Location of haem in bacterioferritin of E. coli
. A low‐resolution partial structure of bacterioferritin was solved using a combination of molecular replacement and rigid‐body refinement methods. Modification of bacterioferritin crystals by soaking in tetrachloroplatinate results in a phase transition from tetragonal symmetry (space group P42212)...
Gespeichert in:
Veröffentlicht in: | Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 1993-11, Vol.49 (6), p.597-600 |
---|---|
Hauptverfasser: | , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 600 |
---|---|
container_issue | 6 |
container_start_page | 597 |
container_title | Acta crystallographica. Section D, Biological crystallography. |
container_volume | 49 |
creator | Frolow, F. Kalb (Gilboa), A. J. Yariv, J. |
description | . A low‐resolution partial structure of bacterioferritin was solved using a combination of molecular replacement and rigid‐body refinement methods. Modification of bacterioferritin crystals by soaking in tetrachloroplatinate results in a phase transition from tetragonal symmetry (space group P42212) to a pseudo‐cubic one (approximate space group I432). Helical parts of human H ferritin structure stripped of side chains beyond the Cβ atoms were used as the model. An electron‐density map of the refined model revealed a region of extended density which by its shape and position in a pocket between helices was identified as haem. Inclusion of haem in the refinement showed that it can occupy only one of two symmetry‐related sites near a twofold axis of the molecule. |
doi_str_mv | 10.1107/S0907444993007073 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_73494121</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>73494121</sourcerecordid><originalsourceid>FETCH-LOGICAL-c2606-12865b9064d67122b6acd9c582a0852085ed9516214d577e2feee8c048f1e7e3</originalsourceid><addsrcrecordid>eNqFkMtKxDAUhoMo3h_AjXQh7qon92Yp3kYsXnBAXYVMeorRzlSTDurbW51BBRcuDjmQ7_sP_IRsUdijFPT-DRjQQghjOIAGzRfIKuXG5ABCL_7aV8haSo8AwBjXy2SFSmZMr62S_bL1rgvtJGvr7MHhOAuTbOR8hzG0NcYYuvD1d7yX-bYJG2Spdk3Czfm7ToYnx8PDQV5enp4dHpS5ZwpUTlmh5MiAEpXSlLGRcr4yXhbMQSFZP1gZSRWjopJaI6sRsfAgipqiRr5Odmexz7F9mWLq7Dgkj03jJthOk9VcGEEZ7UE6A31sU4pY2-cYxi6-Wwr2syT7p6Te2Z6HT0djrH6MeSs9sDMHXPKuqaOb-JC-OcE0yOIzp5hhr6HB9_8P24P7o8EAFFe9ms_UkDp8-1ZdfLJKcy3t7cWpLe_Or8obObTX_ANye4rw</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>73494121</pqid></control><display><type>article</type><title>Location of haem in bacterioferritin of E. coli</title><source>Crystallography Journals Online</source><creator>Frolow, F. ; Kalb (Gilboa), A. J. ; Yariv, J.</creator><creatorcontrib>Frolow, F. ; Kalb (Gilboa), A. J. ; Yariv, J.</creatorcontrib><description>. A low‐resolution partial structure of bacterioferritin was solved using a combination of molecular replacement and rigid‐body refinement methods. Modification of bacterioferritin crystals by soaking in tetrachloroplatinate results in a phase transition from tetragonal symmetry (space group P42212) to a pseudo‐cubic one (approximate space group I432). Helical parts of human H ferritin structure stripped of side chains beyond the Cβ atoms were used as the model. An electron‐density map of the refined model revealed a region of extended density which by its shape and position in a pocket between helices was identified as haem. Inclusion of haem in the refinement showed that it can occupy only one of two symmetry‐related sites near a twofold axis of the molecule.</description><identifier>ISSN: 1399-0047</identifier><identifier>ISSN: 0907-4449</identifier><identifier>EISSN: 1399-0047</identifier><identifier>DOI: 10.1107/S0907444993007073</identifier><identifier>PMID: 15299499</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: International Union of Crystallography</publisher><subject>Analytical, structural and metabolic biochemistry ; Biological and medical sciences ; Crystalline structure ; Fundamental and applied biological sciences. Psychology ; Hemoproteins ; Metalloproteins ; Molecular biophysics ; Proteins ; Structure in molecular biology</subject><ispartof>Acta crystallographica. Section D, Biological crystallography., 1993-11, Vol.49 (6), p.597-600</ispartof><rights>1994 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2606-12865b9064d67122b6acd9c582a0852085ed9516214d577e2feee8c048f1e7e3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3973,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=4270583$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15299499$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Frolow, F.</creatorcontrib><creatorcontrib>Kalb (Gilboa), A. J.</creatorcontrib><creatorcontrib>Yariv, J.</creatorcontrib><title>Location of haem in bacterioferritin of E. coli</title><title>Acta crystallographica. Section D, Biological crystallography.