Molecular genetic and potential biochemical characteristics of patients with T-protein deficiency as a cause of glycine encephalopathy (NKH)
A defect in the P-protein component of the glycine cleavage system has been the most frequent abnormality found in patients with glycine encephalopathy (NKH). In a retrospective study of a more specific group of NKH patients, however, we found that >50% had T-protein mutations. The patients studi...
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Veröffentlicht in: | Molecular genetics and metabolism 2003-08, Vol.79 (4), p.272-280 |
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creator | Toone, Jennifer R Applegarth, Derek A Levy, Harvey L Coulter-Mackie, Marion B Lee, Gary |
description | A defect in the P-protein component of the glycine cleavage system has been the most frequent abnormality found in patients with glycine encephalopathy (NKH). In a retrospective study of a more specific group of NKH patients, however, we found that >50% had T-protein mutations. The patients studied had one or more of the following unusual biochemical findings: residual glycine cleavage system activity in liver assayed by the standard method or a newly developed micromethod, residual glycine cleavage system activity in lymphoblasts, and/or increased amniotic fluid glycine/serine ratio with a normal amniotic fluid glycine level in prenatal diagnosis. The selected patients had a much higher incidence of T-protein defects than expected in the general NKH patient population. We report, here, three novel mutations and five polymorphisms in the T-protein gene, PCR/restriction enzyme methods for one mutation (R296H) and two polymorphisms (E211K and R318R), and an estimation of their frequency in normal controls. The co-occurrence of the polymorphism E211K with the mutation R320H in patients with a severe phenotype is discussed. |
doi_str_mv | 10.1016/S1096-7192(03)00115-X |
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In a retrospective study of a more specific group of NKH patients, however, we found that >50% had T-protein mutations. The patients studied had one or more of the following unusual biochemical findings: residual glycine cleavage system activity in liver assayed by the standard method or a newly developed micromethod, residual glycine cleavage system activity in lymphoblasts, and/or increased amniotic fluid glycine/serine ratio with a normal amniotic fluid glycine level in prenatal diagnosis. The selected patients had a much higher incidence of T-protein defects than expected in the general NKH patient population. We report, here, three novel mutations and five polymorphisms in the T-protein gene, PCR/restriction enzyme methods for one mutation (R296H) and two polymorphisms (E211K and R318R), and an estimation of their frequency in normal controls. The co-occurrence of the polymorphism E211K with the mutation R320H in patients with a severe phenotype is discussed.</description><identifier>ISSN: 1096-7192</identifier><identifier>EISSN: 1096-7206</identifier><identifier>DOI: 10.1016/S1096-7192(03)00115-X</identifier><identifier>PMID: 12948742</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Aminomethyltransferase ; AMT ; Base Sequence ; GLDC ; Glycine ; Glycine - blood ; Glycine - metabolism ; Glycine cleavage system ; Herpesvirus 4, Human - genetics ; Humans ; Hydroxymethyl and Formyl Transferases - deficiency ; Hydroxymethyl and Formyl Transferases - genetics ; Hyperglycinemia, Nonketotic - enzymology ; Hyperglycinemia, Nonketotic - genetics ; Infant, Newborn ; Liver - metabolism ; Lymphocytes - blood ; Molecular Diagnostic Techniques ; Molecular Sequence Data ; NKH ; P-protein ; Polymorphism, Genetic ; Prenatal Diagnosis ; Retrospective Studies ; T-protein</subject><ispartof>Molecular genetics and metabolism, 2003-08, Vol.79 (4), p.272-280</ispartof><rights>2003 Elsevier Science (USA)</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c444t-956ffc147dec6e650618d5864249275a401519ec5f77b05629045174436df01a3</citedby><cites>FETCH-LOGICAL-c444t-956ffc147dec6e650618d5864249275a401519ec5f77b05629045174436df01a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/S1096-7192(03)00115-X$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12948742$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Toone, Jennifer R</creatorcontrib><creatorcontrib>Applegarth, Derek A</creatorcontrib><creatorcontrib>Levy, Harvey L</creatorcontrib><creatorcontrib>Coulter-Mackie, Marion B</creatorcontrib><creatorcontrib>Lee, Gary</creatorcontrib><title>Molecular genetic and potential biochemical characteristics of patients with T-protein deficiency as a cause of glycine encephalopathy (NKH)</title><title>Molecular genetics and metabolism</title><addtitle>Mol Genet Metab</addtitle><description>A defect in the P-protein component of the glycine cleavage system has been the most frequent abnormality found in patients with glycine encephalopathy (NKH). In a retrospective study of a more specific group of NKH patients, however, we found that >50% had T-protein mutations. The patients studied had one or more of the following unusual biochemical findings: residual glycine cleavage system activity in liver assayed by the standard method or a newly developed micromethod, residual glycine cleavage system activity in lymphoblasts, and/or increased amniotic fluid glycine/serine ratio with a normal amniotic fluid glycine level in prenatal diagnosis. The selected patients had a much higher incidence of T-protein defects than expected in the general NKH patient population. We report, here, three novel mutations and five polymorphisms in the T-protein gene, PCR/restriction enzyme methods for one mutation (R296H) and two polymorphisms (E211K and R318R), and an estimation of their frequency in normal controls. The co-occurrence of the polymorphism E211K with the mutation R320H in patients with a severe phenotype is discussed.</description><subject>Aminomethyltransferase</subject><subject>AMT</subject><subject>Base Sequence</subject><subject>GLDC</subject><subject>Glycine</subject><subject>Glycine - blood</subject><subject>Glycine - metabolism</subject><subject>Glycine cleavage system</subject><subject>Herpesvirus 4, Human - genetics</subject><subject>Humans</subject><subject>Hydroxymethyl and Formyl Transferases - deficiency</subject><subject>Hydroxymethyl and Formyl Transferases - genetics</subject><subject>Hyperglycinemia, Nonketotic - enzymology</subject><subject>Hyperglycinemia, Nonketotic - genetics</subject><subject>Infant, Newborn</subject><subject>Liver - metabolism</subject><subject>Lymphocytes - blood</subject><subject>Molecular Diagnostic Techniques</subject><subject>Molecular Sequence Data</subject><subject>NKH</subject><subject>P-protein</subject><subject>Polymorphism, Genetic</subject><subject>Prenatal Diagnosis</subject><subject>Retrospective Studies</subject><subject>T-protein</subject><issn>1096-7192</issn><issn>1096-7206</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkctu1UAMhkcIREvhEUCzQu0idJzMJVkhVAFFbWFBkbobzXGcZlBOEmYmoPMOPDRzLhXLrmzZ329b_hl7DeIdCNDn30E0ujDQlKeiOhMCQBV3T9jxvlwK_fQhz8gRexHjzx3UyOfsCMpG1kaWx-zvzTQQLoML_J5GSh65G1s-T4nG5N3AV37CntYec469Cw4TBR8zGPnU8dkln8nI__jU89tiDlnpR95S5zF3cMNd5I6jWyJtBffDBv1IPLdo7t0w5Qn9hp9-vbo8e8medW6I9OoQT9iPTx9vLy6L62-fv1x8uC5QSpmKRumuQ5CmJdSkldBQt6rWspRNaZSTAhQ0hKozZiWULhshFRgpK912Alx1wt7u5-Zrfy0Uk137iDQMbqRpidZUWtSVrh4Foa5BaaMzqPYghinGQJ2dg1-7sLEg7NYvu_PLbs2worI7K-xd1r05LFhWa2r_qw4GZeD9HqD8j9-ego27t1LrA2Gy7eQfWfEPJZml1Q</recordid><startdate>20030801</startdate><enddate>20030801</enddate><creator>Toone, Jennifer R</creator><creator>Applegarth, Derek A</creator><creator>Levy, Harvey L</creator><creator>Coulter-Mackie, Marion B</creator><creator>Lee, Gary</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20030801</creationdate><title>Molecular genetic and potential biochemical characteristics of patients with T-protein deficiency as a cause of glycine encephalopathy (NKH)</title><author>Toone, Jennifer R ; Applegarth, Derek A ; Levy, Harvey L ; Coulter-Mackie, Marion B ; Lee, Gary</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c444t-956ffc147dec6e650618d5864249275a401519ec5f77b05629045174436df01a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Aminomethyltransferase</topic><topic>AMT</topic><topic>Base Sequence</topic><topic>GLDC</topic><topic>Glycine</topic><topic>Glycine - blood</topic><topic>Glycine - metabolism</topic><topic>Glycine cleavage system</topic><topic>Herpesvirus 4, Human - genetics</topic><topic>Humans</topic><topic>Hydroxymethyl and Formyl Transferases - deficiency</topic><topic>Hydroxymethyl and Formyl Transferases - genetics</topic><topic>Hyperglycinemia, Nonketotic - enzymology</topic><topic>Hyperglycinemia, Nonketotic - genetics</topic><topic>Infant, Newborn</topic><topic>Liver - metabolism</topic><topic>Lymphocytes - blood</topic><topic>Molecular Diagnostic Techniques</topic><topic>Molecular Sequence Data</topic><topic>NKH</topic><topic>P-protein</topic><topic>Polymorphism, Genetic</topic><topic>Prenatal Diagnosis</topic><topic>Retrospective Studies</topic><topic>T-protein</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Toone, Jennifer R</creatorcontrib><creatorcontrib>Applegarth, Derek A</creatorcontrib><creatorcontrib>Levy, Harvey L</creatorcontrib><creatorcontrib>Coulter-Mackie, Marion B</creatorcontrib><creatorcontrib>Lee, Gary</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular genetics and metabolism</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Toone, Jennifer R</au><au>Applegarth, Derek A</au><au>Levy, Harvey L</au><au>Coulter-Mackie, Marion B</au><au>Lee, Gary</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular genetic and potential biochemical characteristics of patients with T-protein deficiency as a cause of glycine encephalopathy (NKH)</atitle><jtitle>Molecular genetics and metabolism</jtitle><addtitle>Mol Genet Metab</addtitle><date>2003-08-01</date><risdate>2003</risdate><volume>79</volume><issue>4</issue><spage>272</spage><epage>280</epage><pages>272-280</pages><issn>1096-7192</issn><eissn>1096-7206</eissn><abstract>A defect in the P-protein component of the glycine cleavage system has been the most frequent abnormality found in patients with glycine encephalopathy (NKH). In a retrospective study of a more specific group of NKH patients, however, we found that >50% had T-protein mutations. The patients studied had one or more of the following unusual biochemical findings: residual glycine cleavage system activity in liver assayed by the standard method or a newly developed micromethod, residual glycine cleavage system activity in lymphoblasts, and/or increased amniotic fluid glycine/serine ratio with a normal amniotic fluid glycine level in prenatal diagnosis. The selected patients had a much higher incidence of T-protein defects than expected in the general NKH patient population. We report, here, three novel mutations and five polymorphisms in the T-protein gene, PCR/restriction enzyme methods for one mutation (R296H) and two polymorphisms (E211K and R318R), and an estimation of their frequency in normal controls. The co-occurrence of the polymorphism E211K with the mutation R320H in patients with a severe phenotype is discussed.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>12948742</pmid><doi>10.1016/S1096-7192(03)00115-X</doi><tpages>9</tpages></addata></record> |
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subjects | Aminomethyltransferase AMT Base Sequence GLDC Glycine Glycine - blood Glycine - metabolism Glycine cleavage system Herpesvirus 4, Human - genetics Humans Hydroxymethyl and Formyl Transferases - deficiency Hydroxymethyl and Formyl Transferases - genetics Hyperglycinemia, Nonketotic - enzymology Hyperglycinemia, Nonketotic - genetics Infant, Newborn Liver - metabolism Lymphocytes - blood Molecular Diagnostic Techniques Molecular Sequence Data NKH P-protein Polymorphism, Genetic Prenatal Diagnosis Retrospective Studies T-protein |
title | Molecular genetic and potential biochemical characteristics of patients with T-protein deficiency as a cause of glycine encephalopathy (NKH) |
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