Sporosarcina macmurdoensis sp. nov., from a cyanobacterial mat sample from a pond in the McMurdo Dry Valleys, Antarctica
1 Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500 007, India 2 Department of Environmental and Information Science, Otsuma Women's University, Tamashi, Tokyo 206, Japan Correspondence S. Shivaji shivas{at}ccmb.res.in Strain CMS 21w T was isolated from a cyanobacterial mat s...
Gespeichert in:
| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2003-09, Vol.53 (5), p.1363-1367 |
|---|---|
| Hauptverfasser: | , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 1367 |
|---|---|
| container_issue | 5 |
| container_start_page | 1363 |
| container_title | International journal of systematic and evolutionary microbiology |
| container_volume | 53 |
| creator | Reddy, G. S. N Matsumoto, G. I Shivaji, S |
| description | 1 Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500 007, India
2 Department of Environmental and Information Science, Otsuma Women's University, Tamashi, Tokyo 206, Japan
Correspondence S. Shivaji shivas{at}ccmb.res.in
Strain CMS 21w T was isolated from a cyanobacterial mat sample taken from a pond located in the McMurdo Dry Valleys, Antarctica. Based on its phenotypic, chemotaxonomic and phylogenetic properties, strain CMS 21w T was identified as a member of the genus Sporosarcina . At the 16S rRNA gene level, CMS 21w T exhibited about 9396 % similarity to all reported species of Sporosarcina and exhibited a maximum similarity of 96 % to both Sporosarcina globispora and Sporosarcina psychrophila . Based on more than 3 % difference at the 16S rRNA gene sequence level and the presence of distinct differences with respect to phenotypic, biochemical and chemotaxonomic features, strain CMS 21w T (=MTCC 4670 T =DSM 15428 T =CIP 107784 T ) is proposed as the type strain of a novel species of Sporosarcina , Sporosarcina macmurdoensis sp. nov.
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02628-0.
The EMBL/GenBank/DDBJ accession number for the 16S rRNA gene sequence of strain CMS 21w T is AJ514408 . |
| doi_str_mv | 10.1099/ijs.0.02628-0 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_73649170</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>19164719</sourcerecordid><originalsourceid>FETCH-LOGICAL-c422t-a30e087a14dc1b0d5afe98f90293e33c62a0fbc8ab8835a5d6d0fd04f47fb9bc3</originalsourceid><addsrcrecordid>eNqFkUtv1DAURiNERUthyRZ5Q8WiCdex48TLqrwqtWLBY2vdOHbHVWIHOwPMv6_DDO2SlR86Ot_V_YriFYWKgpTv3F2qoIJa1F0JT4oTyoUoG2D86cO9FsfF85TuAPIHwLPimDLK8kueFH--ziGGhFE7j2RCPW3jEIxPLpE0V8SHX9U5sTFMBIneoQ896sVEh2OmF5JwmkfzD5iDH4jzZNkYcqNvVhV5H3fkB46j2aVzcuGXHLU4jS-KI4tjMi8P52nx_eOHb5efy-svn64uL65Lzet6KZGBga5FygdNexgatEZ2VkItmWFMixrB9rrDvutYg80gBrADcMtb28tes9PibO-dY_i5NWlRk0vajCN6E7ZJtUxwSVv4L0glFbylMoPlHtR5cSkaq-boJow7RUGtnajciQL1txO1il8fxNt-MsMjfSghA28OACaNo43otUuPXEM5bdkqervnNu5289tFo26Nn1weo3dhDW2YarJWMHYPnQWjrw</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>19164719</pqid></control><display><type>article</type><title>Sporosarcina macmurdoensis sp. nov., from a cyanobacterial mat sample from a pond in the McMurdo Dry Valleys, Antarctica</title><source>MEDLINE</source><source>Microbiology Society</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Alma/SFX Local Collection</source><creator>Reddy, G. S. N ; Matsumoto, G. I ; Shivaji, S</creator><creatorcontrib>Reddy, G. S. N ; Matsumoto, G. I ; Shivaji, S</creatorcontrib><description>1 Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500 007, India
2 Department of Environmental and Information Science, Otsuma Women's University, Tamashi, Tokyo 206, Japan
Correspondence S. Shivaji shivas{at}ccmb.res.in
Strain CMS 21w T was isolated from a cyanobacterial mat sample taken from a pond located in the McMurdo Dry Valleys, Antarctica. Based on its phenotypic, chemotaxonomic and phylogenetic properties, strain CMS 21w T was identified as a member of the genus Sporosarcina . At the 16S rRNA gene level, CMS 21w T exhibited about 9396 % similarity to all reported species of Sporosarcina and exhibited a maximum similarity of 96 % to both Sporosarcina globispora and Sporosarcina psychrophila . Based on more than 3 % difference at the 16S rRNA gene sequence level and the presence of distinct differences with respect to phenotypic, biochemical and chemotaxonomic features, strain CMS 21w T (=MTCC 4670 T =DSM 15428 T =CIP 107784 T ) is proposed as the type strain of a novel species of Sporosarcina , Sporosarcina macmurdoensis sp. nov.
