A Reporter Gene to Analyse the Hypermutation of Immunoglobulin Genes
The affinity maturation of antibodies is driven by somatic hypermutation which is localized to specific segments of the coding genes. The information available on this process derives from studiedin vivo. With the intention of developing new approaches, we have constructed a fusion gene between a ka...
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Veröffentlicht in: | Journal of molecular biology 1995-06, Vol.249 (3), p.555-563 |
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description | The affinity maturation of antibodies is driven by somatic hypermutation which is localized to specific segments of the coding genes. The information available on this process derives from studiedin vivo. With the intention of developing new approaches, we have constructed a fusion gene between a kappa chain and a selectable neomycin resistance gene,neor. Theneorgen, which includes the SV40 small t intron and polyadenylation site, but not the upstream elements nor its first 12 amino acids, is an in-frame substitution of the FR2-CDR3 fragment of a rearranged VκOx1-Jκ5 gene. Expression ofneoractivity is therefore dependent on the upstream immunoglobulin sequence. A stop codon was placed in the CDR1 region so that only mutants survive treatment with geneticin sulphate (G418). The effectiveness of the system was tested by transfecting the NS0 myeloma cell line and isolating spontaneous mutants. Neomycin-resistant clones arose at an estimated rate of 1 × 10−8/cell division, and over 90% were authentic structural mutants. Unlike the somatic hypermutations, the majority arose by in-frame deletions including the stop codon, although up to 30% involved a point mutation. The reporter gene was then modified by substitution all the sequences downstream of the Jκ5 with others known to be required for full hypermutationin vivo. Different cell lines were transfected and H418-resistant clones analyzed. No significant increase in the rate of reversion or in the generation of point mutationsversusdeletions was detected, even using conditioned culture medium. In the presence of azacytidine however, a mutant involving multiple events (single base addition and deletion plus two point mutations) was detected. The reporter gene system therefore seems suitable to test culture conditions and modifications of the host cells aimed at the derivation of anin vitroassay of somatic hypermutation. |
doi_str_mv | 10.1006/jmbi.1995.0318 |
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The information available on this process derives from studiedin vivo. With the intention of developing new approaches, we have constructed a fusion gene between a kappa chain and a selectable neomycin resistance gene,neor. Theneorgen, which includes the SV40 small t intron and polyadenylation site, but not the upstream elements nor its first 12 amino acids, is an in-frame substitution of the FR2-CDR3 fragment of a rearranged VκOx1-Jκ5 gene. Expression ofneoractivity is therefore dependent on the upstream immunoglobulin sequence. A stop codon was placed in the CDR1 region so that only mutants survive treatment with geneticin sulphate (G418). The effectiveness of the system was tested by transfecting the NS0 myeloma cell line and isolating spontaneous mutants. Neomycin-resistant clones arose at an estimated rate of 1 × 10−8/cell division, and over 90% were authentic structural mutants. Unlike the somatic hypermutations, the majority arose by in-frame deletions including the stop codon, although up to 30% involved a point mutation. The reporter gene was then modified by substitution all the sequences downstream of the Jκ5 with others known to be required for full hypermutationin vivo. Different cell lines were transfected and H418-resistant clones analyzed. No significant increase in the rate of reversion or in the generation of point mutationsversusdeletions was detected, even using conditioned culture medium. In the presence of azacytidine however, a mutant involving multiple events (single base addition and deletion plus two point mutations) was detected. The reporter gene system therefore seems suitable to test culture conditions and modifications of the host cells aimed at the derivation of anin vitroassay of somatic hypermutation.