The l‐lactate dehydrogenase gene of the hyperthermophilic bacterium Thermotoga maritima cloned by complementation in Escherichia coli
The gene for a l(+)‐lactate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima was cloned by complementation of an Escherichia coli pfl. ldh mutant. The gene is part of a 4.5 kb SauIIIA fragment obtained by partial digestion of the Thermotoga genome. The DNA fragment was physical...
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Veröffentlicht in: | European journal of biochemistry 1993-09, Vol.216 (3), p.709-715 |
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description | The gene for a l(+)‐lactate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima was cloned by complementation of an Escherichia coli pfl. ldh mutant. The gene is part of a 4.5 kb SauIIIA fragment obtained by partial digestion of the Thermotoga genome. The DNA fragment was physically mapped and the putative Shine‐Dalgarno sequence within the non‐coding region determined. The gene contains 960 bp, including the stop codon, corresponding to 319 amino acids/subunit of the homotetrameric enzyme.
Part of the amino acid sequence was confirmed by Edman degradation of peptides obtained from nanomolar quantities of the purified enzyme by tryptic digestion. A comparison of the amino acid sequenc̀e with those of known prokaryotic l‐lactate dehydrogenases reveals a high similarity, especially with the enzyme from thermophilic sources, where up to 48% identity is found.
The gene was expressed as an active enzyme in a heterologous host. |
doi_str_mv | 10.1111/j.1432-1033.1993.tb18190.x |
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Part of the amino acid sequence was confirmed by Edman degradation of peptides obtained from nanomolar quantities of the purified enzyme by tryptic digestion. A comparison of the amino acid sequenc̀e with those of known prokaryotic l‐lactate dehydrogenases reveals a high similarity, especially with the enzyme from thermophilic sources, where up to 48% identity is found.
The gene was expressed as an active enzyme in a heterologous host.</description><identifier>ISSN: 0014-2956</identifier><identifier>EISSN: 1432-1033</identifier><identifier>DOI: 10.1111/j.1432-1033.1993.tb18190.x</identifier><identifier>PMID: 8404889</identifier><identifier>CODEN: EJBCAI</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Amino Acid Sequence ; Animals ; Bacteriology ; Base Sequence ; Biological and medical sciences ; Cloning, Molecular ; DNA, Bacterial ; Escherichia coli - genetics ; Fundamental and applied biological sciences. Psychology ; Genetic Complementation Test ; Genetics ; Gram-Negative Anaerobic Bacteria - enzymology ; Gram-Negative Anaerobic Bacteria - genetics ; L-Lactate Dehydrogenase - chemistry ; L-Lactate Dehydrogenase - genetics ; Metabolism. Enzymes ; Microbiology ; Molecular Sequence Data ; Protein Structure, Tertiary ; Sequence Alignment ; Thermotoga maritima</subject><ispartof>European journal of biochemistry, 1993-09, Vol.216 (3), p.709-715</ispartof><rights>1994 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4829-9a2de8c384dc695632541ffb1b9b83f811d7fbc6fb5cb3cbf6d67f5191ea2fe3</citedby><cites>FETCH-LOGICAL-c4829-9a2de8c384dc695632541ffb1b9b83f811d7fbc6fb5cb3cbf6d67f5191ea2fe3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,781,785,27928,27929</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=3765712$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8404889$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>OSTENDORP, Ralf</creatorcontrib><creatorcontrib>LIEBL, Wolfgang</creatorcontrib><creatorcontrib>SCHURIG, Hartmut</creatorcontrib><creatorcontrib>JAENICKE, Rainer</creatorcontrib><title>The l‐lactate dehydrogenase gene of the hyperthermophilic bacterium Thermotoga maritima cloned by complementation in Escherichia coli</title><title>European journal of biochemistry</title><addtitle>Eur J Biochem</addtitle><description>The gene for a l(+)‐lactate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima was cloned by complementation of an Escherichia coli pfl. ldh mutant. The gene is part of a 4.5 kb SauIIIA fragment obtained by partial digestion of the Thermotoga genome. The DNA fragment was physically mapped and the putative Shine‐Dalgarno sequence within the non‐coding region determined. The gene contains 960 bp, including the stop codon, corresponding to 319 amino acids/subunit of the homotetrameric enzyme.
Part of the amino acid sequence was confirmed by Edman degradation of peptides obtained from nanomolar quantities of the purified enzyme by tryptic digestion. A comparison of the amino acid sequenc̀e with those of known prokaryotic l‐lactate dehydrogenases reveals a high similarity, especially with the enzyme from thermophilic sources, where up to 48% identity is found.