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02628-0.
The EMBL/GenBank/DDBJ accession number for the 16S rRNA gene sequence of strain CMS 21w T is AJ514408 .</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.02628-0</identifier><identifier>PMID: 13130019</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Antarctic Regions ; Bacillaceae - classification ; Bacillaceae - genetics ; Bacillaceae - isolation & purification ; Bacillaceae - metabolism ; Bacteriology ; Biological and medical sciences ; Cyanobacteria - isolation & purification ; Cyanophyta ; DNA, Bacterial - genetics ; DNA, Ribosomal - genetics ; Fresh Water - microbiology ; Freshwater ; Fundamental and applied biological sciences. Psychology ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Phenotype ; Phylogeny ; RNA, Bacterial - genetics ; RNA, Ribosomal, 16S - genetics ; Sporosarcina macmurdoensis ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2003-09, Vol.53 (5), p.1363-1367</ispartof><rights>2004 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c422t-a30e087a14dc1b0d5afe98f90293e33c62a0fbc8ab8835a5d6d0fd04f47fb9bc3</citedby><cites>FETCH-LOGICAL-c422t-a30e087a14dc1b0d5afe98f90293e33c62a0fbc8ab8835a5d6d0fd04f47fb9bc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,3733,3734,27905,27906</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15141730$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/13130019$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Reddy, G. S. N</creatorcontrib><creatorcontrib>Matsumoto, G. I</creatorcontrib><creatorcontrib>Shivaji, S</creatorcontrib><title>Sporosarcina macmurdoensis sp. nov., from a cyanobacterial mat sample from a pond in the McMurdo Dry Valleys, Antarctica</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500 007, India
2 Department of Environmental and Information Science, Otsuma Women's University, Tamashi, Tokyo 206, Japan
Correspondence S. Shivaji shivas{at}ccmb.res.in
Strain CMS 21w T was isolated from a cyanobacterial mat sample taken from a pond located in the McMurdo Dry Valleys, Antarctica. Based on its phenotypic, chemotaxonomic and phylogenetic properties, strain CMS 21w T was identified as a member of the genus Sporosarcina . At the 16S rRNA gene level, CMS 21w T exhibited about 9396 % similarity to all reported species of Sporosarcina and exhibited a maximum similarity of 96 % to both Sporosarcina globispora and Sporosarcina psychrophila . Based on more than 3 % difference at the 16S rRNA gene sequence level and the presence of distinct differences with respect to phenotypic, biochemical and chemotaxonomic features, strain CMS 21w T (=MTCC 4670 T =DSM 15428 T =CIP 107784 T ) is proposed as the type strain of a novel species of Sporosarcina , Sporosarcina macmurdoensis sp. nov.
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02628-0.
The EMBL/GenBank/DDBJ accession number for the 16S rRNA gene sequence of strain CMS 21w T is AJ514408 .</description><subject>Antarctic Regions</subject><subject>Bacillaceae - classification</subject><subject>Bacillaceae - genetics</subject><subject>Bacillaceae - isolation & purification</subject><subject>Bacillaceae - metabolism</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>Cyanobacteria - isolation & purification</subject><subject>Cyanophyta</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Ribosomal - genetics</subject><subject>Fresh Water - microbiology</subject><subject>Freshwater</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>RNA, Bacterial - genetics</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sporosarcina macmurdoensis</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUtv1DAURiNERUthyRZ5Q8WiCdex48TLqrwqtWLBY2vdOHbHVWIHOwPMv6_DDO2SlR86Ot_V_YriFYWKgpTv3F2qoIJa1F0JT4oTyoUoG2D86cO9FsfF85TuAPIHwLPimDLK8kueFH--ziGGhFE7j2RCPW3jEIxPLpE0V8SHX9U5sTFMBIneoQ896sVEh2OmF5JwmkfzD5iDH4jzZNkYcqNvVhV5H3fkB46j2aVzcuGXHLU4jS-KI4tjMi8P52nx_eOHb5efy-svn64uL65Lzet6KZGBga5FygdNexgatEZ2VkItmWFMixrB9rrDvutYg80gBrADcMtb28tes9PibO-dY_i5NWlRk0vajCN6E7ZJtUxwSVv4L0glFbylMoPlHtR5cSkaq-boJow7RUGtnajciQL1txO1il8fxNt-MsMjfSghA28OACaNo43otUuPXEM5bdkqervnNu5289tFo26Nn1weo3dhDW2YarJWMHYPnQWjrw</recordid><startdate>20030901</startdate><enddate>20030901</enddate><creator>Reddy, G. S. N</creator><creator>Matsumoto, G. I</creator><creator>Shivaji, S</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20030901</creationdate><title>Sporosarcina macmurdoensis sp. nov., from a cyanobacterial mat sample from a pond in the