Conformational changes in aspartate aminotransferase. Effect of active site ligands on peptide hydrogen-deuterium exchange
The conformational responses of aspartate aminotransferase (cytosolic isoenzyme from pig) to the binding of the coenzyme and competitive inhibitors and to the bond rearrangement steps during the transamination reaction were probed by the method of peptide hydrogen deuterium exchange. Binding of the...
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Veröffentlicht in: | The Journal of biological chemistry 1985-09, Vol.260 (21), p.11414-11421 |
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description | The conformational responses of aspartate aminotransferase (cytosolic isoenzyme from pig) to the binding of the coenzyme and competitive inhibitors and to the bond rearrangement steps during the transamination reaction were probed by the method of peptide hydrogen deuterium exchange. Binding of the coenzyme to the apoenzyme results in a marked retardation of hydrogen exchange; binding of the competitive inhibitor maleate to the pyridoxal enzyme induces a retardation of exchange somewhat exceeding that observed in the presence of the transaminating substrate pair glutamate and 2-oxoglutarate (Pfister, K., Kägi, J.H.R., and Christen, P. (1978) Proc. Natl. Acad. Sci. U.S.A. 75, 145-148). On formation of the complex of apoenzyme with N-(5'-phosphopyridoxyl)-L-glutamate or-L-aspartate, analogs of the covalent coenzyme substrate intermediates, a similar exchange retardation occurs. The extent of the exchange retardation in these different functional states of the enzyme correlates with previous results of differential chemical and proteolytic modifications. Apparently, the diverse methods register shifts in one and the same conformational equilibrium. Moreover, the conditions under which peptide hydrogen exchange indicates a pronounced tightening of the protein matrix correspond with those inducing crystallization of the enzyme in the “closed” form. Thus, the transition between the “open” and “closed” form of the enzyme, i.e. the bulk movement of the small domain, as observed and defined by x-ray crystallography (Kirsch, J. F., Eichele, G., Ford, G. C., Vincent, M. G., Jansonius, J. N., Gehring, H., and Christen, P. (1984) J. Mol. Biol. 174, 497-525) is the major structural correlate of the conformational changes undergone by the enzyme in solution. |
doi_str_mv | 10.1016/S0021-9258(17)39042-7 |
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Effect of active site ligands on peptide hydrogen-deuterium exchange</title><source>MEDLINE</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Alma/SFX Local Collection</source><creator>Pfister, K ; Sandmeier, E ; Berchtold, W ; Christen, P</creator><creatorcontrib>Pfister, K ; Sandmeier, E ; Berchtold, W ; Christen, P</creatorcontrib><description>The conformational responses of aspartate aminotransferase (cytosolic isoenzyme from pig) to the binding of the coenzyme and competitive inhibitors and to the bond rearrangement steps during the transamination reaction were probed by the method of peptide hydrogen deuterium exchange. Binding of the coenzyme to the apoenzyme results in a marked retardation of hydrogen exchange; binding of the competitive inhibitor maleate to the pyridoxal enzyme induces a retardation of exchange somewhat exceeding that observed in the presence of the transaminating substrate pair glutamate and 2-oxoglutarate (Pfister, K., Kägi, J.H.R., and Christen, P. (1978) Proc. Natl. Acad. Sci. U.S.A. 75, 145-148). On formation of the complex of apoenzyme with N-(5'-phosphopyridoxyl)-L-glutamate or-L-aspartate, analogs of the covalent coenzyme substrate intermediates, a similar exchange retardation occurs. The extent of the exchange retardation in these different functional states of the enzyme correlates with previous results of differential chemical and proteolytic modifications. Apparently, the diverse methods register shifts in one and the same conformational equilibrium. Moreover, the conditions under which peptide hydrogen exchange indicates a pronounced tightening of the protein matrix correspond with those inducing crystallization of the enzyme in the “closed” form. Thus, the transition between the “open” and “closed” form of the enzyme, i.e. the bulk movement of the small domain, as observed and defined by x-ray crystallography (Kirsch, J. F., Eichele, G., Ford, G. C., Vincent, M. G., Jansonius, J. N., Gehring, H., and Christen, P. (1984) J. Mol. Biol. 174, 497-525) is the major structural correlate of the conformational changes undergone by the enzyme in solution.