Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways

Most heritable traits, including disease susceptibility, are affected by interactions between multiple genes. However, we understand little about how genes interact because very few possible genetic interactions have been explored experimentally. We have used RNA interference in Caenorhabditis elega...

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Veröffentlicht in:Nature genetics 2006-08, Vol.38 (8), p.896-903
Hauptverfasser: Fraser, Andrew G, Lehner, Ben, Crombie, Catriona, Tischler, Julia, Fortunato, Angelo
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container_issue 8
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creator Fraser, Andrew G
Lehner, Ben
Crombie, Catriona
Tischler, Julia
Fortunato, Angelo
description Most heritable traits, including disease susceptibility, are affected by interactions between multiple genes. However, we understand little about how genes interact because very few possible genetic interactions have been explored experimentally. We have used RNA interference in Caenorhabditis elegans to systematically test ∼65,000 pairs of genes for their ability to interact genetically. We identify ∼350 genetic interactions between genes functioning in signaling pathways that are mutated in human diseases, including components of the EGF/Ras, Notch and Wnt pathways. Most notably, we identify a class of highly connected 'hub' genes: inactivation of these genes can enhance the phenotypic consequences of mutation of many different genes. These hub genes all encode chromatin regulators, and their activity as genetic hubs seems to be conserved across animals. We propose that these genes function as general buffers of genetic variation and that these hub genes may act as modifier genes in multiple, mechanistically unrelated genetic diseases in humans.
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subjects Agriculture
Animal Genetics and Genomics
Animals
Biological and medical sciences
Biomedical and Life Sciences
Biomedicine
Buffers
Caenorhabditis elegans
Caenorhabditis elegans - genetics
Caenorhabditis elegans - metabolism
Cancer Research
Cell physiology
Chromosome Mapping
Classical genetics, quantitative genetics, hybrids
Disease
Enhancer Elements, Genetic
Epidermal Growth Factor - genetics
Female
Fundamental and applied biological sciences. Psychology
Gene expression
Gene Function
Genes, Helminth
Genetic aspects
Genetic diversity
Genetic variation
Genetics of eukaryotes. Biological and molecular evolution
Genomics
Human Genetics
Humans
Inactivation
Methods, theories and miscellaneous
Molecular and cellular biology
Mutation
Phenotype
Physiological aspects
RNA Interference
Signal Transduction
Vulva - growth & development
Worms
title Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways
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