Studies of the Binding Specificity of Concanavalin A. Nature of the Extended Binding Site for Asparagine-Linked Carbohydrates
In the preceding paper [Mandal, D.K., Kishore, N., and Brewer, C.F. (1994) Biochemistry (preceding paper in this issue)] the trisaccharide 3,6-di-O-(alpha-D-mannopyranosyl)-D-mannose, which is present in all asparagine-linked carbohydrates, was shown by titration microcalorimetry to bind to the lect...
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Veröffentlicht in: | Biochemistry (Easton) 1994-02, Vol.33 (5), p.1157-1162 |
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description | In the preceding paper [Mandal, D.K., Kishore, N., and Brewer, C.F. (1994) Biochemistry (preceding paper in this issue)] the trisaccharide 3,6-di-O-(alpha-D-mannopyranosyl)-D-mannose, which is present in all asparagine-linked carbohydrates, was shown by titration microcalorimetry to bind to the lectin concanavalin A (Con A) with nearly -6 kcal mol-1 greater enthalpy change (delta H) than methyl alpha-D-mannopyranoside (Me alpha Man). These results indicate that Con A possesses an extended binding site for the trisaccharide. In the present paper, we have investigated the binding of a series of synthetic analogs of the methyl alpha-anomer of the trisaccharide using hemagglutination inhibition, solvent proton magnetic relaxation dispersion (NMRD), near ultraviolet circular dichroism, and titration microcalorimetry measurements. Four of the analogs tested possess an alpha-glucosyl or alpha-galactosyl residue substituted at either the alpha(1-6) or alpha(1-3) position. Analysis of the data indicates that the alpha(1-6) residue of the parent trimannoside binds to the so-called monosaccharide site and the alpha(1-3) residue to a weaker secondary site. Binding at the secondary site involves unfavorable interactions of the 2-equatorial hydroxyl of the alpha(1-3)Glc derivative since this analog binds with 12-fold lower affinity and -3.4 kcal mol-1 lesser delta H than the trimannoside, whereas the alpha(1-3)-2-deoxyGlc analog possesses essentially the same affinity and delta H as the trimannoside. NMRD data show that the alpha(1-3) 2-, 3-, 4-, and 6-deoxy derivatives of the trimannoside induces essentially the similar conformational changes in the protein as that of the parent trimannoside. However, the calorimetry data show that only the 3-deoxy analog binds with approximately 10-fold lower affinity and -3.4 kcal mol-1 lesser enthalpy change. This indicates that the 3-hydroxyl of the alpha(1-3)Man makes a specific hydrogen bond with the protein at a secondary binding site |
doi_str_mv | 10.1021/bi00171a015 |
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Nature of the Extended Binding Site for Asparagine-Linked Carbohydrates</title><source>MEDLINE</source><source>ACS Publications</source><creator>Mandal, Dipak K ; Bhattacharyya, Lokesh ; Koenig, Seymour H ; Brown, Rodney D ; Oscarson, Stefan ; Brewer, C. Fred</creator><creatorcontrib>Mandal, Dipak K ; Bhattacharyya, Lokesh ; Koenig, Seymour H ; Brown, Rodney D ; Oscarson, Stefan ; Brewer, C. Fred</creatorcontrib><description>In the preceding paper [Mandal, D.K., Kishore, N., and Brewer, C.F. (1994) Biochemistry (preceding paper in this issue)] the trisaccharide 3,6-di-O-(alpha-D-mannopyranosyl)-D-mannose, which is present in all asparagine-linked carbohydrates, was shown by titration microcalorimetry to bind to the lectin concanavalin A (Con A) with nearly -6 kcal mol-1 greater enthalpy change (delta H) than methyl alpha-D-mannopyranoside (Me alpha Man). These results indicate that Con A possesses an extended binding site for the trisaccharide. In the present paper, we have investigated the binding of a series of synthetic analogs of the methyl alpha-anomer of the trisaccharide using hemagglutination inhibition, solvent proton magnetic relaxation dispersion (NMRD), near ultraviolet