Human cystathionine β-synthase cDNA: sequence, alternative splicing and expression in cultured cells
Cystathionineβ-synthase (CBS) deficiency is the major cause of homocystinuria in humans. The most frequent symptoms of homocystinuria include: dislocated optic lenses, vascular disorders, skeletal abnormalities and mental retardation. Patients with this deficiency have elevated levels of homocyst(e)...
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Veröffentlicht in: | Human molecular genetics 1993-10, Vol.2 (10), p.1633-1638 |
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description | Cystathionineβ-synthase (CBS) deficiency is the major cause of homocystinuria in humans. The most frequent symptoms of homocystinuria include: dislocated optic lenses, vascular disorders, skeletal abnormalities and mental retardation. Patients with this deficiency have elevated levels of homocyst(e)ine, methionine and low cysteine in their body fluids. These abnormal levels often partially or fully normalize upon treatment with pharmacological doses of vitamin B6 To Investigate the molecular and biochemical basis for these conditions, It was necessary to determine the nucleotide and polypeptide sequence of CBS. We report here the human CBS cDNA sequence of 2,554 nucleotides encoding the CBS subunit of 551 amino acids. An intron of 214 bp appears to be retained in the 3′-untranslated region of most of the fibroblast and liver mRNA. We also report a frequent Mspl polymorphism in the 3′-untranslated sequence and two synonymous mutations in the coding region: 699C/T (Y233Y) and 1080C/T (A360A). The amino acid sequence similarity of human and rat CBS is greater than 90% the enzyme also exhibits 52% similarity to O-acetylserine(thiol)-lyase from bacteria and plants. Lastly, we demonstrate that expression of the human enzyme in CHO cells yields enzymatically active protein of the expected size with a half-life of ˜14hrs. |
doi_str_mv | 10.1093/hmg/2.10.1633 |
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The most frequent symptoms of homocystinuria include: dislocated optic lenses, vascular disorders, skeletal abnormalities and mental retardation. Patients with this deficiency have elevated levels of homocyst(e)ine, methionine and low cysteine in their body fluids. These abnormal levels often partially or fully normalize upon treatment with pharmacological doses of vitamin B6 To Investigate the molecular and biochemical basis for these conditions, It was necessary to determine the nucleotide and polypeptide sequence of CBS. We report here the human CBS cDNA sequence of 2,554 nucleotides encoding the CBS subunit of 551 amino acids. An intron of 214 bp appears to be retained in the 3′-untranslated region of most of the fibroblast and liver mRNA. We also report a frequent Mspl polymorphism in the 3′-untranslated sequence and two synonymous mutations in the coding region: 699C/T (Y233Y) and 1080C/T (A360A). The amino acid sequence similarity of human and rat CBS is greater than 90% the enzyme also exhibits 52% similarity to O-acetylserine(thiol)-lyase from bacteria and plants. Lastly, we demonstrate that expression of the human enzyme in CHO cells yields enzymatically active protein of the expected size with a half-life of ˜14hrs.</description><identifier>ISSN: 0964-6906</identifier><identifier>EISSN: 1460-2083</identifier><identifier>DOI: 10.1093/hmg/2.10.1633</identifier><identifier>PMID: 7903580</identifier><language>eng</language><publisher>Oxford: Oxford University Press</publisher><subject>Amino Acid Sequence ; Animals ; Base Sequence ; Biological and medical sciences ; cDNA ; cells ; Cells, Cultured ; CHO Cells ; Cricetinae ; cystathionine beta -synthase ; Cystathionine beta-Synthase - biosynthesis ; Cystathionine beta-Synthase - deficiency ; Cystathionine beta-Synthase - genetics ; DNA Mutational Analysis ; DNA, Complementary - genetics ; expression ; Female ; Fibroblasts - chemistry ; Fundamental and applied biological sciences. Psychology ; genes ; Genes. Genome ; homocystinuria ; Homocystinuria - genetics ; Humans ; Liver - chemistry ; Male ; man ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; mRNA ; mutation ; nucleotide sequence ; Organ Specificity ; Pedigree ; Polymorphism, Restriction Fragment Length ; predictions ; Rats - genetics ; Recombinant Fusion Proteins - biosynthesis ; RNA Splicing ; Sequence Alignment ; Sequence Homology, Amino Acid ; Skin - chemistry ; Species Specificity ; splicing</subject><ispartof>Human molecular genetics, 1993-10, Vol.2 (10), p.1633-1638</ispartof><rights>1993 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c386t-ebd552ddef9fdf1fc6815307d77d36bab5360d2e38dfa2c4af390507df4603ba3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=4934111$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/7903580$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kraus, Jan P.