The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs
Pseudomonas syringae pv. syringae 61 contains a 25-kb hrp cluster that is sufficient to elicit the hypersensitive response (HR) in nonhost plants. Previous studies have shown that mutations in complementation groups VIII, IX, and XI in the hrp cluster abolished the ability of the bacterium to cause...
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| Veröffentlicht in: | Molecular plant-microbe interactions 1995-09, Vol.8 (5), p.733-746 |
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| creator | Huang, H.C. (National Chung-Hsing University, Taichung, Taiwan.) Lin, R.H Chang, C.J Collmer, A Deng, W.L |
| description | Pseudomonas syringae pv. syringae 61 contains a 25-kb hrp cluster that is sufficient to elicit the hypersensitive response (HR) in nonhost plants. Previous studies have shown that mutations in complementation groups VIII, IX, and XI in the hrp cluster abolished the ability of the bacterium to cause the HR. The sequence of a 3.7-kb SmaI-SstI fragment covering groups VIII and IX now reveals five open reading frames (ORFs) in the same transcript, designated as hrpU, hrpW, hrpO, hrpX, and hrpY, and predicted to encode proteins of 14,795, 23,211, 9,381, 28,489, and 39,957 Da, respectively. The hrpU, hrpW, hrpO, hrpX, and hrpY genes are homologous and arranged colinearly with the yscQ/spa33/spaO, yscR/spa24/spaP, yscS/spa9/spaQ, yscT/spa29/spaR, and yscU/spa40/spaS genes of Yersinia spp., Shigella flexneri, and Salmonella typhimurium, respectively. These proteins also show similarity to Fli/Flh proteins of Bacillus and enteric bacteria. The Ysc and Spa proteins are involved in the secretion of virulence factors, like the Yop and Ipa proteins. Fli/Flh proteins are involved in flagellar biogenesis. The sequence of a 2.9-kb EcoRV-EcoRI DNA fragment containing mainly group XI revealed five ORFs, designated hrpC, hrpD, hrpE, hrpF, and hrpG, predicted to encode proteins of 29,096, 15,184, 21,525, 7,959, and 13,919 Da, respectively. The first three genes belong to an operon containing hrpZ, which encodes an extracellular protein that elicits the HR. hrpF and hrpG are two potential ORFs upstream of hrpH in the hrpH operon. HrpC is homologous to Yersinia YscJ, Pseudomonas solanacearum HrpI, Xanthomonas campestris pv. vesicatoria HrpB3, and Rhizobium fredii NolT. HrpE is similar to YscL of Yersinia spp P. s. pv. syringae 61 Hrp proteins are most similar to Ysc proteins among those homologs. TnphoA insertions in hrpC, hrpE, hrpW, hrpX, and hrpY abolished the ability of P. s. pv. syringae 61 to secrete HrpZ (harpinPss) |
| doi_str_mv | 10.1094/mpmi-8-0733 |
| format | Article |
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(National Chung-Hsing University, Taichung, Taiwan.) ; Lin, R.H ; Chang, C.J ; Collmer, A ; Deng, W.L</creator><creatorcontrib>Huang, H.C. (National Chung-Hsing University, Taichung, Taiwan.) ; Lin, R.H ; Chang, C.J ; Collmer, A ; Deng, W.L</creatorcontrib><description>Pseudomonas syringae pv. syringae 61 contains a 25-kb hrp cluster that is sufficient to elicit the hypersensitive response (HR) in nonhost plants. Previous studies have shown that mutations in complementation groups VIII, IX, and XI in the hrp cluster abolished the ability of the bacterium to cause the HR. The sequence of a 3.7-kb SmaI-SstI fragment covering groups VIII and IX now reveals five open reading frames (ORFs) in the same transcript, designated as hrpU, hrpW, hrpO, hrpX, and hrpY, and predicted to encode proteins of 14,795, 23,211, 9,381, 28,489, and 39,957 Da, respectively. The hrpU, hrpW, hrpO, hrpX, and hrpY genes are homologous and arranged colinearly with the yscQ/spa33/spaO, yscR/spa24/spaP, yscS/spa9/spaQ, yscT/spa29/spaR, and yscU/spa40/spaS genes of Yersinia spp., Shigella flexneri, and Salmonella typhimurium, respectively. These proteins also show similarity to Fli/Flh proteins of Bacillus and enteric bacteria. The Ysc and Spa proteins are involved in the secretion of virulence factors, like the Yop and Ipa proteins. Fli/Flh proteins are involved in flagellar biogenesis. The sequence of a 2.9-kb EcoRV-EcoRI DNA fragment containing mainly group XI revealed five ORFs, designated hrpC, hrpD, hrpE, hrpF, and