circular dichroism, and titration microcalorimetry measurements. Four of the analogs tested possess an alpha-glucosyl or alpha-galactosyl residue substituted at either the alpha(1-6) or alpha(1-3) position. Analysis of the data indicates that the alpha(1-6) residue of the parent trimannoside binds to the so-called monosaccharide site and the alpha(1-3) residue to a weaker secondary site. Binding at the secondary site involves unfavorable interactions of the 2-equatorial hydroxyl of the alpha(1-3)Glc derivative since this analog binds with 12-fold lower affinity and -3.4 kcal mol-1 lesser delta H than the trimannoside, whereas the alpha(1-3)-2-deoxyGlc analog possesses essentially the same affinity and delta H as the trimannoside. NMRD data show that the alpha(1-3) 2-, 3-, 4-, and 6-deoxy derivatives of the trimannoside induces essentially the similar conformational changes in the protein as that of the parent trimannoside. However, the calorimetry data show that only the 3-deoxy analog binds with approximately 10-fold lower affinity and -3.4 kcal mol-1 lesser enthalpy change. This indicates that the 3-hydroxyl of the alpha(1-3)Man makes a specific hydrogen bond with the protein at a secondary binding site</description><identifier>ISSN: 0006-2960</identifier><identifier>EISSN: 1520-4995</identifier><identifier>DOI: 10.1021/bi00171a015</identifier><identifier>PMID: 8110747</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>ASPARAGINA ; ASPARAGINE ; Asparagine - metabolism ; Binding Sites ; Calorimetry - methods ; CANAVALIA ENSIFORMIS ; Carbohydrate Metabolism ; Carbohydrate Sequence ; Circular Dichroism ; Concanavalin A - metabolism ; FISICA ; Hemagglutination Tests ; LECTINA ; LECTINE ; Magnetic Resonance Spectroscopy ; MANNOSE ; MANOSA ; Molecular Sequence Data ; OLIGOSACARIDOS ; OLIGOSACCHARIDE ; PHYSIQUE ; Spectrophotometry, Ultraviolet ; Thermodynamics</subject><ispartof>Biochemistry (Easton), 1994-02, Vol.33 (5), p.1157-1162</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a439t-6362a1607db799e2a9a87b205be0b5299c0b629a7b461dc8796e456f7c28aec33</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/bi00171a015$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/bi00171a015$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>315,782,786,2769,27085,27933,27934,56747,56797</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8110747$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mandal, Dipak K</creatorcontrib><creatorcontrib>Bhattacharyya, Lokesh</creatorcontrib><creatorcontrib>Koenig, Seymour H</creatorcontrib><creatorcontrib>Brown, Rodney D</creatorcontrib><creatorcontrib>Oscarson, Stefan</creatorcontrib><creatorcontrib>Brewer, C. Fred</creatorcontrib><title>Studies of the Binding Specificity of Concanavalin A. Nature of the Extended Binding Site for Asparagine-Linked Carbohydrates</title><title>Biochemistry (Easton)</title><addtitle>Biochemistry</addtitle><description>In the preceding paper [Mandal, D.K., Kishore, N., and Brewer, C.F. (1994) Biochemistry (preceding paper in this issue)] the trisaccharide 3,6-di-O-(alpha-D-mannopyranosyl)-D-mannose, which is present in all asparagine-linked carbohydrates, was shown by titration microcalorimetry to bind to the lectin concanavalin A (Con A) with nearly -6 kcal mol-1 greater enthalpy change (delta H) than methyl alpha-D-mannopyranoside (Me alpha Man). These results indicate that Con A possesses an extended binding site for the trisaccharide. In the present paper, we have investigated the binding of a series of synthetic analogs of the methyl alpha-anomer of the trisaccharide using hemagglutination inhibition, solvent proton magnetic relaxation dispersion (NMRD), near ultraviolet circular dichroism, and titration microcalorimetry measurements. Four of the analogs tested possess an alpha-glucosyl or alpha-galactosyl residue substituted at either the alpha(1-6) or