</creatorcontrib><creatorcontrib>Le, Kim</creatorcontrib><creatorcontrib>Swaroop, Manju</creatorcontrib><creatorcontrib>Ohura, Toshihiro</creatorcontrib><creatorcontrib>Tahara, Takahiro</creatorcontrib><creatorcontrib>Rosenberg, Leon E.</creatorcontrib><creatorcontrib>Roper, Michael D.</creatorcontrib><creatorcontrib>Kožlch, Viktor</creatorcontrib><title>Human cystathionine β-synthase cDNA: sequence, alternative splicing and expression in cultured cells</title><title>Human molecular genetics</title><addtitle>Hum Mol Genet</addtitle><description>Cystathionineβ-synthase (CBS) deficiency is the major cause of homocystinuria in humans. The most frequent symptoms of homocystinuria include: dislocated optic lenses, vascular disorders, skeletal abnormalities and mental retardation. Patients with this deficiency have elevated levels of homocyst(e)ine, methionine and low cysteine in their body fluids. These abnormal levels often partially or fully normalize upon treatment with pharmacological doses of vitamin B6 To Investigate the molecular and biochemical basis for these conditions, It was necessary to determine the nucleotide and polypeptide sequence of CBS. We report here the human CBS cDNA sequence of 2,554 nucleotides encoding the CBS subunit of 551 amino acids. An intron of 214 bp appears to be retained in the 3′-untranslated region of most of the fibroblast and liver mRNA. We also report a frequent Mspl polymorphism in the 3′-untranslated sequence and two synonymous mutations in the coding region: 699C/T (Y233Y) and 1080C/T (A360A). The amino acid sequence similarity of human and rat CBS is greater than 90% the enzyme also exhibits 52% similarity to O-acetylserine(thiol)-lyase from bacteria and plants. Lastly, we demonstrate that expression of the human enzyme in CHO cells yields enzymatically active protein of the expected size with a half-life of ˜14hrs.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>cDNA</subject><subject>cells</subject><subject>Cells, Cultured</subject><subject>CHO Cells</subject><subject>Cricetinae</subject><subject>cystathionine beta -synthase</subject><subject>Cystathionine beta-Synthase - biosynthesis</subject><subject>Cystathionine beta-Synthase - deficiency</subject><subject>Cystathionine beta-Synthase - genetics</subject><subject>DNA Mutational Analysis</subject><subject>DNA, Complementary - genetics</subject><subject>expression</subject><subject>Female</subject><subject>Fibroblasts - chemistry</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>Genes. Genome</subject><subject>homocystinuria</subject><subject>Homocystinuria - genetics</subject><subject>Humans</subject><subject>Liver - chemistry</subject><subject>Male</subject><subject>man</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>mRNA</subject><subject>mutation</subject><subject>nucleotide sequence</subject><subject>Organ Specificity</subject><subject>Pedigree</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>predictions</subject><subject>Rats - genetics</subject><subject>Recombinant Fusion Proteins - biosynthesis</subject><subject>RNA Splicing</subject><subject>Sequence Alignment</subject><subject>Sequence Homology, Amino Acid</subject><subject>Skin - chemistry</subject><subject>Species Specificity</subject><subject>splicing</subject><issn>0964-6906</issn><issn>1460-2083</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1993</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkEFv1DAQhS0EKkvhyBHJB8Spae04cWJuVSksUlkuICIulmOPu4bEu3gS1P1b_BB-E166Wo6cRk_v05uZR8hzzs45U-JiPd5elOd7JYV4QBa8kqwoWSsekgVTsiqkYvIxeYL4jTEuK9GckJNGMVG3bEFgOY8mUrvDyUzrsIkhAv39q8BdnNYGgdo3q8vXFOHHDNHCGTXDBCmaKfwEitsh2BBvqYmOwt02AWKOoCEHzsM0J3DUwjDgU_LImwHh2WGeks9vrz9dLYubj-_eX13eFFa0ciqgd3VdOgdeeee5t7LltWCNaxonZG_6WkjmShCt86a0lfFCsTr7Pv8seiNOyav73G3a5INx0mPA_QUmwmZG3UguGlVW_wW5zKurUmWwuAdt2iAm8HqbwmjSTnOm9_3r3L8u_6rcf-ZfHILnfgR3pA-FZ__lwTdozeCTiTbgEauUqDjn_9YGnODuaJv0XctGNLVedl91133outUXpVfiD8fnn6k</recordid><startdate>19931001</startdate><enddate>19931001</enddate><creator>Kraus, Jan P.</creator><creator>Le, Kim</creator><creator>Swaroop, Manju</creator><creator>Ohura, Toshihiro</creator><creator>Tahara, Takahiro</creator><creator>Rosenberg, Leon E.</creator><creator>Roper, Michael D.