Mangrove microniches determine the structural and functional diversity of enriched petroleum hydrocarbon-degrading consortia

In this study, the combination of culture enrichments and molecular tools was used to identify bacterial guilds, plasmids and functional genes potentially important in the process of petroleum hydrocarbon (PH) decontamination in mangrove microniches (rhizospheres and bulk sediment). In addition, we...

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Veröffentlicht in:	FEMS microbiology ecology 2010-11, Vol.74 (2), p.276-290
Hauptverfasser:	Gomes, Newton C.M, Flocco, Cecilia G, Costa, Rodrigo, Junca, Howard, Vilchez, Ramiro, Pieper, Dietmar H, Krögerrecklenfort, Ellen, Paranhos, Rodolfo, Mendonça-Hagler, Leda C.S, Smalla, Kornelia
Format:	Artikel
Sprache:	eng
Schlagworte:	Abundance Animal and plant ecology Animal, plant and microbial ecology Bacteria Bacteria - classification Bacteria - genetics Bacteria - metabolism Biological and medical sciences Brackish water ecosystems Brazil Composition Consortia Decontamination Degradation Deoxyribonucleic acid DNA DNA microarrays DNA, Bacterial - analysis Ecology Electrophoresis Enrichment Environmental DNA Environmental Pollutants - metabolism Fundamental and applied biological sciences. Psychology Gel electrophoresis Genes Genotypes Geologic Sediments - microbiology Guanabara bay Guilds Hybridization Hydrocarbon-degrading bacteria hydrocarbonoclastic bacteria Hydrocarbons Hydrocarbons - metabolism mangrove Microbial ecology Microbiology Naphthalene Oil pollution Oligonucleotide Array Sequence Analysis Petroleum Petroleum hydrocarbons Plasmids Polymerase chain reaction Rhizophoraceae - microbiology Rhizosphere RNA, Ribosomal, 16S - genetics Sediment samplers Sediments Sequence Analysis, DNA Structure-function relationships Synecology Water Microbiology
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