Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803
The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a...
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description | The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a predicted polypeptide that has a sequence similar to that of a conserved region of animal microsomal heme oxygenases was identified in the published genomic sequence of Synechocystis sp. PCC 6803. This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium. |
doi_str_mv | 10.1046/j.1365-313x.1998.00186.x |
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PCC 6803</title><source>Wiley Free Content</source><source>MEDLINE</source><source>IngentaConnect Free/Open Access Journals</source><source>Wiley Online Library Journals Frontfile Complete</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><creator>Cornejo, J ; Willows, R.D ; Beale, S.I</creator><creatorcontrib>Cornejo, J ; Willows, R.D ; Beale, S.I</creatorcontrib><description>The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a predicted polypeptide that has a sequence similar to that of a conserved region of animal microsomal heme oxygenases was identified in the published genomic sequence of Synechocystis sp. PCC 6803. This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium.</description><identifier>ISSN: 0960-7412</identifier><identifier>EISSN: 1365-313X</identifier><identifier>DOI: 10.1046/j.1365-313x.1998.00186.x</identifier><identifier>PMID: 9744099</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Science, Ltd</publisher><subject>amino acid sequences ; Bacterial Proteins - biosynthesis ; Bacteriology ; biliverdin ; Biliverdine - biosynthesis ; Biological and medical sciences ; cell suspension culture ; Cloning, Molecular ; color ; culture media ; Cyanobacteria ; Cyanobacteria - enzymology ; Cyanobacteria - genetics ; enzyme activity ; Escherichia coli ; Escherichia coli - genetics ; Ferredoxins ; Freshwater ; Fundamental and applied biological sciences. Psychology ; gene expression ; Gene Expression Regulation, Bacterial - physiology ; genes ; Genes, Bacterial - genetics ; genome ; heme ; heme oxygenase (decyclizing) ; Heme Oxygenase (Decyclizing) - chemistry ; Heme Oxygenase (Decyclizing) - genetics ; Heme Oxygenase (Decyclizing) - metabolism ; Hemin ; heterocyclic nitrogen compounds ; iron ; Light-Harvesting Protein Complexes ; Metabolism. Enzymes ; Microbiology ; Molecular Weight ; nucleotide sequences ; nutrient deficiencies ; open reading frames ; Plant Proteins - biosynthesis ; promoter regions ; RNA, Bacterial - analysis ; RNA, Messenger - analysis ; Synechocystis ; trace element deficiencies</subject><ispartof>The Plant journal : for cell and molecular biology, 1998-07, Vol.15 (1), p.99-107</ispartof><rights>1998 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c6186-b8febeca8c8046f7cdde267ef06dd430856bc1cafa63443460e5fa9c8171df073</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1046%2Fj.1365-313X.1998.00186.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1046%2Fj.1365-313X.1998.00186.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,1427,27901,27902,45550,45551,46384,46808</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=2360775$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9744099$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cornejo, J</creatorcontrib><creatorcontrib>Willows, R.D</creatorcontrib><creatorcontrib>Beale, S.I</creatorcontrib><title>Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803</title><title>The Plant journal : for cell and molecular biology</title><addtitle>Plant J</addtitle><description>The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a predicted polypeptide that has a sequence similar to that of a conserved region of animal microsomal heme oxygenases was identified in the published genomic sequence of Synechocystis sp. PCC 6803. This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium.</description><subject>amino acid sequences</subject><subject>Bacterial Proteins - biosynthesis</subject><subject>Bacteriology</subject><subject>biliverdin</subject><subject>Biliverdine - biosynthesis</subject><subject>Biological and medical sciences</subject><subject>cell suspension culture</subject><subject>Cloning, Molecular</subject><subject>color</subject><subject>culture media</subject><subject>Cyanobacteria</subject><subject>Cyanobacteria - enzymology</subject><subject>Cyanobacteria - genetics</subject><subject>enzyme activity</subject><subject>Escherichia coli</subject><subject>Escherichia coli - genetics</subject><subject>Ferredoxins</subject><subject>Freshwater</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gene expression</subject><subject>Gene Expression Regulation, Bacterial - physiology</subject><subject>genes</subject><subject>Genes, Bacterial - genetics</subject><subject>genome</subject><subject>heme</subject><subject>heme oxygenase (decyclizing)</subject><subject>Heme Oxygenase (Decyclizing) - chemistry</subject><subject>Heme Oxygenase (Decyclizing) - genetics</subject><subject>Heme Oxygenase (Decyclizing) - metabolism</subject><subject>Hemin</subject><subject>heterocyclic nitrogen compounds</subject><subject>iron</subject><subject>Light-Harvesting Protein Complexes</subject><subject>Metabolism. Enzymes</subject><subject>Microbiology</subject><subject>Molecular Weight</subject><subject>nucleotide sequences</subject><subject>nutrient