Nitric Oxide Reductase Cytochrome P-450 Gene, CYP 55, of the Fungus Fusarium oxysporum Containing a Potential Binding-Site for FNR, the Transcription Factor Involved in the Regulation of Anaerobic Growth of Escherichia coli

A unique cytochrome P-450 (P-450) is involved in fungal denitrification, acting as a nitric oxide reductase. The phylogenetic classification of the P-450 (P-450nor) into the group of bacterial P-450s along with its involvement in the anaerobic process are of evolutional interest. The corresponding g...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of biochemistry (Tokyo) 1994-07, Vol.116 (1), p.88-94
Hauptverfasser: Tomura, Daisuke, Obika, enji, Fukamizu, kiyoshi, Shoun, irofumi
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 94
container_issue 1
container_start_page 88
container_title Journal of biochemistry (Tokyo)
container_volume 116
creator Tomura, Daisuke
Obika, enji
Fukamizu, kiyoshi
Shoun, irofumi
description A unique cytochrome P-450 (P-450) is involved in fungal denitrification, acting as a nitric oxide reductase. The phylogenetic classification of the P-450 (P-450nor) into the group of bacterial P-450s along with its involvement in the anaerobic process are of evolutional interest. The corresponding gene, CYP 55, of the fungus Fusarium oxysporum was isolated and sequenced. The P-450nor gene contained 7 introns that consisted of 49 to 55 bp. The presence of the introns suggested that horizontal transfer of the gene from bacteria to the fungus, if it had occurred, was an early event in evolution. Besides a TATA box, several inverted repeats were found in the 5′-upstream flanking region. One inverted repeat exhibited the same sequence as the binding site of FNR (fumarate and nitrate reduction), a DNA-binding, O2 (dioxygen)-sensor protein that positively regulates expressions of many hypoxic genes in Escherichia coli and other bacteria. The result suggested that the expression of P450nor is regulated in response to oxygen tension by an FNR-like system. Northern blot analyses showed that both nitrate and nitrite are the actual inducers of P-450nor and that its expression is predominantly regulated at the transcriptional level. These results raise the interesting possibility that the expression of the fungal denitrification system is regulated, as in the case of bacterial nitrate respiration, by a set of mechanisms, i.e., a combination of an FNR-like system and a system responding to nitrate/ nitrite.
doi_str_mv 10.1093/oxfordjournals.jbchem.a124508
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_76904068</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>76904068</sourcerecordid><originalsourceid>FETCH-LOGICAL-i348t-e35651152cfae07ecf3a56fc2dd1dfbc9b65558ab4ed61a987e60be841becc8e3</originalsourceid><addsrcrecordid>eNqFkc1y0zAUhb2AKaXwCMzcDazi1LIt_yzbtEk700kzpgyFjUeWrmMFWwqSXJKn7augphm2rO7P-ebM0VUQfCbRlERlcq53rTZio0ejWG-nm4Z3OEwZiVMaFW-C0yiKSVjG6eO74L21m5cxTpKT4CTPy4KU5DR4XkpnJIf7nRQIFYqRO2YRZnuneWf0gLAKvRssUOEEZj9WQOkEdAuuQ5iPaj1aXywzchxA7_Z2q43vZlo5JpVUa2Cw0g6Vk6yHS6mE34VfpUPw2WG-rCYHqwfDlOVGbp3UCuaMO6_eqifdP6EAqQ5QheuxZwfCJ7hQDI1ufPqF0X9c97K7tv4E_kGdZMB1Lz8Eb1t_Gvx4rGfBt_n1w-wmvLtf3M4u7kKZpIULMaEZJYTGvGUY5cjbhNGs5bEQRLQNL5uMUlqwJkWREVYWOWZRg0VKGuS8wOQs-PLquzX694jW1YO0HPueKdSjrfOsjNIoK_4LEs-UcUw9-OkIjs2Aot4aOTCzr49f5_XwVZfW4e6fzMyvOsuTnNY3jz_ralldXZZ5XH9P_gL1KrL1</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>16839225</pqid></control><display><type>article</type><title>Nitric Oxide Reductase Cytochrome P-450 Gene, CYP 55, of the Fungus Fusarium oxysporum Containing a Potential Binding-Site for FNR, the Transcription Factor Involved in the Regulation of Anaerobic Growth of Escherichia coli</title><source>J-STAGE Free</source><source>MEDLINE</source><source>Free Full-Text Journals in Chemistry</source><source>Oxford University Press Journals Digital Archive Legacy</source><creator>Tomura, Daisuke ; Obika, enji ; Fukamizu, kiyoshi ; Shoun, irofumi</creator><creatorcontrib>Tomura, Daisuke ; Obika, enji ; Fukamizu, kiyoshi ; Shoun, irofumi</creatorcontrib><description>A