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1006/jmbi.1995.0318</identifier><identifier>PMID: 7783211</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Amino Acid Sequence ; Animals ; B-Lymphocytes ; Base Sequence ; Cell Line ; Cloning, Molecular ; DNA Mutational Analysis ; DNA, Recombinant - genetics ; Drug Resistance, Microbial - genetics ; Gene Rearrangement, B-Lymphocyte, Light Chain ; Genes, Immunoglobulin ; Genes, Reporter ; Mice ; Molecular Sequence Data ; Mutation ; Neomycin - pharmacology ; Polymerase Chain Reaction ; somatic mutations ; spontaneous mutations ; stop-codon revertants ; tissue culture mutants ; Transfection</subject><ispartof>Journal of molecular biology, 1995-06, Vol.249 (3), p.555-563</ispartof><rights>1995 Academic Press</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c399t-c152c16b66ec5fcb5888381de66bc0cda961ec50bf3c8553cde4e7473ed472313</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S002228368570318X$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,65309</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/7783211$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chui, Yiu Loon</creatorcontrib><creatorcontrib>Lozano, Francisco</creatorcontrib><creatorcontrib>Jarvis, John M.</creatorcontrib><creatorcontrib>Pannell, Richard</creatorcontrib><creatorcontrib>Milstein, César</creatorcontrib><title>A Reporter Gene to Analyse the Hypermutation of Immunoglobulin Genes</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>The affinity maturation of antibodies is driven by somatic hypermutation which is localized to specific segments of the coding genes. The information available on this process derives from studiedin vivo. With the intention of developing new approaches, we have constructed a fusion gene between a kappa chain and a selectable neomycin resistance gene,neor. Theneorgen, which includes the SV40 small t intron and polyadenylation site, but not the upstream elements nor its first 12 amino acids, is an in-frame substitution of the FR2-CDR3 fragment of a rearranged VκOx1-Jκ5 gene. Expression ofneoractivity is therefore dependent on the upstream immunoglobulin sequence. A stop codon was placed in the CDR1 region so that only mutants survive treatment with geneticin sulphate (G418). The effectiveness of the system was tested by transfecting the NS0 myeloma cell line and isolating spontaneous mutants. Neomycin-resistant clones arose at an estimated rate of 1 × 10−8/cell division, and over 90% were authentic structural mutants. Unlike the somatic hypermutations, the majority arose by in-frame deletions including the stop codon, although up to 30% involved a point mutation. The reporter gene was then modified by substitution all the sequences downstream of the Jκ5 with others known to be required for full hypermutationin vivo. Different cell lines were transfected and H418-resistant clones analyzed. No significant increase in the rate of reversion or in the generation of point mutationsversusdeletions was detected, even using conditioned culture medium. In the presence of azacytidine however, a mutant involving multiple events (single base addition and deletion plus two point mutations) was detected. The reporter gene system therefore seems suitable to test culture conditions and modifications of the host cells aimed at the derivation of anin vitroassay of somatic hypermutation.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>B-Lymphocytes</subject><subject>Base Sequence</subject><subject>Cell Line</subject><subject>Cloning, Molecular</subject><subject>DNA Mutational Analysis</subject><subject>DNA, Recombinant - genetics</subject><subject>Drug Resistance, Microbial - genetics</subject><subject>Gene Rearrangement, B-Lymphocyte, Light Chain</subject><subject>Genes, Immunoglobulin</subject><subject>Genes, Reporter</subject><subject>Mice</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Neomycin - pharmacology</subject><subject>Polymerase Chain Reaction</subject><subject>somatic mutations</subject><subject>spontaneous mutations</subject><subject>stop-codon revertants</subject><subject>tissue culture mutants</subject><subject>Transfection</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1995</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkMFLwzAUxoMoc06v3oSevLXmNU2aHsfUTRgIoufQpq-a0TY1aYX997ZueBNP78H3fb_Dj5BroBFQKu52TWEiyDIeUQbyhMyByiyUgslTMqc0jsNYMnFOLrzfUUo5S-SMzNJUshhgTu6XwQt21vXogjW2GPQ2WLZ5vffj-4HBZt-ha4Y-741tA1sFT00ztPa9tsVQm_Zn4y_JWZXXHq-Od0HeHh9eV5tw-7x-Wi23oWZZ1ocaeKxBFEKg5pUuuJSSSShRiEJTXeaZgDGhRcW05JzpEhNMk5RhmaQxA7Ygtwdu5-zngL5XjfEa6zpv0Q5epSlLKIjs3yIIyWFiLkh0KGpnvXdYqc6ZJnd7BVRNftXkV01-1eR3HNwcyUPRYPlbPwodc3nIcfTwZdAprw22GkvjUPeqtOYv9DctVoky</recordid><startdate>19950609</startdate><enddate>19950609</enddate><creator>Chui, Yiu Loon</creator><creator>Lozano, Francisco</creator><creator>Jarvis, John M.