing immunoglobulin gene hypermutation suggests a distinct mechanism for c-myc mutation in endemic Burkitt's lymphoma |
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