Assembly of the Bacteriophage T4 Replication Machine Requires the Acidic Carboxy Terminus of Gene 32 Protein
The acidic carboxy-terminal 89-amino acid fragment of bacteriophage T4 gene 32 protein was expressed in Escherichia coli to high levels from an inducible plasmid construct. Infection of induced cells by wild-type T4 phage results in impaired phage DNA synthesis. The time at which DNA synthesis begin...
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Veröffentlicht in: | Journal of molecular biology 1993-01, Vol.229 (2), p.398-418 |
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description | The acidic carboxy-terminal 89-amino acid fragment of bacteriophage T4 gene 32 protein was expressed in Escherichia coli to high levels from an inducible plasmid construct. Infection of induced cells by wild-type T4 phage results in impaired phage DNA synthesis. The time at which DNA synthesis begins and the diminution in DNA synthesis rates correlate with the amount of carboxy-terminal peptide that accumulates intracellularly prior to infection. Correspondingly, when induced cells are induced cells are infected with viable phage containing a small deletion near the carboxy-terminus of 32 protein (ΔPR201), the inhibition of phage DNA synthesis was much more severe. The mutant 32 protein competes less well against overproduced wild-type acid peptide than does wild-type 32 protein. The purified acid peptide, when used as the attached ligand for affinity chromatography, binds several T4 proteins from phage-infected cells, including 43 protein (T4 DNA polymerase), Dda protein (a DNA helicase), and UvsX protein (a Rec-like recombination protein). Furthermore, at 50- to 100-fold molar excess of acid peptide over intact 32 protein, phage DNA synthesis was specifically inhibited at the initiation step in an in vitro 5-protein DNA replication experiment. We propose that one or more phage replication proteins are titrated as non-productive protein-protein complexes at a site away from the DNA template. This implies that the carboxy-terminal domain of 32 protein is involved in an obligate step of replication machine assembly when the protein is properly attached to ssDNA in the vicinity of a primer-template junction. The assembly defect we observe is strikingly similar to the repression, or "squelching", of the activity of certain eukaryotic transcriptional activators. |
doi_str_mv | 10.1006/jmbi.1993.1042 |
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Infection of induced cells by wild-type T4 phage results in impaired phage DNA synthesis. The time at which DNA synthesis begins and the diminution in DNA synthesis rates correlate with the amount of carboxy-terminal peptide that accumulates intracellularly prior to infection. Correspondingly, when induced cells are induced cells are infected with viable phage containing a small deletion near the carboxy-terminus of 32 protein (ΔPR201), the inhibition of phage DNA synthesis was much more severe. The mutant 32 protein competes less well against overproduced wild-type acid peptide than does wild-type 32 protein. The purified acid peptide, when used as the attached ligand for affinity chromatography, binds several T4 proteins from phage-infected cells, including 43 protein (T4 DNA polymerase), Dda protein (a DNA helicase), and UvsX protein (a Rec-like recombination protein). Furthermore, at 50- to 100-fold molar excess of acid peptide over intact 32 protein, phage DNA synthesis was specifically inhibited at the initiation step in an in vitro 5-protein DNA replication experiment. We propose that one or more phage replication proteins are titrated as non-productive protein-protein complexes at a site away from the DNA template. This implies that the carboxy-terminal domain of 32 protein is involved in an obligate step of replication machine assembly when the protein is properly attached to ssDNA in the vicinity of a primer-template junction. The assembly defect we observe is strikingly similar to the repression, or "squelching", of the activity of certain eukaryotic transcriptional activators.