hrpG, predicted to encode proteins of 29,096, 15,184, 21,525, 7,959, and 13,919 Da, respectively. The first three genes belong to an operon containing hrpZ, which encodes an extracellular protein that elicits the HR. hrpF and hrpG are two potential ORFs upstream of hrpH in the hrpH operon. HrpC is homologous to Yersinia YscJ, Pseudomonas solanacearum HrpI, Xanthomonas campestris pv. vesicatoria HrpB3, and Rhizobium fredii NolT. HrpE is similar to YscL of Yersinia spp P. s. pv. syringae 61 Hrp proteins are most similar to Ysc proteins among those homologs. TnphoA insertions in hrpC, hrpE, hrpW, hrpX, and hrpY abolished the ability of P. s. pv. syringae 61 to secrete HrpZ (harpinPss)</description><identifier>ISSN: 0894-0282</identifier><identifier>EISSN: 1943-7706</identifier><identifier>DOI: 10.1094/mpmi-8-0733</identifier><identifier>PMID: 7579617</identifier><identifier>CODEN: MPMIEL</identifier><language>eng</language><publisher>St Paul, MN: APS Press</publisher><subject>Amino Acid Sequence ; BACTERIA ; Bacterial Outer Membrane Proteins - genetics ; Bacterial Outer Membrane Proteins - secretion ; Bacterial plant pathogens ; Bacteriology ; Base Sequence ; Biological and medical sciences ; Cloning, Molecular ; COMPOSICION QUIMICA ; COMPOSITION CHIMIQUE ; DNA, Bacterial ; DNA-Directed RNA Polymerases - metabolism ; Escherichia coli - genetics ; Fundamental and applied biological sciences. Psychology ; GENE ; GENES ; Genes, Bacterial ; Genetics ; LOCI ; LOCUS ; Microbiology ; Molecular Sequence Data ; Multigene Family ; Phytopathology. Animal pests. Plant and forest protection ; PROTEINAS ; PROTEINE ; Pseudomonas - genetics ; PSEUDOMONAS SYRINGAE ; SECRECION ; SECRETION ; SECUENCIA NUCLEICA ; Sequence Homology, Amino Acid ; SEQUENCE NUCLEIQUE ; Systematics. Structure, properties and multiplication. Genetics ; Viral Proteins ; Yersinia - genetics</subject><ispartof>Molecular plant-microbe interactions, 1995-09, Vol.8 (5), p.733-746</ispartof><rights>1996 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=2903141$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/7579617$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Huang, H.C. (National Chung-Hsing University, Taichung, Taiwan.)</creatorcontrib><creatorcontrib>Lin, R.H</creatorcontrib><creatorcontrib>Chang, C.J</creatorcontrib><creatorcontrib>Collmer, A</creatorcontrib><creatorcontrib>Deng, W.L</creatorcontrib><title>The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs</title><title>Molecular plant-microbe interactions</title><addtitle>Mol Plant Microbe Interact</addtitle><description>Pseudomonas syringae pv. syringae 61 contains a 25-kb hrp cluster that is sufficient to elicit the hypersensitive response (HR) in nonhost plants. Previous studies have shown that mutations in complementation groups VIII, IX, and XI in the hrp cluster abolished the ability of the bacterium to cause the HR. The sequence of a 3.7-kb SmaI-SstI fragment covering groups VIII and IX now reveals five open reading frames (ORFs) in the same transcript, designated as hrpU, hrpW, hrpO, hrpX, and hrpY, and predicted to encode proteins of 14,795, 23,211, 9,381, 28,489, and 39,957 Da, respectively. The hrpU, hrpW, hrpO, hrpX, and hrpY genes are homologous and arranged colinearly with the yscQ/spa33/spaO, yscR/spa24/spaP, yscS/spa9/spaQ, yscT/spa29/spaR, and yscU/spa40/spaS genes of Yersinia spp., Shigella flexneri, and Salmonella typhimurium, respectively. These proteins also show similarity to Fli/Flh proteins of Bacillus and enteric bacteria. The Ysc and Spa proteins are involved in the secretion of virulence factors, like the Yop and Ipa proteins. Fli/Flh proteins are involved in flagellar biogenesis. The sequence of a 2.9-kb EcoRV-EcoRI DNA fragment containing mainly group XI revealed five ORFs, designated hrpC, hrpD, hrpE, hrpF, and hrpG, predicted to encode proteins of 29,096, 15,184, 21,525, 7,959, and 13,919 Da, respectively. The first three genes belong to an operon containing hrpZ, which encodes an extracellular protein that elicits the HR. hrpF and hrpG are two potential ORFs upstream of hrpH in the hrpH operon. HrpC is homologous to Yersinia YscJ, Pseudomonas solanacearum HrpI, Xanthomonas campestris pv. vesicatoria HrpB3, and