Cloning and expression cDNA encoding human galactocerebrosidase, the enzyme deficient in globoid cell leukodystrophy
Globold cell leukodystrophy (Krabbe disease) is an autosomal recessive disorder resulting from the deficiency of galactocerebrosidase (GALC) activity. GALC is responsible for the lysosomal catabollsm of galactosytceramide, a major llpid In myelln, kidney and epithelial cells of small intestine and c...
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Veröffentlicht in: | Human molecular genetics 1993-11, Vol.2 (11), p.1841-1846 |
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description | Globold cell leukodystrophy (Krabbe disease) is an autosomal recessive disorder resulting from the deficiency of galactocerebrosidase (GALC) activity. GALC is responsible for the lysosomal catabollsm of galactosytceramide, a major llpid In myelln, kidney and epithelial cells of small intestine and colon. We describe the molecular cloning of human GALC cDNA and its expression in COS-1 cells. Degenerate PCR primers, derived from N-terminal amino acid sequence from the 51 KDa band from human brain, were used to amplify cat testes RNA, and the resulting product was used to screen human testes and brain libraries. Two overlapping clones contained the total protein coding region, while additional clones and PCR amplification were needed to obtain the complete 3' end of the cDNA. The 3795 bp obtained Include 47 bp 5' to the initiation start site, 2007 bp of open reading frame (coding for 669 amino acids), and 1741 bp of 3' untranslated sequence. Modification of the sequence surrounding the initiation codon to one more favorable for expression, resulted in a 6-fold increase in GALC activity in transfected COS-1 cells. The isolation of this clone will permit investigations into the causes for GALC deficiency in humans and available animal models, development of more accurate tests for patient and carrier identification, and evaluation of methods for effectively treating GALC deficiency, initially using the animal models. |
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GALC is responsible for the lysosomal catabollsm of galactosytceramide, a major llpid In myelln, kidney and epithelial cells of small intestine and colon. We describe the molecular cloning of human GALC cDNA and its expression in COS-1 cells. Degenerate PCR primers, derived from N-terminal amino acid sequence from the 51 KDa band from human brain, were used to amplify cat testes RNA, and the resulting product was used to screen human testes and brain libraries. Two overlapping clones contained the total protein coding region, while additional clones and PCR amplification were needed to obtain the complete 3' end of the cDNA. The 3795 bp obtained Include 47 bp 5' to the initiation start site, 2007 bp of open reading frame (coding for 669 amino acids), and 1741 bp of 3' untranslated sequence. Modification of the sequence surrounding the initiation codon to one more favorable for expression, resulted in a 6-fold increase in GALC activity in transfected COS-1 cells. The isolation of this clone will permit investigations into the causes for GALC deficiency in humans and available animal models, development of more accurate tests for patient and carrier identification, and evaluation of methods for effectively treating GALC deficiency, initially using the animal models.</description><identifier>ISSN: 0964-6906</identifier><identifier>EISSN: 1460-2083</identifier><identifier>DOI: 10.1093/hmg/2.11.1841</identifier><identifier>PMID: 8281145</identifier><language>eng</language><publisher>Oxford: Oxford University Press</publisher><subject>Amino Acid Sequence ; Animals ; Base Sequence ; Biological and medical sciences ; Brain - enzymology ; Cats ; cDNA ; Cell Line ; cloning ; Cloning, Molecular ; DNA Primers ; expression ; Fundamental and applied biological sciences. Psychology ; galactoslylceramidase ; Galactosylceramidase - biosynthesis ; Galactosylceramidase - genetics ; Galactosylceramidase - metabolism ; Gene Expression ; Gene Library ; genes ; Genes. Genome ; Kinetics ; Krabbe's disease ; leukodystrophy ; Leukodystrophy, Globoid Cell - enzymology ; Leukodystrophy, Globoid Cell - genetics ; Male ; man ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; nucleotide sequence ; Polymerase Chain Reaction ; prediction ; Recombinant Proteins - biosynthesis ; Recombinant Proteins - metabolism ; Sequence Homology, Amino Acid ; Sequence Homology, Nucleic Acid ; Testis - enzymology ; Transfection</subject><ispartof>Human molecular genetics, 1993-11, Vol.2 (11), p.1841-1846</ispartof><rights>1994 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c452t-8a178ee39ed808bc3bee316744e126f69b6c2bcef68c46df106ef46b5c59d7d43</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=4022346$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8281145$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chen, Yue Qun</creatorcontrib><creatorcontrib>Rafi, Mohammad A.