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1006/jmbi.1993.1042</identifier><identifier>PMID: 8429554</identifier><identifier>CODEN: JMOBAK</identifier><language>eng</language><publisher>Oxford: Elsevier Ltd</publisher><subject>Amino Acid Sequence ; Bacteriophage T4 - genetics ; Bacteriophage T4 - physiology ; Base Sequence ; Biological and medical sciences ; Chromatography, Affinity ; DNA replication ; DNA Replication - genetics ; DNA, Viral - biosynthesis ; DNA-Binding Proteins - genetics ; Electrophoresis, Polyacrylamide Gel ; Fundamental and applied biological sciences. Psychology ; Genetics ; Microbiology ; Molecular Sequence Data ; phage T4 ; Polymerase Chain Reaction ; Protein Binding ; protein-protein interactions ; squelching ; ssDNA binding protein ; Viral Proteins - genetics ; Virology</subject><ispartof>Journal of molecular biology, 1993-01, Vol.229 (2), p.398-418</ispartof><rights>1993 Academic Press</rights><rights>1993 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c465t-6a0f7cc111e84c8407c84bc703e08a3aad50355fede063290a95f113f50e00843</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1006/jmbi.1993.1042$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=4638456$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8429554$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hurley, J.Michael</creatorcontrib><creatorcontrib>Chervitz, Stephen A.</creatorcontrib><creatorcontrib>Jarvis, Thale C.</creatorcontrib><creatorcontrib>Singer, Britta S.</creatorcontrib><creatorcontrib>Gold, Larry</creatorcontrib><title>Assembly of the Bacteriophage T4 Replication Machine Requires the Acidic Carboxy Terminus of Gene 32 Protein</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>The acidic carboxy-terminal 89-amino acid fragment of bacteriophage T4 gene 32 protein was expressed in Escherichia coli to high levels from an inducible plasmid construct. Infection of induced cells by wild-type T4 phage results in impaired phage DNA synthesis. The time at which DNA synthesis begins and the diminution in DNA synthesis rates correlate with the amount of carboxy-terminal peptide that accumulates intracellularly prior to infection. Correspondingly, when induced cells are induced cells are infected with viable phage containing a small deletion near the carboxy-terminus of 32 protein (ΔPR201), the inhibition of phage DNA synthesis was much more severe. The mutant 32 protein competes less well against overproduced wild-type acid peptide than does wild-type 32 protein. The purified acid peptide, when used as the attached ligand for affinity chromatography, binds several T4 proteins from phage-infected cells, including 43 protein (T4 DNA polymerase), Dda protein (a DNA helicase), and UvsX protein (a Rec-like recombination protein). Furthermore, at 50- to 100-fold molar excess of acid peptide over intact 32 protein, phage DNA synthesis was specifically inhibited at the initiation step in an in vitro 5-protein DNA replication experiment. We propose that one or more phage replication proteins are titrated as non-productive protein-protein complexes at a site away from the DNA template. This implies that the carboxy-terminal domain of 32 protein is involved in an obligate step of replication machine assembly when the protein is properly attached to ssDNA in the vicinity of a primer-template junction. The assembly defect we observe is strikingly similar to the repression, or "squelching", of the activity of certain eukaryotic transcriptional activators.</description><subject>Amino Acid Sequence</subject><subject>Bacteriophage T4 - genetics</subject><subject>Bacteriophage T4 - physiology</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Chromatography, Affinity</subject><subject>DNA replication</subject><subject>DNA Replication - genetics</subject><subject>DNA, Viral - biosynthesis</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetics</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>phage T4</subject><subject>Polymerase Chain Reaction</subject><subject>Protein Binding</subject><subject>protein-protein interactions</subject><subject>squelching</subject><subject>ssDNA binding protein</subject><subject>Viral Proteins - genetics</subject><subject>Virology</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1993</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcFv2yAYxdHUqsvaXXubxKHqzemHARsfs6jrJnVqVWVnhPHnhso2KdjT8t8XL1Fv0y4g-H7vgd4j5JLBkgEUNy997Zasqng6ivwDWTBQVaYKrk7IAiDPs1zx4iP5FOMLAEgu1Bk5UyKvpBQL0q1ixL7u9tS3dNwi_WrsiMH53dY8I90I-oS7zlkzOj_Qn8Zu3YDp7nVyAeNfxcq6xlm6NqH2f_Z0g6F3wxRnwztMMM_pY_AjuuGCnLami_j5uJ-TX99uN-vv2f3D3Y_16j6zopBjVhhoS2sZY6iEVQLKtNS2BI6gDDemkcClbLFBKHhegalkyxhvJSCAEvycXB98d8G_ThhH3btosevMgH6KupSySjL5X5AVouSSFQlcHkAbfIwBW70LrjdhrxnouQc996DnHvTcQxJ8OTpPdY_NO34MPs2vjnMTrenaYAbr4jsmUn9Czu-qA4Yprt8Og47W4WCxSfHbUTfe_esHb6uCong</recordid><startdate>19930120</startdate><enddate>19930120</enddate><creator>Hurley, J.Michael</creator><creator>Chervitz, Stephen A.</creator><creator>Jarvis, Thale C.</creator><creator>Singer, Britta S.