unique cytochrome P-450 (P-450) is involved in fungal denitrification, acting as a nitric oxide reductase. The phylogenetic classification of the P-450 (P-450nor) into the group of bacterial P-450s along with its involvement in the anaerobic process are of evolutional interest. The corresponding gene, CYP 55, of the fungus Fusarium oxysporum was isolated and sequenced. The P-450nor gene contained 7 introns that consisted of 49 to 55 bp. The presence of the introns suggested that horizontal transfer of the gene from bacteria to the fungus, if it had occurred, was an early event in evolution. Besides a TATA box, several inverted repeats were found in the 5′-upstream flanking region. One inverted repeat exhibited the same sequence as the binding site of FNR (fumarate and nitrate reduction), a DNA-binding, O2 (dioxygen)-sensor protein that positively regulates expressions of many hypoxic genes in Escherichia coli and other bacteria. The result suggested that the expression of P450nor is regulated in response to oxygen tension by an FNR-like system. Northern blot analyses showed that both nitrate and nitrite are the actual inducers of P-450nor and that its expression is predominantly regulated at the transcriptional level. These results raise the interesting possibility that the expression of the fungal denitrification system is regulated, as in the case of bacterial nitrate respiration, by a set of mechanisms, i.e., a combination of an FNR-like system and a system responding to nitrate/ nitrite.</description><identifier>ISSN: 0021-924X</identifier><identifier>DOI: 10.1093/oxfordjournals.jbchem.a124508</identifier><identifier>PMID: 7798191</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Amino Acid Sequence ; Anaerobiosis ; Bacterial Proteins - metabolism ; Base Sequence ; Binding Sites ; Blotting, Northern ; cytochrome P-450 ; Cytochrome P-450 Enzyme System - genetics ; denitrification ; Escherichia coli ; Escherichia coli - growth &amp; development ; Escherichia coli Proteins ; Fusarium - genetics ; Fusarium oxysporum ; Genes, Fungal ; Iron-Sulfur Proteins ; Molecular Sequence Data ; nitric oxide reductase ; Oxidoreductases - genetics ; Sequence Homology, Nucleic Acid ; Transcription Factors - metabolism ; Transcription, Genetic</subject><ispartof>Journal of biochemistry (Tokyo), 1994-07, Vol.116 (1), p.88-94</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/7798191$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tomura, Daisuke</creatorcontrib><creatorcontrib>Obika, enji</creatorcontrib><creatorcontrib>Fukamizu, kiyoshi</creatorcontrib><creatorcontrib>Shoun, irofumi</creatorcontrib><title>Nitric Oxide Reductase Cytochrome P-450 Gene, CYP 55, of the Fungus Fusarium oxysporum Containing a Potential Binding-Site for FNR, the Transcription Factor Involved in the Regulation of Anaerobic Growth of Escherichia coli</title><title>Journal of biochemistry (Tokyo)</title><addtitle>J Biochem</addtitle><description>A unique cytochrome P-450 (P-450) is involved in fungal denitrification, acting as a nitric oxide reductase. The phylogenetic classification of the P-450 (P-450nor) into the group of bacterial P-450s along with its involvement in the anaerobic process are of evolutional interest. The corresponding gene, CYP 55, of the fungus Fusarium oxysporum was isolated and sequenced. The P-450nor gene contained 7 introns that consisted of 49 to 55 bp. The presence of the introns suggested that horizontal transfer of the gene from bacteria to the fungus, if it had occurred, was an early event in evolution. Besides a TATA box, several inverted repeats were found in the 5′-upstream flanking region. One inverted repeat exhibited the same sequence as the binding site of FNR (fumarate and nitrate reduction), a DNA-binding, O2 (dioxygen)-sensor protein that positively regulates expressions of many hypoxic genes in Escherichia coli and other bacteria. The result suggested that the expression of P450nor is regulated in response to oxygen tension by an FNR-like system. Northern blot analyses showed that both nitrate and nitrite are the actual inducers of P-450nor and that its expression is predominantly regulated at the transcriptional level. These results raise the interesting possibility that the expression of the fungal denitrification system is regulated, as in the case of bacterial nitrate respiration, by a set of mechanisms, i.e., a combination of an FNR-like system and a system responding to nitrate/ nitrite.