</creator><creator>Pannell, Richard</creator><creator>Milstein, César</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T5</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19950609</creationdate><title>A Reporter Gene to Analyse the Hypermutation of Immunoglobulin Genes</title><author>Chui, Yiu Loon ; Lozano, Francisco ; Jarvis, John M. ; Pannell, Richard ; Milstein, César</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c399t-c152c16b66ec5fcb5888381de66bc0cda961ec50bf3c8553cde4e7473ed472313</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1995</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>B-Lymphocytes</topic><topic>Base Sequence</topic><topic>Cell Line</topic><topic>Cloning, Molecular</topic><topic>DNA Mutational Analysis</topic><topic>DNA, Recombinant - genetics</topic><topic>Drug Resistance, Microbial - genetics</topic><topic>Gene Rearrangement, B-Lymphocyte, Light Chain</topic><topic>Genes, Immunoglobulin</topic><topic>Genes, Reporter</topic><topic>Mice</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>Neomycin - pharmacology</topic><topic>Polymerase Chain Reaction</topic><topic>somatic mutations</topic><topic>spontaneous mutations</topic><topic>stop-codon revertants</topic><topic>tissue culture mutants</topic><topic>Transfection</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chui, Yiu Loon</creatorcontrib><creatorcontrib>Lozano, Francisco</creatorcontrib><creatorcontrib>Jarvis, John M.</creatorcontrib><creatorcontrib>Pannell, Richard</creatorcontrib><creatorcontrib>Milstein, César</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Immunology Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chui, Yiu Loon</au><au>Lozano, Francisco</au><au>Jarvis, John M.</au><au>Pannell, Richard</au><au>Milstein, César</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Reporter Gene to Analyse the Hypermutation of Immunoglobulin Genes</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>1995-06-09</date><risdate>1995</risdate><volume>249</volume><issue>3</issue><spage>555</spage><epage>563</epage><pages>555-563</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>The affinity maturation of antibodies is driven by somatic hypermutation which is localized to specific segments of the coding genes. The information available on this process derives from studiedin vivo. With the intention of developing new approaches, we have constructed a fusion gene between a kappa chain and a selectable neomycin resistance gene,neor. Theneorgen, which includes the SV40 small t intron and polyadenylation site, but not the upstream elements nor its first 12 amino acids, is an in-frame substitution of the FR2-CDR3 fragment of a rearranged VκOx1-Jκ5 gene. Expression ofneoractivity is therefore dependent on the upstream immunoglobulin sequence. A stop codon was placed in the CDR1 region so that only mutants survive treatment with geneticin sulphate (G418). The effectiveness of the system was tested by transfecting the NS0 myeloma cell line and isolating spontaneous mutants. Neomycin-resistant clones arose at an estimated rate of 1 × 10−8/cell division, and over 90% were authentic structural mutants. Unlike the somatic hypermutations, the majority arose by in-frame deletions including the stop codon, although up to 30% involved a point mutation. The reporter gene was then modified by substitution all the sequences downstream of the Jκ5 with others known to be required for full hypermutationin vivo. Different cell lines were transfected and H418-resistant clones analyzed. No significant increase in the rate of reversion or in the generation of point mutationsversusdeletions was detected, even using conditioned culture medium. In the presence of azacytidine however, a mutant involving multiple events (single base addition and deletion plus two point mutations) was detected. The reporter gene system therefore seems suitable to test culture conditions and modifications of the host cells aimed at the derivation of anin vitroassay of somatic hypermutation.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>7783211</pmid><doi>10.1006/jmbi.1995.0318</doi><tpages>9</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals B-Lymphocytes Base Sequence Cell Line Cloning, Molecular DNA Mutational Analysis DNA, Recombinant - genetics Drug Resistance, Microbial - genetics Gene Rearrangement, B-Lymphocyte, Light Chain Genes, Immunoglobulin Genes, Reporter Mice Molecular Sequence Data Mutation Neomycin - pharmacology Polymerase Chain Reaction somatic mutations spontaneous mutations stop-codon revertants tissue culture mutants Transfection |
title | A Reporter Gene to Analyse the Hypermutation of Immunoglobulin Genes |
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