</creator><creator>Kožlch, Viktor</creator><general>Oxford University Press</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T3</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19931001</creationdate><title>Human cystathionine β-synthase cDNA: sequence, alternative splicing and expression in cultured cells</title><author>Kraus, Jan P. ; Le, Kim ; Swaroop, Manju ; Ohura, Toshihiro ; Tahara, Takahiro ; Rosenberg, Leon E. ; Roper, Michael D. ; Kožlch, Viktor</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c386t-ebd552ddef9fdf1fc6815307d77d36bab5360d2e38dfa2c4af390507df4603ba3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1993</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>cDNA</topic><topic>cells</topic><topic>Cells, Cultured</topic><topic>CHO Cells</topic><topic>Cricetinae</topic><topic>cystathionine beta -synthase</topic><topic>Cystathionine beta-Synthase - biosynthesis</topic><topic>Cystathionine beta-Synthase - deficiency</topic><topic>Cystathionine beta-Synthase - genetics</topic><topic>DNA Mutational Analysis</topic><topic>DNA, Complementary - genetics</topic><topic>expression</topic><topic>Female</topic><topic>Fibroblasts - chemistry</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genes</topic><topic>Genes. Genome</topic><topic>homocystinuria</topic><topic>Homocystinuria - genetics</topic><topic>Humans</topic><topic>Liver - chemistry</topic><topic>Male</topic><topic>man</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>mRNA</topic><topic>mutation</topic><topic>nucleotide sequence</topic><topic>Organ Specificity</topic><topic>Pedigree</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>predictions</topic><topic>Rats - genetics</topic><topic>Recombinant Fusion Proteins - biosynthesis</topic><topic>RNA Splicing</topic><topic>Sequence Alignment</topic><topic>Sequence Homology, Amino Acid</topic><topic>Skin - chemistry</topic><topic>Species Specificity</topic><topic>splicing</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kraus, Jan P.</creatorcontrib><creatorcontrib>Le, Kim</creatorcontrib><creatorcontrib>Swaroop, Manju</creatorcontrib><creatorcontrib>Ohura, Toshihiro</creatorcontrib><creatorcontrib>Tahara, Takahiro</creatorcontrib><creatorcontrib>Rosenberg, Leon E.</creatorcontrib><creatorcontrib>Roper, Michael D.</creatorcontrib><creatorcontrib>Kožlch, Viktor</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Human Genome Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Human molecular genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kraus, Jan P.</au><au>Le, Kim</au><au>Swaroop, Manju</au><au>Ohura, Toshihiro</au><au>Tahara, Takahiro</au><au>Rosenberg, Leon E.</au><au>Roper, Michael D.</au><au>Kožlch, Viktor</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Human cystathionine β-synthase cDNA: sequence, alternative splicing and expression in cultured cells</atitle><jtitle>Human molecular genetics</jtitle><addtitle>Hum Mol Genet</addtitle><date>1993-10-01</date><risdate>1993</risdate><volume>2</volume><issue>10</issue><spage>1633</spage><epage>1638</epage><pages>1633-1638</pages><issn>0964-6906</issn><eissn>1460-2083</eissn><abstract>Cystathionineβ-synthase (CBS) deficiency is the major cause of homocystinuria in humans. The most frequent symptoms of homocystinuria include: dislocated optic lenses, vascular disorders, skeletal abnormalities and mental retardation. Patients with this deficiency have elevated levels of homocyst(e)ine, methionine and low cysteine in their body fluids. These abnormal levels often partially or fully normalize upon treatment with pharmacological doses of vitamin B6 To Investigate the molecular and biochemical basis for these conditions, It was necessary to determine the nucleotide and polypeptide sequence of CBS. We report here the human CBS cDNA sequence of 2,554 nucleotides encoding the CBS subunit of 551 amino acids. An intron of 214 bp appears to be retained in the 3′-untranslated region of most of the fibroblast and liver mRNA. We also report a frequent Mspl polymorphism in the 3′-untranslated sequence and two synonymous mutations in the coding region: 699C/T (Y233Y) and 1080C/T (A360A). The amino acid sequence similarity of human and rat CBS is greater than 90% the enzyme also exhibits 52% similarity to O-acetylserine(thiol)-lyase from bacteria and plants. Lastly, we demonstrate that expression of the human enzyme in CHO cells yields enzymatically active protein of the expected size with a half-life of ˜14hrs.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>7903580</pmid><doi>10.1093/hmg/2.10.1633</doi><tpages>6</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Base Sequence Biological and medical sciences cDNA cells Cells, Cultured CHO Cells Cricetinae cystathionine beta -synthase Cystathionine beta-Synthase - biosynthesis Cystathionine beta-Synthase - deficiency Cystathionine beta-Synthase - genetics DNA Mutational Analysis DNA, Complementary - genetics expression Female Fibroblasts - chemistry Fundamental and applied biological sciences. Psychology genes Genes. Genome homocystinuria Homocystinuria - genetics Humans Liver - chemistry Male man Molecular and cellular biology Molecular genetics Molecular Sequence Data mRNA mutation nucleotide sequence Organ Specificity Pedigree Polymorphism, Restriction Fragment Length predictions Rats - genetics Recombinant Fusion Proteins - biosynthesis RNA Splicing Sequence Alignment Sequence Homology, Amino Acid Skin - chemistry Species Specificity splicing |
title | Human cystathionine β-synthase cDNA: sequence, alternative splicing and expression in cultured cells |
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