Rhizobium fredii NolT. HrpE is similar to YscL of Yersinia spp P. s. pv. syringae 61 Hrp proteins are most similar to Ysc proteins among those homologs. TnphoA insertions in hrpC, hrpE, hrpW, hrpX, and hrpY abolished the ability of P. s. pv. syringae 61 to secrete HrpZ (harpinPss)</description><subject>Amino Acid Sequence</subject><subject>BACTERIA</subject><subject>Bacterial Outer Membrane Proteins - genetics</subject><subject>Bacterial Outer Membrane Proteins - secretion</subject><subject>Bacterial plant pathogens</subject><subject>Bacteriology</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Cloning, Molecular</subject><subject>COMPOSICION QUIMICA</subject><subject>COMPOSITION CHIMIQUE</subject><subject>DNA, Bacterial</subject><subject>DNA-Directed RNA Polymerases - metabolism</subject><subject>Escherichia coli - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>GENE</subject><subject>GENES</subject><subject>Genes, Bacterial</subject><subject>Genetics</subject><subject>LOCI</subject><subject>LOCUS</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Multigene Family</subject><subject>Phytopathology. Animal pests. Plant and forest protection</subject><subject>PROTEINAS</subject><subject>PROTEINE</subject><subject>Pseudomonas - genetics</subject><subject>PSEUDOMONAS SYRINGAE</subject><subject>SECRECION</subject><subject>SECRETION</subject><subject>SECUENCIA NUCLEICA</subject><subject>Sequence Homology, Amino Acid</subject><subject>SEQUENCE NUCLEIQUE</subject><subject>Systematics. Structure, properties and multiplication. Genetics</subject><subject>Viral Proteins</subject><subject>Yersinia - genetics</subject><issn>0894-0282</issn><issn>1943-7706</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1995</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpFkM1q3TAQRkVpSW_SrrorFLQo3TmRbOtvWULaFAINJFl0ZWR5ZKuVJUeyG-6z5eWikEu7EIP0nTmMBqEPlJxSotqzeZldJSsimuYV2lHVNpUQhL9GOyJVW5Fa1m_Rcc6_CaGKM3aEjgQTilOxQ4-3E2AT58XDCnhKCx4hlBe_5RUSjhZfZ9iGOMegM8775MKoAS9_T_9fOMUulI4BMl4fIu59NH_yc--zK-ME95tLMGAbE550Wly4zkUGJsHqYsDrpFesE5STdBgLaaJ3AXTye_zg1gn_gpRdcBrvs8FTmcbHMb9Db6z2Gd4f6gm6-3Zxe35ZXf38_uP861VlKVdr1YOWtQDOBiOFYHoAacASYZWQ1JphaDkRhNVSWdlbUoKeWdYSUE0jKJPNCfry4l1SvN8gr93ssgHvdYC45a5IeVtTXsBPB3DrZxi6JblZp3132HbJPx9ynY32tnzWuPwPqxVpaEsL9vEFszp2ekwFubtRjIu6OJ4AOCeasA</recordid><startdate>199509</startdate><enddate>199509</enddate><creator>Huang, H.C. (National Chung-Hsing University, Taichung, Taiwan.)</creator><creator>Lin, R.H</creator><creator>Chang, C.J</creator><creator>Collmer, A</creator><creator>Deng, W.L</creator><general>APS Press</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>199509</creationdate><title>The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs</title><author>Huang, H.C. (National Chung-Hsing University, Taichung, Taiwan.) ; Lin, R.H ; Chang, C.J ; Collmer, A ; Deng, W.L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-f169t-bea827e65dc8775ade8cef07f9781fcdd460705289f8bf007fb5f540e93371583</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1995</creationdate><topic>Amino Acid Sequence</topic><topic>BACTERIA</topic><topic>Bacterial Outer Membrane Proteins - genetics</topic><topic>Bacterial Outer Membrane Proteins - secretion</topic><topic>Bacterial plant pathogens</topic><topic>Bacteriology</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Cloning, Molecular</topic><topic>COMPOSICION QUIMICA</topic><topic>COMPOSITION CHIMIQUE</topic><topic>DNA, Bacterial</topic><topic>DNA-Directed RNA Polymerases - metabolism</topic><topic>Escherichia coli - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>GENE</topic><topic>GENES</topic><topic>Genes, Bacterial</topic><topic>Genetics</topic><topic>LOCI</topic><topic>LOCUS</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Multigene Family</topic><topic>Phytopathology. Animal pests. Plant and forest protection</topic><topic>PROTEINAS</topic><topic>PROTEINE</topic><topic>Pseudomonas - genetics</topic><topic>PSEUDOMONAS SYRINGAE</topic><topic>SECRECION</topic><topic>SECRETION</topic><topic>SECUENCIA NUCLEICA</topic><topic>Sequence Homology, Amino Acid</topic><topic>SEQUENCE NUCLEIQUE</topic><topic>Systematics. Structure, properties and multiplication. Genetics</topic><topic>Viral Proteins</topic><topic>Yersinia - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Huang, H.C. (National Chung-Hsing University, Taichung, Taiwan.)