[35] Cross-species polymerase chain reaction: Cloning of TATA box-binding proteins

This chapter discusses an application of the polymerase chain reaction (PCR) to isolate the genomic or complementary DNA (cDNA) fragments of a gene from one species, given that the polypeptide or DNA sequence of the gene from a second species is known. The PCR technique is extremely sensitive, which...

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Veröffentlicht in:Methods in Enzymology 1993, Vol.218, p.493-507
Hauptverfasser: Peterson, Michael Gregory, Dian, Robert
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description This chapter discusses an application of the polymerase chain reaction (PCR) to isolate the genomic or complementary DNA (cDNA) fragments of a gene from one species, given that the polypeptide or DNA sequence of the gene from a second species is known. The PCR technique is extremely sensitive, which means that the utmost care must be taken to avoid cross-contamination of samples, especially from micropipetting equipment. Physically separating work areas and equipment used for setting up the reactions and the subsequent analysis of the PCR products is perhaps the best way to avoid cross-contamination. The complete sequence of Drosophila and human t-butylbicyclophosphorothionates (TBPs) is analyzed in this chapter. This analysis shows that of the 10 regions of the yeast amino acid sequence chosen for designing PCR primers, three show perfect identities between the two species and other three show one amino acid sequence difference between the two species.
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subjects Amino Acid Sequence
Animals
Base Sequence
Cloning, Molecular - methods
DNA
DNA-Binding Proteins - genetics
DNA-Binding Proteins - metabolism
DNA-Directed DNA Polymerase
Drosophila melanogaster - genetics
Drosophila melanogaster - metabolism
Escherichia coli - genetics
HeLa Cells
Humans
Indicators and Reagents
Molecular Sequence Data
Oligodeoxyribonucleotides
Polymerase Chain Reaction - methods
Saccharomyces cerevisiae - genetics
Saccharomyces cerevisiae - metabolism
Species Specificity
Taq Polymerase
TATA Box
TATA-Box Binding Protein
Transcription Factors - genetics
Transcription Factors - metabolism
Transcription Factors, TFIII
title [35] Cross-species polymerase chain reaction: Cloning of TATA box-binding proteins
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