</creatorcontrib><creatorcontrib>de Gala, Gregory</creatorcontrib><creatorcontrib>Wenger, David A.</creatorcontrib><title>Cloning and expression cDNA encoding human galactocerebrosidase, the enzyme deficient in globoid cell leukodystrophy</title><title>Human molecular genetics</title><addtitle>Hum Mol Genet</addtitle><description>Globold cell leukodystrophy (Krabbe disease) is an autosomal recessive disorder resulting from the deficiency of galactocerebrosidase (GALC) activity. GALC is responsible for the lysosomal catabollsm of galactosytceramide, a major llpid In myelln, kidney and epithelial cells of small intestine and colon. We describe the molecular cloning of human GALC cDNA and its expression in COS-1 cells. Degenerate PCR primers, derived from N-terminal amino acid sequence from the 51 KDa band from human brain, were used to amplify cat testes RNA, and the resulting product was used to screen human testes and brain libraries. Two overlapping clones contained the total protein coding region, while additional clones and PCR amplification were needed to obtain the complete 3' end of the cDNA. The 3795 bp obtained Include 47 bp 5' to the initiation start site, 2007 bp of open reading frame (coding for 669 amino acids), and 1741 bp of 3' untranslated sequence. Modification of the sequence surrounding the initiation codon to one more favorable for expression, resulted in a 6-fold increase in GALC activity in transfected COS-1 cells. The isolation of this clone will permit investigations into the causes for GALC deficiency in humans and available animal models, development of more accurate tests for patient and carrier identification, and evaluation of methods for effectively treating GALC deficiency, initially using the animal models.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Brain - enzymology</subject><subject>Cats</subject><subject>cDNA</subject><subject>Cell Line</subject><subject>cloning</subject><subject>Cloning, Molecular</subject><subject>DNA Primers</subject><subject>expression</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>galactoslylceramidase</subject><subject>Galactosylceramidase - biosynthesis</subject><subject>Galactosylceramidase - genetics</subject><subject>Galactosylceramidase - metabolism</subject><subject>Gene Expression</subject><subject>Gene Library</subject><subject>genes</subject><subject>Genes. Genome</subject><subject>Kinetics</subject><subject>Krabbe's disease</subject><subject>leukodystrophy</subject><subject>Leukodystrophy, Globoid Cell - enzymology</subject><subject>Leukodystrophy, Globoid Cell - genetics</subject><subject>Male</subject><subject>man</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequence</subject><subject>Polymerase Chain Reaction</subject><subject>prediction</subject><subject>Recombinant Proteins - biosynthesis</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Testis - enzymology</subject><subject>Transfection</subject><issn>0964-6906</issn><issn>1460-2083</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1993</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUFv1DAQhS1EVbaFI0ckHxAnsvU4juMcq4W2qLvAASTExXLsya5pEm_tROr215NVV9tjT6PR-_Rm9B4h74HNgVX5xaZbX_A5wByUgFdkBkKyjDOVvyYzVkmRyYrJN-QspX-MgRR5eUpOFVcAopiRYdGG3vdranpH8WEbMSUfemq_fL-k2Nvg9uJm7ExP16Y1dggWI9YxJO9Mws902OAEPu46pA4bbz32A_UT3YY6eEctti1tcbwLbpeGGLab3Vty0pg24bvDPCe_r77-Wtxkyx_X3xaXy8yKgg-ZMlAqxLxCp5iqbV5PC8hSCAQuG1nV0vLaYiOVFdI1wCQ2QtaFLSpXOpGfk09PvtsY7kdMg-582v9jegxj0qWEgjHJXgRBykqJkk9g9gTaKYAUsdHb6DsTdxqY3tehpzo01wB6X8fEfzgYj3WH7kgf8p_0jwfdJGvaJpre-nTEBOM8F_L5rE8DPhxlE--0LPOy0Dd__urV9XIFVz9v9Sr_D2SrpDc</recordid><startdate>19931101</startdate><enddate>19931101</enddate><creator>Chen, Yue Qun</creator><creator>Rafi, Mohammad A.</creator><creator>de Gala, Gregory</creator><creator>Wenger, David A.