</creatorcontrib><creatorcontrib>Lin, R.H</creatorcontrib><creatorcontrib>Chang, C.J</creatorcontrib><creatorcontrib>Collmer, A</creatorcontrib><creatorcontrib>Deng, W.L</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular plant-microbe interactions</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Huang, H.C. (National Chung-Hsing University, Taichung, Taiwan.)</au><au>Lin, R.H</au><au>Chang, C.J</au><au>Collmer, A</au><au>Deng, W.L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs</atitle><jtitle>Molecular plant-microbe interactions</jtitle><addtitle>Mol Plant Microbe Interact</addtitle><date>1995-09</date><risdate>1995</risdate><volume>8</volume><issue>5</issue><spage>733</spage><epage>746</epage><pages>733-746</pages><issn>0894-0282</issn><eissn>1943-7706</eissn><coden>MPMIEL</coden><abstract>Pseudomonas syringae pv. syringae 61 contains a 25-kb hrp cluster that is sufficient to elicit the hypersensitive response (HR) in nonhost plants. Previous studies have shown that mutations in complementation groups VIII, IX, and XI in the hrp cluster abolished the ability of the bacterium to cause the HR. The sequence of a 3.7-kb SmaI-SstI fragment covering groups VIII and IX now reveals five open reading frames (ORFs) in the same transcript, designated as hrpU, hrpW, hrpO, hrpX, and hrpY, and predicted to encode proteins of 14,795, 23,211, 9,381, 28,489, and 39,957 Da, respectively. The hrpU, hrpW, hrpO, hrpX, and hrpY genes are homologous and arranged colinearly with the yscQ/spa33/spaO, yscR/spa24/spaP, yscS/spa9/spaQ, yscT/spa29/spaR, and yscU/spa40/spaS genes of Yersinia spp., Shigella flexneri, and Salmonella typhimurium, respectively. These proteins also show similarity to Fli/Flh proteins of Bacillus and enteric bacteria. The Ysc and Spa proteins are involved in the secretion of virulence factors, like the Yop and Ipa proteins. Fli/Flh proteins are involved in flagellar biogenesis. The sequence of a 2.9-kb EcoRV-EcoRI DNA fragment containing mainly group XI revealed five ORFs, designated hrpC, hrpD, hrpE, hrpF, and hrpG, predicted to encode proteins of 29,096, 15,184, 21,525, 7,959, and 13,919 Da, respectively. The first three genes belong to an operon containing hrpZ, which encodes an extracellular protein that elicits the HR. hrpF and hrpG are two potential ORFs upstream of hrpH in the hrpH operon. HrpC is homologous to Yersinia YscJ, Pseudomonas solanacearum HrpI, Xanthomonas campestris pv. vesicatoria HrpB3, and Rhizobium fredii NolT. HrpE is similar to YscL of Yersinia spp P. s. pv. syringae 61 Hrp proteins are most similar to Ysc proteins among those homologs. TnphoA insertions in hrpC, hrpE, hrpW, hrpX, and hrpY abolished the ability of P. s. pv. syringae 61 to secrete HrpZ (harpinPss)</abstract><cop>St Paul, MN</cop><pub>APS Press</pub><pmid>7579617</pmid><doi>10.1094/mpmi-8-0733</doi><tpages>14</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0894-0282 |
| ispartof | Molecular plant-microbe interactions, 1995-09, Vol.8 (5), p.733-746 |
| issn | 0894-0282 1943-7706 |
| language | eng |
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| source | MEDLINE; Alma/SFX Local Collection |
| subjects | Amino Acid Sequence BACTERIA Bacterial Outer Membrane Proteins - genetics Bacterial Outer Membrane Proteins - secretion Bacterial plant pathogens Bacteriology Base Sequence Biological and medical sciences Cloning, Molecular COMPOSICION QUIMICA COMPOSITION CHIMIQUE DNA, Bacterial DNA-Directed RNA Polymerases - metabolism Escherichia coli - genetics Fundamental and applied biological sciences. Psychology GENE GENES Genes, Bacterial Genetics LOCI LOCUS Microbiology Molecular Sequence Data Multigene Family Phytopathology. Animal pests. Plant and forest protection PROTEINAS PROTEINE Pseudomonas - genetics PSEUDOMONAS SYRINGAE SECRECION SECRETION SECUENCIA NUCLEICA Sequence Homology, Amino Acid SEQUENCE NUCLEIQUE Systematics. Structure, properties and multiplication. Genetics Viral Proteins Yersinia - genetics |
| title | The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs |
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