The gene was expressed as an active enzyme in a heterologous host.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Bacteriology</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Cloning, Molecular</subject><subject>DNA, Bacterial</subject><subject>Escherichia coli - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetic Complementation Test</subject><subject>Genetics</subject><subject>Gram-Negative Anaerobic Bacteria - enzymology</subject><subject>Gram-Negative Anaerobic Bacteria - genetics</subject><subject>L-Lactate Dehydrogenase - chemistry</subject><subject>L-Lactate Dehydrogenase - genetics</subject><subject>Metabolism. Enzymes</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Protein Structure, Tertiary</subject><subject>Sequence Alignment</subject><subject>Thermotoga maritima</subject><issn>0014-2956</issn><issn>1432-1033</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1993</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqVkc2OFCEUhYnRjG3rI5gQY9xVCUX9gBujkx41mcSFvSdAXaboUEUL1ZmpnTu3PqNPIm13emtkcwnnO1wuB6FXlJQ0r7e7ktasKihhrKRCsHLWlFNByodHaHWRHqMVIbQuKtG0T9GzlHaEkFa03RW64jWpORcr9HM7APa_f_zyysxqBtzDsPQx3MGkEuBcAAeL50wNyx5i3sQx7AfnncE6eyC6w4i3f4_ncKfwqKKb3aiw8WGCHusFmzDuPYww5Q4uTNhNeJNMtjgzuAwG756jJ1b5BC_OdY22N5vt9efi9uunL9cfbgtT80oUQlU9cMN43Zs2z8WqpqbWaqqF5sxySvvOatNa3RjNjLZt33a2oYKCqiywNXpzunYfw_cDpFmOLhnwXk0QDkl2jeAdb9g_Qdp2tejyX6_RuxNoYkgpgpX7mKePi6REHtOSO3mMRB4jkce05Dkt-ZDNL89dDnqE_mI9x5P112ddJaO8jWoyLl0w1rVNR6uMvT9h987D8h8PkDebj986ItgfQlu2lQ</recordid><startdate>19930915</startdate><enddate>19930915</enddate><creator>OSTENDORP, Ralf</creator><creator>LIEBL, Wolfgang</creator><creator>SCHURIG, Hartmut</creator><creator>JAENICKE, Rainer</creator><general>Blackwell Publishing Ltd</general><general>Blackwell</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19930915</creationdate><title>The l‐lactate dehydrogenase gene of the hyperthermophilic bacterium Thermotoga maritima cloned by complementation in Escherichia coli</title><author>OSTENDORP, Ralf ; LIEBL, Wolfgang ; SCHURIG, Hartmut ; JAENICKE, Rainer</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4829-9a2de8c384dc695632541ffb1b9b83f811d7fbc6fb5cb3cbf6d67f5191ea2fe3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1993</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Bacteriology</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Cloning, Molecular</topic><topic>DNA, Bacterial</topic><topic>Escherichia coli - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetic Complementation Test</topic><topic>Genetics</topic><topic>Gram-Negative Anaerobic Bacteria - enzymology</topic><topic>Gram-Negative Anaerobic Bacteria - genetics</topic><topic>L-Lactate Dehydrogenase - chemistry</topic><topic>L-Lactate Dehydrogenase - genetics</topic><topic>Metabolism. Enzymes</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Protein Structure, Tertiary</topic><topic>Sequence Alignment</topic><topic>Thermotoga maritima</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>OSTENDORP, Ralf</creatorcontrib><creatorcontrib>LIEBL, Wolfgang</creatorcontrib><creatorcontrib>SCHURIG, Hartmut</creatorcontrib><creatorcontrib>JAENICKE, Rainer</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>European journal of biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>OSTENDORP, Ralf</au><au>LIEBL, Wolfgang</au><au>SCHURIG, Hartmut</au><au>JAENICKE, Rainer</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The l‐lactate dehydrogenase gene of the hyperthermophilic bacterium Thermotoga maritima cloned by complementation in Escherichia coli</atitle><jtitle>European journal of biochemistry</jtitle><addtitle>Eur J Biochem</addtitle><date>1993-09-15</date><risdate>1993</risdate><volume>216</volume><issue>3</issue><spage>709</spage><epage>715</epage><pages>709-715</pages><issn>0014-2956</issn><eissn>1432-1033</eissn><coden>EJBCAI</coden><abstract>The gene for a l(+)‐lactate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima was cloned by complementation of an Escherichia coli pfl. ldh mutant. The gene is part of a 4.5 kb SauIIIA fragment obtained by partial digestion of the Thermotoga genome. The DNA fragment was physically mapped and the putative Shine‐Dalgarno sequence within the non‐coding region determined. The gene contains 960 bp, including the stop codon, corresponding to 319 amino acids/subunit of the homotetrameric enzyme.
Part of the amino acid sequence was confirmed by Edman degradation of peptides obtained from nanomolar quantities of the purified enzyme by tryptic digestion. A comparison of the amino acid sequenc̀e with those of known prokaryotic l‐lactate dehydrogenases reveals a high similarity, especially with the enzyme from thermophilic sources, where up to 48% identity is found.
The gene was expressed as an active enzyme in a heterologous host.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>8404889</pmid><doi>10.1111/j.1432-1033.1993.tb18190.x</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Animals Bacteriology Base Sequence Biological and medical sciences Cloning, Molecular DNA, Bacterial Escherichia coli - genetics Fundamental and applied biological sciences. Psychology Genetic Complementation Test Genetics Gram-Negative Anaerobic Bacteria - enzymology Gram-Negative Anaerobic Bacteria - genetics L-Lactate Dehydrogenase - chemistry L-Lactate Dehydrogenase - genetics Metabolism. Enzymes Microbiology Molecular Sequence Data Protein Structure, Tertiary Sequence Alignment Thermotoga maritima |
title | The l‐lactate dehydrogenase gene of the hyperthermophilic bacterium Thermotoga maritima cloned by complementation in Escherichia coli |
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