alpha(1-3) position. Analysis of the data indicates that the alpha(1-6) residue of the parent trimannoside binds to the so-called monosaccharide site and the alpha(1-3) residue to a weaker secondary site. Binding at the secondary site involves unfavorable interactions of the 2-equatorial hydroxyl of the alpha(1-3)Glc derivative since this analog binds with 12-fold lower affinity and -3.4 kcal mol-1 lesser delta H than the trimannoside, whereas the alpha(1-3)-2-deoxyGlc analog possesses essentially the same affinity and delta H as the trimannoside. NMRD data show that the alpha(1-3) 2-, 3-, 4-, and 6-deoxy derivatives of the trimannoside induces essentially the similar conformational changes in the protein as that of the parent trimannoside. However, the calorimetry data show that only the 3-deoxy analog binds with approximately 10-fold lower affinity and -3.4 kcal mol-1 lesser enthalpy change. This indicates that the 3-hydroxyl of the alpha(1-3)Man makes a specific hydrogen bond with the protein at a secondary binding site</description><subject>ASPARAGINA</subject><subject>ASPARAGINE</subject><subject>Asparagine - metabolism</subject><subject>Binding Sites</subject><subject>Calorimetry - methods</subject><subject>CANAVALIA ENSIFORMIS</subject><subject>Carbohydrate Metabolism</subject><subject>Carbohydrate Sequence</subject><subject>Circular Dichroism</subject><subject>Concanavalin A - metabolism</subject><subject>FISICA</subject><subject>Hemagglutination Tests</subject><subject>LECTINA</subject><subject>LECTINE</subject><subject>Magnetic Resonance Spectroscopy</subject><subject>MANNOSE</subject><subject>MANOSA</subject><subject>Molecular Sequence Data</subject><subject>OLIGOSACARIDOS</subject><subject>OLIGOSACCHARIDE</subject><subject>PHYSIQUE</subject><subject>Spectrophotometry, Ultraviolet</subject><subject>Thermodynamics</subject><issn>0006-2960</issn><issn>1520-4995</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1994</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkE1vEzEQhi0EKqFw4oaEtCc4VFvs_bDXxyTqB1JakNKerVnvbOo2sVPbi5oD_x1HGwqHnsaj55kZ6yXkI6OnjBbsW2soZYIBZfUrMmF1QfNKyvo1mVBKeV5ITt-SdyHcp7aiojoiRw1j6SEm5PcyDp3BkLk-i3eYzYztjF1lyy1q0xtt4m6P5s5qsPAL1sZm09PsGuLg8e_Q2VNE22H3b9pEzHrns2nYgoeVsZgvjH1Iyhx86-52nYeI4T1508M64IdDPSa352c388t88ePi-3y6yKEqZcx5yQtgnIquFVJiARIa0Ra0bpG2dSGlpi0vJIi24qzTjZAcq5r3QhcNoC7LY_Jl3Lv17nHAENXGBI3rNVh0Q1Bif6HmVRJPRlF7F4LHXm292YDfKUbVPmz1X9jJ_nxYO7Qb7J7dQ7qJ5yM3IeLTMwb_oLgoRa1ufi4Vv5xdzZrrRp0n_9Po9-AUrLwJ6nYpq5pJ2ST4dYSgg7p3g7cpsRe_9QfsfZ1N</recordid><startdate>19940208</startdate><enddate>19940208</enddate><creator>Mandal, Dipak K</creator><creator>Bhattacharyya, Lokesh</creator><creator>Koenig, Seymour H</creator><creator>Brown, Rodney D</creator><creator>Oscarson, Stefan</creator><creator>Brewer, C. Fred</creator><general>American Chemical Society</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19940208</creationdate><title>Studies of the Binding Specificity of Concanavalin A. Nature of the Extended Binding Site for Asparagine-Linked Carbohydrates</title><author>Mandal, Dipak K ; Bhattacharyya, Lokesh ; Koenig, Seymour H ; Brown, Rodney D ; Oscarson, Stefan ; Brewer, C. Fred</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a439t-6362a1607db799e2a9a87b205be0b5299c0b629a7b461dc8796e456f7c28aec33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1994</creationdate><topic>ASPARAGINA</topic><topic>ASPARAGINE</topic><topic>Asparagine - metabolism</topic><topic>Binding Sites</topic><topic>Calorimetry - methods</topic><topic>CANAVALIA ENSIFORMIS</topic><topic>Carbohydrate Metabolism</topic><topic>Carbohydrate Sequence</topic><topic>Circular Dichroism</topic><topic>Concanavalin A - metabolism</topic><topic>FISICA</topic><topic>Hemagglutination Tests</topic><topic>LECTINA</topic><topic>LECTINE</topic><topic>Magnetic Resonance Spectroscopy</topic><topic>MANNOSE</topic><topic>MANOSA</topic><topic>Molecular