Automated analysis of nuclear magnetic resonance assignments for proteins

Recent developments in protein NMR technology provide spectral data that are highly amenable to analysis by computer software systems. Automated methods of analysis use constraint satisfaction, pseudoenergy minimization, directed search, neural net, simulated annealing, and/or genetic algorithms to...

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Veröffentlicht in:Current opinion in structural biology 1995-10, Vol.5 (5), p.664-673
Hauptverfasser: Zimmerman, Diane E, Montelione, Gaetano T
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container_title Current opinion in structural biology
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Montelione, Gaetano T
description Recent developments in protein NMR technology provide spectral data that are highly amenable to analysis by computer software systems. Automated methods of analysis use constraint satisfaction, pseudoenergy minimization, directed search, neural net, simulated annealing, and/or genetic algorithms to establish sequential links and sequence-specific assignments. The most advanced systems provide automated analysis of complete backbone and extensive side-chain resonance assignments for proteins of 50–150 amino acids.
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source MEDLINE; Elsevier ScienceDirect Journals
subjects Amino Acid Sequence
Amino Acids - chemistry
Magnetic Resonance Spectroscopy - methods
Molecular Conformation
Protein Structure, Secondary
Protein Structure, Tertiary
Proteins - chemistry
Software
title Automated analysis of nuclear magnetic resonance assignments for proteins
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