</description><subject>Amino Acid Sequence</subject><subject>Anaerobiosis</subject><subject>Bacterial Proteins - metabolism</subject><subject>Base Sequence</subject><subject>Binding Sites</subject><subject>Blotting, Northern</subject><subject>cytochrome P-450</subject><subject>Cytochrome P-450 Enzyme System - genetics</subject><subject>denitrification</subject><subject>Escherichia coli</subject><subject>Escherichia coli - growth &amp; development</subject><subject>Escherichia coli Proteins</subject><subject>Fusarium - genetics</subject><subject>Fusarium oxysporum</subject><subject>Genes, Fungal</subject><subject>Iron-Sulfur Proteins</subject><subject>Molecular Sequence Data</subject><subject>nitric oxide reductase</subject><subject>Oxidoreductases - genetics</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Transcription Factors - metabolism</subject><subject>Transcription, Genetic</subject><issn>0021-924X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1994</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1y0zAUhb2AKaXwCMzcDazi1LIt_yzbtEk700kzpgyFjUeWrmMFWwqSXJKn7augphm2rO7P-ebM0VUQfCbRlERlcq53rTZio0ejWG-nm4Z3OEwZiVMaFW-C0yiKSVjG6eO74L21m5cxTpKT4CTPy4KU5DR4XkpnJIf7nRQIFYqRO2YRZnuneWf0gLAKvRssUOEEZj9WQOkEdAuuQ5iPaj1aXywzchxA7_Z2q43vZlo5JpVUa2Cw0g6Vk6yHS6mE34VfpUPw2WG-rCYHqwfDlOVGbp3UCuaMO6_eqifdP6EAqQ5QheuxZwfCJ7hQDI1ufPqF0X9c97K7tv4E_kGdZMB1Lz8Eb1t_Gvx4rGfBt_n1w-wmvLtf3M4u7kKZpIULMaEZJYTGvGUY5cjbhNGs5bEQRLQNL5uMUlqwJkWREVYWOWZRg0VKGuS8wOQs-PLquzX694jW1YO0HPueKdSjrfOsjNIoK_4LEs-UcUw9-OkIjs2Aot4aOTCzr49f5_XwVZfW4e6fzMyvOsuTnNY3jz_ralldXZZ5XH9P_gL1KrL1</recordid><startdate>19940701</startdate><enddate>19940701</enddate><creator>Tomura, Daisuke</creator><creator>Obika, enji</creator><creator>Fukamizu, kiyoshi</creator><creator>Shoun, irofumi</creator><general>Oxford University Press</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7TM</scope><scope>M7N</scope><scope>7X8</scope></search><sort><creationdate>19940701</creationdate><title>Nitric Oxide Reductase Cytochrome P-450 Gene, CYP 55, of the Fungus Fusarium oxysporum Containing a Potential Binding-Site for FNR, the Transcription Factor Involved in the Regulation of Anaerobic Growth of Escherichia coli</title><author>Tomura, Daisuke ; Obika, enji ; Fukamizu, kiyoshi ; Shoun, irofumi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-i348t-e35651152cfae07ecf3a56fc2dd1dfbc9b65558ab4ed61a987e60be841becc8e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1994</creationdate><topic>Amino Acid Sequence</topic><topic>Anaerobiosis</topic><topic>Bacterial Proteins - metabolism</topic><topic>Base Sequence</topic><topic>Binding Sites</topic><topic>Blotting, Northern</topic><topic>cytochrome P-450</topic><topic>Cytochrome P-450 Enzyme System - genetics</topic><topic>denitrification</topic><topic>Escherichia coli</topic><topic>Escherichia coli - growth &amp; development</topic><topic>Escherichia coli Proteins</topic><topic>Fusarium - genetics</topic><topic>Fusarium oxysporum</topic><topic>Genes, Fungal</topic><topic>Iron-Sulfur Proteins</topic><topic>Molecular Sequence Data</topic><topic>nitric oxide reductase</topic><topic>Oxidoreductases - genetics</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Transcription Factors - metabolism</topic><topic>Transcription, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tomura, Daisuke</creatorcontrib><creatorcontrib>Obika, enji</creatorcontrib><creatorcontrib>Fukamizu, kiyoshi</creatorcontrib><creatorcontrib>Shoun, irofumi</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>Nucleic Acids Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of biochemistry (Tokyo)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tomura, Daisuke</au><au>Obika, enji</au><au>Fukamizu, kiyoshi</au><au>Shoun, irofumi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Nitric Oxide Reductase Cytochrome P-450 Gene, CYP 55, of the Fungus Fusarium oxysporum Containing a Potential Binding-Site for FNR, the Transcription Factor Involved in the Regulation of Anaerobic Growth of Escherichia coli</atitle><jtitle>Journal of biochemistry (Tokyo)</jtitle><addtitle>J Biochem</addtitle><date>1994-07-01</date><risdate>1994</risdate><volume>116</volume><issue>1</issue><spage>88</spage><epage>94</epage><pages>88-94</pages><issn>0021-924X</issn><abstract>A unique cytochrome P-450 (P-450) is involved in fungal denitrification, acting as a nitric oxide reductase. The phylogenetic classification of the P-450 (P-450nor) into the group of bacterial P-450s along with its involvement in the anaerobic process are of evolutional interest. The corresponding gene, CYP 55, of the fungus Fusarium oxysporum was isolated and sequenced. The P-450nor gene contained 7 introns that consisted of 49 to 55 bp. The presence of the introns suggested that horizontal transfer of the gene from bacteria to the fungus, if it had occurred, was an early event in evolution. Besides a TATA box, several inverted repeats were found in the 5′-upstream flanking region. One inverted repeat exhibited the same sequence as the binding site of FNR (fumarate and nitrate reduction), a DNA-binding, O2 (dioxygen)-sensor protein that positively regulates expressions of many hypoxic genes in Escherichia coli and other bacteria. The result suggested that the expression of P450nor is regulated in response to oxygen tension by an FNR-like system. Northern blot analyses showed that both nitrate and nitrite are the actual inducers of P-450nor and that its expression is predominantly regulated at the transcriptional level. These results raise the interesting possibility that the expression of the fungal denitrification system is regulated, as in the case of bacterial nitrate respiration, by a set of mechanisms, i.e., a combination of an FNR-like system and a system responding to nitrate/ nitrite.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>7798191</pmid><doi>10.1093/oxfordjournals.jbchem.a124508</doi><tpages>7</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0021-924X
ispartof Journal of biochemistry (Tokyo), 1994-07, Vol.116 (1), p.88-94
issn 0021-924X
language eng
recordid cdi_proquest_miscellaneous_76904068
source J-STAGE Free; MEDLINE; Free Full-Text Journals in Chemistry; Oxford University Press Journals Digital Archive Legacy
subjects Amino Acid Sequence
Anaerobiosis
Bacterial Proteins - metabolism
Base Sequence
Binding Sites
Blotting, Northern
cytochrome P-450
Cytochrome P-450 Enzyme System - genetics
denitrification
Escherichia coli
Escherichia coli - growth & development
Escherichia coli Proteins
Fusarium - genetics
Fusarium oxysporum
Genes, Fungal
Iron-Sulfur Proteins
Molecular Sequence Data
nitric oxide reductase
Oxidoreductases - genetics
Sequence Homology, Nucleic Acid
Transcription Factors - metabolism
Transcription, Genetic
title Nitric Oxide Reductase Cytochrome P-450 Gene, CYP 55, of the Fungus Fusarium oxysporum Containing a Potential Binding-Site for FNR, the Transcription Factor Involved in the Regulation of Anaerobic Growth of Escherichia coli
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-09T11%3A00%3A57IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Nitric%20Oxide%20Reductase%20Cytochrome%20P-450%20Gene,%20CYP%2055,%20of%20the%20Fungus%20Fusarium%20oxysporum%20Containing%20a%20Potential%20Binding-Site%20for%20FNR,%20the%20Transcription%20Factor%20Involved%20in%20the%20Regulation%20of%20Anaerobic%20Growth%20of%20Escherichia%20coli&rft.jtitle=Journal%20of%20biochemistry%20(Tokyo)&rft.au=Tomura,%20Daisuke&rft.date=1994-07-01&rft.volume=116&rft.issue=1&rft.spage=88&rft.epage=94&rft.pages=88-94&rft.issn=0021-924X&rft_id=info:doi/10.1093/oxfordjournals.jbchem.a124508&rft_dat=%3Cproquest_pubme%3E76904068%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=16839225&rft_id=info:pmid/7798191&rfr_iscdi=true