</creator><creator>Gold, Larry</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7U9</scope><scope>H94</scope><scope>7X8</scope></search><sort><creationdate>19930120</creationdate><title>Assembly of the Bacteriophage T4 Replication Machine Requires the Acidic Carboxy Terminus of Gene 32 Protein</title><author>Hurley, J.Michael ; Chervitz, Stephen A. ; Jarvis, Thale C. ; Singer, Britta S. ; Gold, Larry</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c465t-6a0f7cc111e84c8407c84bc703e08a3aad50355fede063290a95f113f50e00843</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1993</creationdate><topic>Amino Acid Sequence</topic><topic>Bacteriophage T4 - genetics</topic><topic>Bacteriophage T4 - physiology</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Chromatography, Affinity</topic><topic>DNA replication</topic><topic>DNA Replication - genetics</topic><topic>DNA, Viral - biosynthesis</topic><topic>DNA-Binding Proteins - genetics</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetics</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>phage T4</topic><topic>Polymerase Chain Reaction</topic><topic>Protein Binding</topic><topic>protein-protein interactions</topic><topic>squelching</topic><topic>ssDNA binding protein</topic><topic>Viral Proteins - genetics</topic><topic>Virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hurley, J.Michael</creatorcontrib><creatorcontrib>Chervitz, Stephen A.</creatorcontrib><creatorcontrib>Jarvis, Thale C.</creatorcontrib><creatorcontrib>Singer, Britta S.</creatorcontrib><creatorcontrib>Gold, Larry</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hurley, J.Michael</au><au>Chervitz, Stephen A.</au><au>Jarvis, Thale C.</au><au>Singer, Britta S.</au><au>Gold, Larry</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assembly of the Bacteriophage T4 Replication Machine Requires the Acidic Carboxy Terminus of Gene 32 Protein</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>1993-01-20</date><risdate>1993</risdate><volume>229</volume><issue>2</issue><spage>398</spage><epage>418</epage><pages>398-418</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><coden>JMOBAK</coden><abstract>The acidic carboxy-terminal 89-amino acid fragment of bacteriophage T4 gene 32 protein was expressed in Escherichia coli to high levels from an inducible plasmid construct. Infection of induced cells by wild-type T4 phage results in impaired phage DNA synthesis. The time at which DNA synthesis begins and the diminution in DNA synthesis rates correlate with the amount of carboxy-terminal peptide that accumulates intracellularly prior to infection. Correspondingly, when induced cells are induced cells are infected with viable phage containing a small deletion near the carboxy-terminus of 32 protein (ΔPR201), the inhibition of phage DNA synthesis was much more severe. The mutant 32 protein competes less well against overproduced wild-type acid peptide than does wild-type 32 protein. The purified acid peptide, when used as the attached ligand for affinity chromatography, binds several T4 proteins from phage-infected cells, including 43 protein (T4 DNA polymerase), Dda protein (a DNA helicase), and UvsX protein (a Rec-like recombination protein). Furthermore, at 50- to 100-fold molar excess of acid peptide over intact 32 protein, phage DNA synthesis was specifically inhibited at the initiation step in an in vitro 5-protein DNA replication experiment. We propose that one or more phage replication proteins are titrated as non-productive protein-protein complexes at a site away from the DNA template. This implies that the carboxy-terminal domain of 32 protein is involved in an obligate step of replication machine assembly when the protein is properly attached to ssDNA in the vicinity of a primer-template junction. The assembly defect we observe is strikingly similar to the repression, or "squelching", of the activity of certain eukaryotic transcriptional activators.</abstract><cop>Oxford</cop><pub>Elsevier Ltd</pub><pmid>8429554</pmid><doi>10.1006/jmbi.1993.1042</doi><tpages>21</tpages></addata></record> |
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subjects | Amino Acid Sequence Bacteriophage T4 - genetics Bacteriophage T4 - physiology Base Sequence Biological and medical sciences Chromatography, Affinity DNA replication DNA Replication - genetics DNA, Viral - biosynthesis DNA-Binding Proteins - genetics Electrophoresis, Polyacrylamide Gel Fundamental and applied biological sciences. Psychology Genetics Microbiology Molecular Sequence Data phage T4 Polymerase Chain Reaction Protein Binding protein-protein interactions squelching ssDNA binding protein Viral Proteins - genetics Virology |
title | Assembly of the Bacteriophage T4 Replication Machine Requires the Acidic Carboxy Terminus of Gene 32 Protein |
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