</creator><general>Oxford University Press</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T3</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>19931101</creationdate><title>Cloning and expression cDNA encoding human galactocerebrosidase, the enzyme deficient in globoid cell leukodystrophy</title><author>Chen, Yue Qun ; Rafi, Mohammad A. ; de Gala, Gregory ; Wenger, David A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c452t-8a178ee39ed808bc3bee316744e126f69b6c2bcef68c46df106ef46b5c59d7d43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1993</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Brain - enzymology</topic><topic>Cats</topic><topic>cDNA</topic><topic>Cell Line</topic><topic>cloning</topic><topic>Cloning, Molecular</topic><topic>DNA Primers</topic><topic>expression</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>galactoslylceramidase</topic><topic>Galactosylceramidase - biosynthesis</topic><topic>Galactosylceramidase - genetics</topic><topic>Galactosylceramidase - metabolism</topic><topic>Gene Expression</topic><topic>Gene Library</topic><topic>genes</topic><topic>Genes. Genome</topic><topic>Kinetics</topic><topic>Krabbe's disease</topic><topic>leukodystrophy</topic><topic>Leukodystrophy, Globoid Cell - enzymology</topic><topic>Leukodystrophy, Globoid Cell - genetics</topic><topic>Male</topic><topic>man</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequence</topic><topic>Polymerase Chain Reaction</topic><topic>prediction</topic><topic>Recombinant Proteins - biosynthesis</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sequence Homology, Amino Acid</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Testis - enzymology</topic><topic>Transfection</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chen, Yue Qun</creatorcontrib><creatorcontrib>Rafi, Mohammad A.</creatorcontrib><creatorcontrib>de Gala, Gregory</creatorcontrib><creatorcontrib>Wenger, David A.</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Human Genome Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Human molecular genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chen, Yue Qun</au><au>Rafi, Mohammad A.</au><au>de Gala, Gregory</au><au>Wenger, David A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning and expression cDNA encoding human galactocerebrosidase, the enzyme deficient in globoid cell leukodystrophy</atitle><jtitle>Human molecular genetics</jtitle><addtitle>Hum Mol Genet</addtitle><date>1993-11-01</date><risdate>1993</risdate><volume>2</volume><issue>11</issue><spage>1841</spage><epage>1846</epage><pages>1841-1846</pages><issn>0964-6906</issn><eissn>1460-2083</eissn><abstract>Globold cell leukodystrophy (Krabbe disease) is an autosomal recessive disorder resulting from the deficiency of galactocerebrosidase (GALC) activity. GALC is responsible for the lysosomal catabollsm of galactosytceramide, a major llpid In myelln, kidney and epithelial cells of small intestine and colon. We describe the molecular cloning of human GALC cDNA and its expression in COS-1 cells. Degenerate PCR primers, derived from N-terminal amino acid sequence from the 51 KDa band from human brain, were used to amplify cat testes RNA, and the resulting product was used to screen human testes and brain libraries. Two overlapping clones contained the total protein coding region, while additional clones and PCR amplification were needed to obtain the complete 3' end of the cDNA. The 3795 bp obtained Include 47 bp 5' to the initiation start site, 2007 bp of open reading frame (coding for 669 amino acids), and 1741 bp of 3' untranslated sequence. Modification of the sequence surrounding the initiation codon to one more favorable for expression, resulted in a 6-fold increase in GALC activity in transfected COS-1 cells. The isolation of this clone will permit investigations into the causes for GALC deficiency in humans and available animal models, development of more accurate tests for patient and carrier identification, and evaluation of methods for effectively treating GALC deficiency, initially using the animal models.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>8281145</pmid><doi>10.1093/hmg/2.11.1841</doi><tpages>6</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Base Sequence Biological and medical sciences Brain - enzymology Cats cDNA Cell Line cloning Cloning, Molecular DNA Primers expression Fundamental and applied biological sciences. Psychology galactoslylceramidase Galactosylceramidase - biosynthesis Galactosylceramidase - genetics Galactosylceramidase - metabolism Gene Expression Gene Library genes Genes. Genome Kinetics Krabbe's disease leukodystrophy Leukodystrophy, Globoid Cell - enzymology Leukodystrophy, Globoid Cell - genetics Male man Molecular and cellular biology Molecular genetics Molecular Sequence Data nucleotide sequence Polymerase Chain Reaction prediction Recombinant Proteins - biosynthesis Recombinant Proteins - metabolism Sequence Homology, Amino Acid Sequence Homology, Nucleic Acid Testis - enzymology Transfection |
title | Cloning and expression cDNA encoding human galactocerebrosidase, the enzyme deficient in globoid cell leukodystrophy |
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