McMurdo Dry Valleys, Antarctica</title><author>Reddy, G. S. N ; Matsumoto, G. I ; Shivaji, S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c422t-a30e087a14dc1b0d5afe98f90293e33c62a0fbc8ab8835a5d6d0fd04f47fb9bc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Antarctic Regions</topic><topic>Bacillaceae - classification</topic><topic>Bacillaceae - genetics</topic><topic>Bacillaceae - isolation & purification</topic><topic>Bacillaceae - metabolism</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>Cyanobacteria - isolation & purification</topic><topic>Cyanophyta</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA, Ribosomal - genetics</topic><topic>Fresh Water - microbiology</topic><topic>Freshwater</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sporosarcina macmurdoensis</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Reddy, G. S. N</creatorcontrib><creatorcontrib>Matsumoto, G. I</creatorcontrib><creatorcontrib>Shivaji, S</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Reddy, G. S. N</au><au>Matsumoto, G. I</au><au>Shivaji, S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sporosarcina macmurdoensis sp. nov., from a cyanobacterial mat sample from a pond in the McMurdo Dry Valleys, Antarctica</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2003-09-01</date><risdate>2003</risdate><volume>53</volume><issue>5</issue><spage>1363</spage><epage>1367</epage><pages>1363-1367</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500 007, India
2 Department of Environmental and Information Science, Otsuma Women's University, Tamashi, Tokyo 206, Japan
Correspondence S. Shivaji shivas{at}ccmb.res.in
Strain CMS 21w T was isolated from a cyanobacterial mat sample taken from a pond located in the McMurdo Dry Valleys, Antarctica. Based on its phenotypic, chemotaxonomic and phylogenetic properties, strain CMS 21w T was identified as a member of the genus Sporosarcina . At the 16S rRNA gene level, CMS 21w T exhibited about 9396 % similarity to all reported species of Sporosarcina and exhibited a maximum similarity of 96 % to both Sporosarcina globispora and Sporosarcina psychrophila . Based on more than 3 % difference at the 16S rRNA gene sequence level and the presence of distinct differences with respect to phenotypic, biochemical and chemotaxonomic features, strain CMS 21w T (=MTCC 4670 T =DSM 15428 T =CIP 107784 T ) is proposed as the type strain of a novel species of Sporosarcina , Sporosarcina macmurdoensis sp. nov.
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02628-0.
The EMBL/GenBank/DDBJ accession number for the 16S rRNA gene sequence of strain CMS 21w T is AJ514408 .</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>13130019</pmid><doi>10.1099/ijs.0.02628-0</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1466-5026 |
| ispartof | International journal of systematic and evolutionary microbiology, 2003-09, Vol.53 (5), p.1363-1367 |
| issn | 1466-5026 1466-5034 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_73649170 |
| source | MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
| subjects | Antarctic Regions Bacillaceae - classification Bacillaceae - genetics Bacillaceae - isolation & purification Bacillaceae - metabolism Bacteriology Biological and medical sciences Cyanobacteria - isolation & purification Cyanophyta DNA, Bacterial - genetics DNA, Ribosomal - genetics Fresh Water - microbiology Freshwater Fundamental and applied biological sciences. Psychology Microbiology Miscellaneous Molecular Sequence Data Phenotype Phylogeny RNA, Bacterial - genetics RNA, Ribosomal, 16S - genetics Sporosarcina macmurdoensis Systematics |
| title | Sporosarcina macmurdoensis sp. nov., from a cyanobacterial mat sample from a pond in the McMurdo Dry Valleys, Antarctica |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-18T09%3A08%3A01IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Sporosarcina%20macmurdoensis%20sp.%20nov.,%20from%20a%20cyanobacterial%20mat%20sample%20from%20a%20pond%20in%20the%20McMurdo%20Dry%20Valleys,%20Antarctica&rft.jtitle=International%20journal%20of%20systematic%20and%20evolutionary%20microbiology&rft.au=Reddy,%20G.%20S.%20N&rft.date=2003-09-01&rft.volume=53&rft.issue=5&rft.spage=1363&rft.epage=1367&rft.pages=1363-1367&rft.issn=1466-5026&rft.eissn=1466-5034&rft_id=info:doi/10.1099/ijs.0.02628-0&rft_dat=%3Cproquest_cross%3E19164719%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=19164719&rft_id=info:pmid/13130019&rfr_iscdi=true |