Cloning, expression, and nucleotide sequence of livR, the repressor for high-affinity branched-chain amino acid transport in Escherichia coli
The livR gene encoding the repressor for high‐affinity branched‐chain amino acid transport in Escherichia coli has been cloned from a library prepared from the episome F106. The inserted DNA fragment from the initial cloned plasmid, pANT1, complemented two independent, spontaneously derived, regulat...
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Veröffentlicht in: | Proteins, structure, function, and bioinformatics structure, function, and bioinformatics, 1986-02, Vol.1 (2), p.125-133 |
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description | The livR gene encoding the repressor for high‐affinity branched‐chain amino acid transport in Escherichia coli has been cloned from a library prepared from the episome F106. The inserted DNA fragment from the initial cloned plasmid, pANT1, complemented two independent, spontaneously derived, regulatory mutations. Subcloning as well as the creation of deletions with Bal31 exonuclease revealed that the entire regulatory region is contained within a 1.1‐kb RsaI‐SalI fragment. Expression of the pANT plasmids in E. coli minicells showed that the regulatory region encodes one detectable protein with an apparent molecular weight of 21,000. DNA sequencing revealed one open reading frame of 501 bp encoding a protein with a calculated MW of 19,155. The potential secondary structure of the regulatory protein has been predicted and it suggests that the carboxy terminus may fold into three consecutive alpha helices. These results suggests that the livR gene encodes a repressor which plays a role in the regulation of expression of the livJ and the livK transport genes. |
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The inserted DNA fragment from the initial cloned plasmid, pANT1, complemented two independent, spontaneously derived, regulatory mutations. Subcloning as well as the creation of deletions with Bal31 exonuclease revealed that the entire regulatory region is contained within a 1.1‐kb RsaI‐SalI fragment. Expression of the pANT plasmids in E. coli minicells showed that the regulatory region encodes one detectable protein with an apparent molecular weight of 21,000. DNA sequencing revealed one open reading frame of 501 bp encoding a protein with a calculated MW of 19,155. The potential secondary structure of the regulatory protein has been predicted and it suggests that the carboxy terminus may fold into three consecutive alpha helices. These results suggests that the livR gene encodes a repressor which plays a role in the regulation of expression of the livJ and the livK transport genes.</description><identifier>ISSN: 0887-3585</identifier><identifier>EISSN: 1097-0134</identifier><identifier>DOI: 10.1002/prot.340010204</identifier><identifier>PMID: 3329726</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>Amino Acid Sequence ; Amino Acids, Branched-Chain - metabolism ; Base Sequence ; Biological Transport, Active ; cell physiology ; Cloning, Molecular ; DNA, Bacterial - genetics ; Escherichia coli ; Escherichia coli - genetics ; Escherichia coli - metabolism ; Gene Expression Regulation ; Genes, Bacterial ; Genes, Regulator ; leucine uptake ; leucyl tRNA corepressor ; Molecular Sequence Data ; prokaryotic bacteria ; regulation ; Repressor Proteins - genetics ; Repressor Proteins - metabolism ; Transcription Factors - genetics</subject><ispartof>Proteins, structure, function, and bioinformatics, 1986-02, Vol.1 (2), p.125-133</ispartof><rights>Copyright © 1986 Alan R. Liss, Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3644-49422a5527b1b4cc662dd2a4eb8d8ab63a02a01615b3f42dd9d09d0c2a4490493</citedby><cites>FETCH-LOGICAL-c3644-49422a5527b1b4cc662dd2a4eb8d8ab63a02a01615b3f42dd9d09d0c2a4490493</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fprot.340010204$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fprot.340010204$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/3329726$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Antonucci, Tammy K.</creatorcontrib><creatorcontrib>Wagner, Lois M.</creatorcontrib><creatorcontrib>Oxender, Dale L.</creatorcontrib><title>Cloning, expression, and nucleotide sequence of livR, the repressor for high-affinity branched-chain amino acid transport in Escherichia coli</title><title>Proteins, structure, function, and bioinformatics</title><addtitle>Proteins</addtitle><description>The livR gene encoding the repressor for high‐affinity branched‐chain amino acid transport in Escherichia coli has been cloned from a library prepared from the episome F106. The inserted DNA fragment from the initial cloned plasmid, pANT1, complemented two independent, spontaneously derived, regulatory mutations. Subcloning as well as the creation of deletions with Bal31 exonuclease revealed that the entire regulatory region is contained within a 1.1‐kb RsaI‐SalI fragment. Expression of the pANT plasmids in E. coli minicells showed that the regulatory region encodes one detectable protein with an apparent molecular weight of 21,000. DNA sequencing revealed one open reading frame of 501 bp encoding a protein with a calculated MW of 19,155. The potential secondary structure of the regulatory protein has been predicted and it suggests that the carboxy terminus may fold into three consecutive alpha helices. These results suggests that the livR gene encodes a repressor which plays a role in the regulation of expression of the livJ and the livK transport genes.