Sequence Data</topic><topic>OLIGOSACARIDOS</topic><topic>OLIGOSACCHARIDE</topic><topic>PHYSIQUE</topic><topic>Spectrophotometry, Ultraviolet</topic><topic>Thermodynamics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mandal, Dipak K</creatorcontrib><creatorcontrib>Bhattacharyya, Lokesh</creatorcontrib><creatorcontrib>Koenig, Seymour H</creatorcontrib><creatorcontrib>Brown, Rodney D</creatorcontrib><creatorcontrib>Oscarson, Stefan</creatorcontrib><creatorcontrib>Brewer, C. Fred</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mandal, Dipak K</au><au>Bhattacharyya, Lokesh</au><au>Koenig, Seymour H</au><au>Brown, Rodney D</au><au>Oscarson, Stefan</au><au>Brewer, C. Fred</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Studies of the Binding Specificity of Concanavalin A. Nature of the Extended Binding Site for Asparagine-Linked Carbohydrates</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>1994-02-08</date><risdate>1994</risdate><volume>33</volume><issue>5</issue><spage>1157</spage><epage>1162</epage><pages>1157-1162</pages><issn>0006-2960</issn><eissn>1520-4995</eissn><abstract>In the preceding paper [Mandal, D.K., Kishore, N., and Brewer, C.F. (1994) Biochemistry (preceding paper in this issue)] the trisaccharide 3,6-di-O-(alpha-D-mannopyranosyl)-D-mannose, which is present in all asparagine-linked carbohydrates, was shown by titration microcalorimetry to bind to the lectin concanavalin A (Con A) with nearly -6 kcal mol-1 greater enthalpy change (delta H) than methyl alpha-D-mannopyranoside (Me alpha Man). These results indicate that Con A possesses an extended binding site for the trisaccharide. In the present paper, we have investigated the binding of a series of synthetic analogs of the methyl alpha-anomer of the trisaccharide using hemagglutination inhibition, solvent proton magnetic relaxation dispersion (NMRD), near ultraviolet circular dichroism, and titration microcalorimetry measurements. Four of the analogs tested possess an alpha-glucosyl or alpha-galactosyl residue substituted at either the alpha(1-6) or alpha(1-3) position. Analysis of the data indicates that the alpha(1-6) residue of the parent trimannoside binds to the so-called monosaccharide site and the alpha(1-3) residue to a weaker secondary site. Binding at the secondary site involves unfavorable interactions of the 2-equatorial hydroxyl of the alpha(1-3)Glc derivative since this analog binds with 12-fold lower affinity and -3.4 kcal mol-1 lesser delta H than the trimannoside, whereas the alpha(1-3)-2-deoxyGlc analog possesses essentially the same affinity and delta H as the trimannoside. NMRD data show that the alpha(1-3) 2-, 3-, 4-, and 6-deoxy derivatives of the trimannoside induces essentially the similar conformational changes in the protein as that of the parent trimannoside. However, the calorimetry data show that only the 3-deoxy analog binds with approximately 10-fold lower affinity and -3.4 kcal mol-1 lesser enthalpy change. This indicates that the 3-hydroxyl of the alpha(1-3)Man makes a specific hydrogen bond with the protein at a secondary binding site</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>8110747</pmid><doi>10.1021/bi00171a015</doi><tpages>6</tpages></addata></record> |
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subjects | ASPARAGINA ASPARAGINE Asparagine - metabolism Binding Sites Calorimetry - methods CANAVALIA ENSIFORMIS Carbohydrate Metabolism Carbohydrate Sequence Circular Dichroism Concanavalin A - metabolism FISICA Hemagglutination Tests LECTINA LECTINE Magnetic Resonance Spectroscopy MANNOSE MANOSA Molecular Sequence Data OLIGOSACARIDOS OLIGOSACCHARIDE PHYSIQUE Spectrophotometry, Ultraviolet Thermodynamics |
title | Studies of the Binding Specificity of Concanavalin A. Nature of the Extended Binding Site for Asparagine-Linked Carbohydrates |
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