Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803

The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a...

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Veröffentlicht in:The Plant journal : for cell and molecular biology 1998-07, Vol.15 (1), p.99-107
Hauptverfasser: Cornejo, J, Willows, R.D, Beale, S.I
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Willows, R.D
Beale, S.I
description The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a predicted polypeptide that has a sequence similar to that of a conserved region of animal microsomal heme oxygenases was identified in the published genomic sequence of Synechocystis sp. PCC 6803. This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium.
doi_str_mv 10.1046/j.1365-313x.1998.00186.x
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This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium.</description><identifier>ISSN: 0960-7412</identifier><identifier>EISSN: 1365-313X</identifier><identifier>DOI: 10.1046/j.1365-313x.1998.00186.x</identifier><identifier>PMID: 9744099</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Science, Ltd</publisher><subject>amino acid sequences ; Bacterial Proteins - biosynthesis ; Bacteriology ; biliverdin ; Biliverdine - biosynthesis ; Biological and medical sciences ; cell suspension culture ; Cloning, Molecular ; color ; culture media ; Cyanobacteria ; Cyanobacteria - enzymology ; Cyanobacteria - genetics ; enzyme activity ; Escherichia coli ; Escherichia coli - genetics ; Ferredoxins ; Freshwater ; Fundamental and applied biological sciences. Psychology ; gene expression ; Gene Expression Regulation, Bacterial - physiology ; genes ; Genes, Bacterial - genetics ; genome ; heme ; heme oxygenase (decyclizing) ; Heme Oxygenase (Decyclizing) - chemistry ; Heme Oxygenase (Decyclizing) - genetics ; Heme Oxygenase (Decyclizing) - metabolism ; Hemin ; heterocyclic nitrogen compounds ; iron ; Light-Harvesting Protein Complexes ; Metabolism. 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PCC 6803</title><title>The Plant journal : for cell and molecular biology</title><addtitle>Plant J</addtitle><description>The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a predicted polypeptide that has a sequence similar to that of a conserved region of animal microsomal heme oxygenases was identified in the published genomic sequence of Synechocystis sp. PCC 6803. This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium.</description><subject>amino acid sequences</subject><subject>Bacterial Proteins - biosynthesis</subject><subject>Bacteriology</subject><subject>biliverdin</subject><subject>Biliverdine - biosynthesis</subject><subject>Biological and medical sciences</subject><subject>cell suspension culture</subject><subject>Cloning, Molecular</subject><subject>color</subject><subject>culture media</subject><subject>Cyanobacteria</subject><subject>Cyanobacteria - enzymology</subject><subject>Cyanobacteria - genetics</subject><subject>enzyme activity</subject><subject>Escherichia coli</subject><subject>Escherichia coli - genetics</subject><subject>Ferredoxins</subject><subject>Freshwater</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gene expression</subject><subject>Gene Expression Regulation, Bacterial - physiology</subject><subject>genes</subject><subject>Genes, Bacterial - genetics</subject><subject>genome</subject><subject>heme</subject><subject>heme oxygenase (decyclizing)</subject><subject>Heme Oxygenase (Decyclizing) - chemistry</subject><subject>Heme Oxygenase (Decyclizing) - genetics</subject><subject>Heme Oxygenase (Decyclizing) - metabolism</subject><subject>Hemin</subject><subject>heterocyclic nitrogen compounds</subject><subject>iron</subject><subject>Light-Harvesting Protein Complexes</subject><subject>Metabolism. Enzymes</subject><subject>Microbiology</subject><subject>Molecular Weight</subject><subject>nucleotide sequences</subject><subject>nutrient deficiencies</subject><subject>open reading frames</subject><subject>Plant Proteins - biosynthesis</subject><subject>promoter regions</subject><subject>RNA, Bacterial - analysis</subject><subject>RNA, Messenger - analysis</subject><subject>Synechocystis</subject><subject>trace element deficiencies</subject><issn>0960-7412</issn><issn>1365-313X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkV2PEyEUhidGs66rP8HIhfFuRigMA8abTeNnNrHJ7ibeEQYOLc0UKrRx5k_4m2Vs3Vu9guR93nMCT1UhghuCGX-7bQjlbU0JHRsipWgwJoI346Pq8m_w_XF1iSXHdcfI4mn1LOdtgTrK2UV1ITvGsJSX1a_VZjrE3g8-oN7HPIXDBrLP75AZYvBhjXSwCMZ9gpx9DCg6pNEaAiAIJtqZyHE49gMgBymBjaMPtYU9BAvhgDawAxTHqVR0LkyKO3Q7BTCbaKZ88BnlfYNWyyXiAtPn1ROnhwwvzudVdf_xw93yc33z7dOX5fVNbXh5Z90LBz0YLYwov-E6Yy0seAcOc2sZxaLlvSFGO80pY5RxDK3T0gjSEetwR6-qN6e5-xR_HCEf1M5nA8OgA8RjVh2VWApB_gkSziTB7TxRnECTYs4JnNonv9NpUgSr2ZnaqlmNmtWo2Zn640yNpfryvOPY78A-FM-SSv76nOts9OCSDsbnB2xBOe66tmDvT9hPP8D03-vV3epruZT6q1Pd6aj0OpUN97cLTCheCEkEa-lvaDu-Xw</recordid><startdate>199807</startdate><enddate>199807</enddate><creator>Cornejo, J</creator><creator>Willows, R.D</creator><creator>Beale, S.I</creator><general>Blackwell Science, Ltd</general><general>Blackwell Science</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>199807</creationdate><title>Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803</title><author>Cornejo, J ; Willows, R.D ; Beale, S.I</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c6186-b8febeca8c8046f7cdde267ef06dd430856bc1cafa63443460e5fa9c8171df073</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>amino acid sequences</topic><topic>Bacterial Proteins - biosynthesis</topic><topic>Bacteriology</topic><topic>biliverdin</topic><topic>Biliverdine - biosynthesis</topic><topic>Biological and medical sciences</topic><topic>cell suspension culture</topic><topic>Cloning, Molecular</topic><topic>color</topic><topic>culture media</topic><topic>Cyanobacteria</topic><topic>Cyanobacteria - enzymology</topic><topic>Cyanobacteria - genetics</topic><topic>enzyme activity</topic><topic>Escherichia coli</topic><topic>Escherichia coli - genetics</topic><topic>Ferredoxins</topic><topic>Freshwater</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>gene expression</topic><topic>Gene Expression Regulation, Bacterial - physiology</topic><topic>genes</topic><topic>Genes, Bacterial - genetics</topic><topic>genome</topic><topic>heme</topic><topic>heme oxygenase (decyclizing)</topic><topic>Heme Oxygenase (Decyclizing) - chemistry</topic><topic>Heme Oxygenase (Decyclizing) - genetics</topic><topic>Heme Oxygenase (Decyclizing) - metabolism</topic><topic>Hemin</topic><topic>heterocyclic nitrogen compounds</topic><topic>iron</topic><topic>Light-Harvesting Protein Complexes</topic><topic>Metabolism. Enzymes</topic><topic>Microbiology</topic><topic>Molecular Weight</topic><topic>nucleotide sequences</topic><topic>nutrient deficiencies</topic><topic>open reading frames</topic><topic>Plant Proteins - biosynthesis</topic><topic>promoter regions</topic><topic>RNA, Bacterial - analysis</topic><topic>RNA, Messenger - analysis</topic><topic>Synechocystis</topic><topic>trace element deficiencies</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cornejo, J</creatorcontrib><creatorcontrib>Willows, R.D</creatorcontrib><creatorcontrib>Beale, S.I</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) 1: Biological Sciences &amp; Living Resources</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>The Plant journal : for cell and molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cornejo, J</au><au>Willows, R.D</au><au>Beale, S.I</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803</atitle><jtitle>The Plant journal : for cell and molecular biology</jtitle><addtitle>Plant J</addtitle><date>1998-07</date><risdate>1998</risdate><volume>15</volume><issue>1</issue><spage>99</spage><epage>107</epage><pages>99-107</pages><issn>0960-7412</issn><eissn>1365-313X</eissn><abstract>The phytobilin chromophores of phycobiliproteins and phytochromes are biosynthesized from heme in a pathway that begins with the opening of the tetrapyrrole macrocycle of protoheme to form biliverdin IX alpha, in a reaction catalyzed by heme oxygenase. A gene containing an open reading frame with a predicted polypeptide that has a sequence similar to that of a conserved region of animal microsomal heme oxygenases was identified in the published genomic sequence of Synechocystis sp. PCC 6803. This gene, named ho1, was cloned and expressed in Escherichia coli under the control of the lacZ promoter. Cells expressing the gene became green colored due to the accumulation of biliverdin IX alpha. The size of the expressed protein was equal to the predicted size of the Synechocystis gene product, named HO1. Heme oxygenase activity was assayed in incubations containing extract of transformed E. coli cells. Incubations containing extract of induced cells, but not those containing extract of uninduced cells, had ferredoxin-dependent heme oxygenase activity. With mesoheme as the substrate, the reaction product was identified as mesobiliverdin IX alpha by spectrophotometry and reverse-phase HPLC. Heme oxygenase activity was not sedimented by centrifugation at 100 000 g. Expression of HO1 increased several-fold during incubation of the cells for 72 h in iron-deficient medium.</abstract><cop>Oxford, UK</cop><pub>Blackwell Science, Ltd</pub><pmid>9744099</pmid><doi>10.1046/j.1365-313x.1998.00186.x</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
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subjects amino acid sequences
Bacterial Proteins - biosynthesis
Bacteriology
biliverdin
Biliverdine - biosynthesis
Biological and medical sciences
cell suspension culture
Cloning, Molecular
color
culture media
Cyanobacteria
Cyanobacteria - enzymology
Cyanobacteria - genetics
enzyme activity
Escherichia coli
Escherichia coli - genetics
Ferredoxins
Freshwater
Fundamental and applied biological sciences. Psychology
gene expression
Gene Expression Regulation, Bacterial - physiology
genes
Genes, Bacterial - genetics
genome
heme
heme oxygenase (decyclizing)
Heme Oxygenase (Decyclizing) - chemistry
Heme Oxygenase (Decyclizing) - genetics
Heme Oxygenase (Decyclizing) - metabolism
Hemin
heterocyclic nitrogen compounds
iron
Light-Harvesting Protein Complexes
Metabolism. Enzymes
Microbiology
Molecular Weight
nucleotide sequences
nutrient deficiencies
open reading frames
Plant Proteins - biosynthesis
promoter regions
RNA, Bacterial - analysis
RNA, Messenger - analysis
Synechocystis
trace element deficiencies
title Phytobilin biosynthesis: cloning and expression of a gene encoding soluble ferredoxin-dependent heme oxygenase from Synechocystis sp. PCC 6803
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