</description><subject>Amino Acid Sequence</subject><subject>Amino Acids, Branched-Chain - metabolism</subject><subject>Base Sequence</subject><subject>Biological Transport, Active</subject><subject>cell physiology</subject><subject>Cloning, Molecular</subject><subject>DNA, Bacterial - genetics</subject><subject>Escherichia coli</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - metabolism</subject><subject>Gene Expression Regulation</subject><subject>Genes, Bacterial</subject><subject>Genes, Regulator</subject><subject>leucine uptake</subject><subject>leucyl tRNA corepressor</subject><subject>Molecular Sequence Data</subject><subject>prokaryotic bacteria</subject><subject>regulation</subject><subject>Repressor Proteins - genetics</subject><subject>Repressor Proteins - metabolism</subject><subject>Transcription Factors - genetics</subject><issn>0887-3585</issn><issn>1097-0134</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1986</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUtvEzEUhS0EKqGwZYfkFatMuH6MPbNE6QNQRKEUsbQ8tqdjmNjBnkDzI_jPuCSK2FWyZcnnO0e69yD0ksCCANA3mxSnBeMABCjwR2hGoJUVEMYfoxk0jaxY3dRP0bOcvwOAaJk4QSeM0VZSMUN_lmMMPtzOsbvbJJezj2GOdbA4bM3o4uStw9n93LpgHI49Hv2v6zmeBoeT-2eICfflDv52qHTf--CnHe6SDmZwtjKD9gHrtQ8Ra-MtnoqSNzFNuPyf5wIlbwavsYmjf46e9HrM7sXhPUVfL85vlu-q1dXl--XbVWWY4LziLadU1zWVHem4MUJQa6nmrmtsozvBNFANRJC6Yz0vWmuhHFMQ3gJv2Sl6vc8t2yuj5UmtfTZuHHVwcZuVlKyuGyEeBAmXgpblF3CxB02KOSfXq03ya512ioC6L0rdF6WORRXDq0Pytls7e8QPzRS93eu__eh2D6SpT9dXN_9nV3uvz5O7O3p1-qGEZLJW3z5eKvbh4vOq-ULUGfsLer-wpA</recordid><startdate>198602</startdate><enddate>198602</enddate><creator>Antonucci, Tammy K.</creator><creator>Wagner, Lois M.</creator><creator>Oxender, Dale L.</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>198602</creationdate><title>Cloning, expression, and nucleotide sequence of livR, the repressor for high-affinity branched-chain amino acid transport in Escherichia coli</title><author>Antonucci, Tammy K. ; Wagner, Lois M. ; Oxender, Dale L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3644-49422a5527b1b4cc662dd2a4eb8d8ab63a02a01615b3f42dd9d09d0c2a4490493</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1986</creationdate><topic>Amino Acid Sequence</topic><topic>Amino Acids, Branched-Chain - metabolism</topic><topic>Base Sequence</topic><topic>Biological Transport, Active</topic><topic>cell physiology</topic><topic>Cloning, Molecular</topic><topic>DNA, Bacterial - genetics</topic><topic>Escherichia coli</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - metabolism</topic><topic>Gene Expression Regulation</topic><topic>Genes, Bacterial</topic><topic>Genes, Regulator</topic><topic>leucine uptake</topic><topic>leucyl tRNA corepressor</topic><topic>Molecular Sequence Data</topic><topic>prokaryotic bacteria</topic><topic>regulation</topic><topic>Repressor Proteins - genetics</topic><topic>Repressor Proteins - metabolism</topic><topic>Transcription Factors - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Antonucci, Tammy K.</creatorcontrib><creatorcontrib>Wagner, Lois M.</creatorcontrib><creatorcontrib>Oxender, Dale L.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Proteins, structure, function, and bioinformatics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Antonucci, Tammy K.</au><au>Wagner, Lois M.</au><au>Oxender, Dale L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning, expression, and nucleotide sequence of livR, the repressor for high-affinity branched-chain amino acid transport in Escherichia coli</atitle><jtitle>Proteins, structure, function, and bioinformatics</jtitle><addtitle>Proteins</addtitle><date>1986-02</date><risdate>1986</risdate><volume>1</volume><issue>2</issue><spage>125</spage><epage>133</epage><pages>125-133</pages><issn>0887-3585</issn><eissn>1097-0134</eissn><abstract>The livR gene encoding the repressor for high‐affinity branched‐chain amino acid transport in Escherichia coli has been cloned from a library prepared from the episome F106. The inserted DNA fragment from the initial cloned plasmid, pANT1, complemented two independent, spontaneously derived, regulatory mutations. Subcloning as well as the creation of deletions with Bal31 exonuclease revealed that the entire regulatory region is contained within a 1.1‐kb RsaI‐SalI fragment. Expression of the pANT plasmids in E. coli minicells showed that the regulatory region encodes one detectable protein with an apparent molecular weight of 21,000. DNA sequencing revealed one open reading frame of 501 bp encoding a protein with a calculated MW of 19,155. The potential secondary structure of the regulatory protein has been predicted and it suggests that the carboxy terminus may fold into three consecutive alpha helices. These results suggests that the livR gene encodes a repressor which plays a role in the regulation of expression of the livJ and the livK transport genes.</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>3329726</pmid><doi>10.1002/prot.340010204</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Amino Acids, Branched-Chain - metabolism Base Sequence Biological Transport, Active cell physiology Cloning, Molecular DNA, Bacterial - genetics Escherichia coli Escherichia coli - genetics Escherichia coli - metabolism Gene Expression Regulation Genes, Bacterial Genes, Regulator leucine uptake leucyl tRNA corepressor Molecular Sequence Data prokaryotic bacteria regulation Repressor Proteins - genetics Repressor Proteins - metabolism Transcription Factors - genetics |
title | Cloning, expression, and nucleotide sequence of livR, the repressor for high-affinity branched-chain amino acid transport in Escherichia coli |
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