deficiencies</subject><subject>open reading frames</subject><subject>Plant Proteins - biosynthesis</subject><subject>promoter regions</subject><subject>RNA, Bacterial - analysis</subject><subject>RNA, Messenger - analysis</subject><subject>Synechocystis</subject><subject>trace element deficiencies</subject><issn>0960-7412</issn><issn>1365-313X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkV2PEyEUhidGs66rP8HIhfFuRigMA8abTeNnNrHJ7ibeEQYOLc0UKrRx5k_4m2Vs3Vu9guR93nMCT1UhghuCGX-7bQjlbU0JHRsipWgwJoI346Pq8m_w_XF1iSXHdcfI4mn1LOdtgTrK2UV1ITvGsJSX1a_VZjrE3g8-oN7HPIXDBrLP75AZYvBhjXSwCMZ9gpx9DCg6pNEaAiAIJtqZyHE49gMgBymBjaMPtYU9BAvhgDawAxTHqVR0LkyKO3Q7BTCbaKZ88BnlfYNWyyXiAtPn1ROnhwwvzudVdf_xw93yc33z7dOX5fVNbXh5Z90LBz0YLYwov-E6Yy0seAcOc2sZxaLlvSFGO80pY5RxDK3T0gjSEetwR6-qN6e5-xR_HCEf1M5nA8OgA8RjVh2VWApB_gkSziTB7TxRnECTYs4JnNonv9NpUgSr2ZnaqlmNmtWo2Zn640yNpfryvOPY78A-FM-SSv76nOts9OCSDsbnB2xBOe66tmDvT9hPP8D03-vV3epruZT6q1Pd6aj0OpUN97cLTCheCEkEa-lvaDu-Xw</recordid><startdate>199807</startdate><enddate>199807</enddate><creator>Cornejo, J</creator><creator>Willows, R.D</creator><creator>Beale, S.I</creator><general>Blackwell Science, Ltd</general><general>Blackwell Science</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>199807</creationdate><title>Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803</title><author>Cornejo, J ; Willows, R.D ; Beale, S.I</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c6186-b8febeca8c8046f7cdde267ef06dd430856bc1cafa63443460e5fa9c8171df073</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>amino acid sequences</topic><topic>Bacterial Proteins - biosynthesis</topic><topic>Bacteriology</topic><topic>biliverdin</topic><topic>Biliverdine - biosynthesis</topic><topic>Biological and medical sciences</topic><topic>cell suspension culture</topic><topic>Cloning, Molecular</topic><topic>color</topic><topic>culture media</topic><topic>Cyanobacteria</topic><topic>Cyanobacteria - enzymology</topic><topic>Cyanobacteria - genetics</topic><topic>enzyme activity</topic><topic>Escherichia coli</topic><topic>Escherichia coli - genetics</topic><topic>Ferredoxins</topic><topic>Freshwater</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>gene expression</topic><topic>Gene Expression Regulation, Bacterial - physiology</topic><topic>genes</topic><topic>Genes, Bacterial - genetics</topic><topic>genome</topic><topic>heme</topic><topic>heme oxygenase (decyclizing)</topic><topic>Heme Oxygenase (Decyclizing) - chemistry</topic><topic>Heme Oxygenase (Decyclizing) - genetics</topic><topic>Heme Oxygenase (Decyclizing) - metabolism</topic><topic>Hemin</topic><topic>heterocyclic nitrogen compounds</topic><topic>iron</topic><topic>Light-Harvesting Protein Complexes</topic><topic>Metabolism. Enzymes</topic><topic>Microbiology</topic><topic>Molecular Weight</topic><topic>nucleotide sequences</topic><topic>nutrient deficiencies</topic><topic>open reading frames</topic><topic>Plant Proteins - biosynthesis</topic><topic>promoter regions</topic><topic>RNA, Bacterial - analysis</topic><topic>RNA, Messenger - analysis</topic><topic>Synechocystis</topic><topic>trace element deficiencies</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cornejo, J</creatorcontrib><creatorcontrib>Willows, R.D</creatorcontrib><creatorcontrib>Beale, S.I</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>The Plant journal : for cell and molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cornejo, J</au><au>Willows, R.D</au><au>Beale, S.I</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803</atitle><jtitle>The Plant journal : for cell and molecular biology</jtitle><addtitle>Plant J</addtitle><date>1998-07</date><risdate>1998</risdate><volume>15</volume><issue>1</issue><spage>99</spage><epage>107</epage><pages>99-107</pages><issn>0960-7412</issn><eissn>1365-313X</eissn><abstract>The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a predicted polypeptide that has a sequence similar to that of a conserved region of animal microsomal heme oxygenases was identified in the published genomic sequence of Synechocystis sp. PCC 6803. This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium.</abstract><cop>Oxford, UK</cop><pub>Blackwell Science, Ltd</pub><pmid>9744099</pmid><doi>10.1046/j.1365-313x.1998.00186.x</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | amino acid sequences Bacterial Proteins - biosynthesis Bacteriology biliverdin Biliverdine - biosynthesis Biological and medical sciences cell suspension culture Cloning, Molecular color culture media Cyanobacteria Cyanobacteria - enzymology Cyanobacteria - genetics enzyme activity Escherichia coli Escherichia coli - genetics Ferredoxins Freshwater Fundamental and applied biological sciences. Psychology gene expression Gene Expression Regulation, Bacterial - physiology genes Genes, Bacterial - genetics genome heme heme oxygenase (decyclizing) Heme Oxygenase (Decyclizing) - chemistry Heme Oxygenase (Decyclizing) - genetics Heme Oxygenase (Decyclizing) - metabolism Hemin heterocyclic nitrogen compounds iron Light-Harvesting Protein Complexes Metabolism. Enzymes Microbiology Molecular Weight nucleotide sequences nutrient deficiencies open reading frames Plant Proteins - biosynthesis promoter regions RNA, Bacterial - analysis RNA, Messenger - analysis Synechocystis trace element deficiencies |
title | Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803 |
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