</description><identifier>ISSN: 0021-9258</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1016/S0021-9258(17)39042-7</identifier><identifier>PMID: 4044562</identifier><identifier>CODEN: JBCHA3</identifier><language>eng</language><publisher>Bethesda, MD: Elsevier Inc</publisher><subject>Analytical, structural and metabolic biochemistry ; Animals ; Aspartate Aminotransferases ; Binding Sites ; Biological and medical sciences ; Deuterium ; Enzymes and enzyme inhibitors ; Fundamental and applied biological sciences. Psychology ; Hydrogen ; Ligands ; Maleates ; Peptides ; Protein Conformation ; Swine ; Transferases ; X-Ray Diffraction</subject><ispartof>The Journal of biological chemistry, 1985-09, Vol.260 (21), p.11414-11421</ispartof><rights>1985 © 1985 ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology.</rights><rights>1986 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c465t-567a8e03733a1a02c8953672c8fbdf89372e7cdb242fe344907930b7ce93b43f3</citedby><cites>FETCH-LOGICAL-c465t-567a8e03733a1a02c8953672c8fbdf89372e7cdb242fe344907930b7ce93b43f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=8563328$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/4044562$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pfister, K</creatorcontrib><creatorcontrib>Sandmeier, E</creatorcontrib><creatorcontrib>Berchtold, W</creatorcontrib><creatorcontrib>Christen, P</creatorcontrib><title>Conformational changes in aspartate aminotransferase. Effect of active site ligands on peptide hydrogen-deuterium exchange</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>The conformational responses of aspartate aminotransferase (cytosolic isoenzyme from pig) to the binding of the coenzyme and competitive inhibitors and to the bond rearrangement steps during the transamination reaction were probed by the method of peptide hydrogen deuterium exchange. Binding of the coenzyme to the apoenzyme results in a marked retardation of hydrogen exchange; binding of the competitive inhibitor maleate to the pyridoxal enzyme induces a retardation of exchange somewhat exceeding that observed in the presence of the transaminating substrate pair glutamate and 2-oxoglutarate (Pfister, K., Kägi, J.H.R., and Christen, P. (1978) Proc. Natl. Acad. Sci. U.S.A. 75, 145-148). On formation of the complex of apoenzyme with N-(5'-phosphopyridoxyl)-L-glutamate or-L-aspartate, analogs of the covalent coenzyme substrate intermediates, a similar exchange retardation occurs. The extent of the exchange retardation in these different functional states of the enzyme correlates with previous results of differential chemical and proteolytic modifications. Apparently, the diverse methods register shifts in one and the same conformational equilibrium. Moreover, the conditions under which peptide hydrogen exchange indicates a pronounced tightening of the protein matrix correspond with those inducing crystallization of the enzyme in the “closed” form. Thus, the transition between the “open” and “closed” form of the enzyme, i.e. the bulk movement of the small domain, as observed and defined by x-ray crystallography (Kirsch, J. F., Eichele, G., Ford, G. C., Vincent, M. G., Jansonius, J. N., Gehring, H., and Christen, P. (1984) J. Mol. Biol. 174, 497-525) is the major structural correlate of the conformational changes undergone by the enzyme in solution.</description><subject>Analytical, structural and metabolic biochemistry</subject><subject>Animals</subject><subject>Aspartate Aminotransferases</subject><subject>Binding Sites</subject><subject>Biological and medical sciences</subject><subject>Deuterium</subject><subject>Enzymes and enzyme inhibitors</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hydrogen</subject><subject>Ligands</subject><subject>Maleates</subject><subject>Peptides</subject><subject>Protein Conformation</subject><subject>Swine</subject><subject>Transferases</subject><subject>X-Ray Diffraction</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1985</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkM1u1DAUhS0EKtPCI1TyAiG6SPFf4mSFqlH5kSqxACR2luNcT4wSO9hOoTw9ns5oWOLNXdzv-Fx9CF1Sck0Jbd5-IYTRqmN1-4bKK94RwSr5BG0oaXnFa_r9KdqckOfoPKUfpDzR0TN0JogQdcM26M82eBvirLMLXk_YjNrvIGHnsU6LjllnwHp2PuSofbIQdYJrfGstmIyDxdpkdw84ucJNbqf9kHDweIEluwHw-DDEsANfDbBmiG6dMfw-lLxAz6yeErw8zgv07f3t1-3H6u7zh0_bm7vKiKbOVd1I3QLhknNNNWGm7WreyDJtP9i245KBNEPPBLPAheiI7DjppYGO94JbfoFeH_5dYvi5QspqdsnANGkPYU1KNrxtSksB6wNoYkgpglVLdLOOD4oStXeuHp2rvVBFpXp0rva5y2PB2s8wnFJHyWX_6rjXyejJFpHGpRPW1g3nrP2HjW43_nIRVO-CGWFWrCGq9FIqqCjYuwMGxdm9g6iSceANDCVishqC-8-9fwEwias6</recordid><startdate>19850925</startdate><enddate>19850925</enddate><creator>Pfister, K</creator><creator>Sandmeier, E</creator><creator>Berchtold, W</creator><creator>Christen, P</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19850925</creationdate><title>Conformational changes in aspartate aminotransferase. Effect of active site ligands on peptide hydrogen-deuterium exchange</title><author>Pfister, K ; Sandmeier, E ; Berchtold, W ; Christen, P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c465t-567a8e03733a1a02c8953672c8fbdf89372e7cdb242fe344907930b7ce93b43f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1985</creationdate><topic>Analytical, structural and metabolic biochemistry</topic><topic>Animals</topic><topic>Aspartate Aminotransferases</topic><topic>Binding Sites</topic><topic>Biological and medical sciences</topic><topic>Deuterium</topic><topic>Enzymes and enzyme inhibitors</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hydrogen</topic><topic>Ligands</topic><topic>Maleates</topic><topic>Peptides</topic><topic>Protein Conformation</topic><topic>Swine</topic><topic>Transferases</topic><topic>X-Ray Diffraction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pfister, K</creatorcontrib><creatorcontrib>Sandmeier, E</creatorcontrib><creatorcontrib>Berchtold, W</creatorcontrib><creatorcontrib>Christen, P</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pfister, K</au><au>Sandmeier, E</au><au>Berchtold, W</au><au>Christen, P</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Conformational changes in aspartate aminotransferase. Effect of active site ligands on peptide hydrogen-deuterium exchange</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>1985-09-25</date><risdate>1985</risdate><volume>260</volume><issue>21</issue><spage>11414</spage><epage>11421</epage><pages>11414-11421</pages><issn>0021-9258</issn><eissn>1083-351X</eissn><coden>JBCHA3</coden><abstract>The conformational responses of aspartate aminotransferase (cytosolic isoenzyme from pig) to the binding of the coenzyme and competitive inhibitors and to the bond rearrangement steps during the transamination reaction were probed by the method of peptide hydrogen deuterium exchange. Binding of the coenzyme to the apoenzyme results in a marked retardation of hydrogen exchange; binding of the competitive inhibitor maleate to the pyridoxal enzyme induces a retardation of exchange somewhat exceeding that observed in the presence of the transaminating substrate pair glutamate and 2-oxoglutarate (Pfister, K., Kägi, J.H.R., and Christen, P. (1978) Proc. Natl. Acad. Sci. U.S.A. 75, 145-148). On formation of the complex of apoenzyme with N-(5'-phosphopyridoxyl)-L-glutamate or-L-aspartate, analogs of the covalent coenzyme substrate intermediates, a similar exchange retardation occurs. The extent of the exchange retardation in these different functional states of the enzyme correlates with previous results of differential chemical and proteolytic modifications. Apparently, the diverse methods register shifts in one and the same conformational equilibrium. Moreover, the conditions under which peptide hydrogen exchange indicates a pronounced tightening of the protein matrix correspond with those inducing crystallization of the enzyme in the “closed” form. Thus, the transition between the “open” and “closed” form of the enzyme, i.e. the bulk movement of the small domain, as observed and defined by x-ray crystallography (Kirsch, J. F., Eichele, G., Ford, G. C., Vincent, M. G., Jansonius, J. N., Gehring, H., and Christen, P. (1984) J. Mol. Biol. 174, 497-525) is the major structural correlate of the conformational changes undergone by the enzyme in solution.</abstract><cop>Bethesda, MD</cop><pub>Elsevier Inc</pub><pmid>4044562</pmid><doi>10.1016/S0021-9258(17)39042-7</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Analytical, structural and metabolic biochemistry Animals Aspartate Aminotransferases Binding Sites Biological and medical sciences Deuterium Enzymes and enzyme inhibitors Fundamental and applied biological sciences. Psychology Hydrogen Ligands Maleates Peptides Protein Conformation Swine Transferases X-Ray Diffraction |
title | Conformational changes in aspartate aminotransferase. Effect of active site ligands on peptide hydrogen-deuterium exchange |
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