</title><addtitle>Acta Cryst. D</addtitle><description>. A low‐resolution partial structure of bacterioferritin was solved using a combination of molecular replacement and rigid‐body refinement methods. Modification of bacterioferritin crystals by soaking in tetrachloroplatinate results in a phase transition from tetragonal symmetry (space group P42212) to a pseudo‐cubic one (approximate space group I432). Helical parts of human H ferritin structure stripped of side chains beyond the Cβ atoms were used as the model. An electron‐density map of the refined model revealed a region of extended density which by its shape and position in a pocket between helices was identified as haem. Inclusion of haem in the refinement showed that it can occupy only one of two symmetry‐related sites near a twofold axis of the molecule.</description><subject>Analytical, structural and metabolic biochemistry</subject><subject>Biological and medical sciences</subject><subject>Crystalline structure</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hemoproteins</subject><subject>Metalloproteins</subject><subject>Molecular biophysics</subject><subject>Proteins</subject><subject>Structure in molecular biology</subject><issn>1399-0047</issn><issn>0907-4449</issn><issn>1399-0047</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1993</creationdate><recordtype>article</recordtype><recordid>eNqFkMtKxDAUhoMo3h_AjXQh7qon92Yp3kYsXnBAXYVMeorRzlSTDurbW51BBRcuDjmQ7_sP_IRsUdijFPT-DRjQQghjOIAGzRfIKuXG5ABCL_7aV8haSo8AwBjXy2SFSmZMr62S_bL1rgvtJGvr7MHhOAuTbOR8hzG0NcYYuvD1d7yX-bYJG2Spdk3Czfm7ToYnx8PDQV5enp4dHpS5ZwpUTlmh5MiAEpXSlLGRcr4yXhbMQSFZP1gZSRWjopJaI6sRsfAgipqiRr5Odmexz7F9mWLq7Dgkj03jJthOk9VcGEEZ7UE6A31sU4pY2-cYxi6-Wwr2syT7p6Te2Z6HT0djrH6MeSs9sDMHXPKuqaOb-JC-OcE0yOIzp5hhr6HB9_8P24P7o8EAFFe9ms_UkDp8-1ZdfLJKcy3t7cWpLe_Or8obObTX_ANye4rw</recordid><startdate>199311</startdate><enddate>199311</enddate><creator>Frolow, F.</creator><creator>Kalb (Gilboa), A. J.</creator><creator>Yariv, J.</creator><general>International Union of Crystallography</general><general>Blackwell</general><scope>BSCLL</scope><scope>IQODW</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>199311</creationdate><title>Location of haem in bacterioferritin of E. coli</title><author>Frolow, F. ; Kalb (Gilboa), A. J. ; Yariv, J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2606-12865b9064d67122b6acd9c582a0852085ed9516214d577e2feee8c048f1e7e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1993</creationdate><topic>Analytical, structural and metabolic biochemistry</topic><topic>Biological and medical sciences</topic><topic>Crystalline structure</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hemoproteins</topic><topic>Metalloproteins</topic><topic>Molecular biophysics</topic><topic>Proteins</topic><topic>Structure in molecular biology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Frolow, F.</creatorcontrib><creatorcontrib>Kalb (Gilboa), A. J.</creatorcontrib><creatorcontrib>Yariv, J.</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Frolow, F.</au><au>Kalb (Gilboa), A. J.</au><au>Yariv, J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Location of haem in bacterioferritin of E. coli</atitle><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle><addtitle>Acta Cryst. D</addtitle><date>1993-11</date><risdate>1993</risdate><volume>49</volume><issue>6</issue><spage>597</spage><epage>600</epage><pages>597-600</pages><issn>1399-0047</issn><issn>0907-4449</issn><eissn>1399-0047</eissn><abstract>. A low‐resolution partial structure of bacterioferritin was solved using a combination of molecular replacement and rigid‐body refinement methods. Modification of bacterioferritin crystals by soaking in tetrachloroplatinate results in a phase transition from tetragonal symmetry (space group P42212) to a pseudo‐cubic one (approximate space group I432). Helical parts of human H ferritin structure stripped of side chains beyond the Cβ atoms were used as the model. An electron‐density map of the refined model revealed a region of extended density which by its shape and position in a pocket between helices was identified as haem. Inclusion of haem in the refinement showed that it can occupy only one of two symmetry‐related sites near a twofold axis of the molecule.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>15299499</pmid><doi>10.1107/S0907444993007073</doi><tpages>4</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1399-0047 |
ispartof | Acta crystallographica. Section D, Biological crystallography., 1993-11, Vol.49 (6), p.597-600 |
issn | 1399-0047 0907-4449 1399-0047 |
language | eng |
recordid | cdi_proquest_miscellaneous_73494121 |
source | Crystallography Journals Online |
subjects | Analytical, structural and metabolic biochemistry Biological and medical sciences Crystalline structure Fundamental and applied biological sciences. Psychology Hemoproteins Metalloproteins Molecular biophysics Proteins Structure in molecular biology |
title | Location of haem in bacterioferritin of E. coli |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-03T13%3A23%3A17IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Location%20of%20haem%20in%20bacterioferritin%20of%20E.%20coli&rft.jtitle=Acta%20crystallographica.%20Section%20D,%20Biological%20crystallography.&rft.au=Frolow,%20F.&rft.date=1993-11&rft.volume=49&rft.issue=6&rft.spage=597&rft.epage=600&rft.pages=597-600&rft.issn=1399-0047&rft.eissn=1399-0047&rft_id=info:doi/10.1107/S0907444993007073&rft_dat=%3Cproquest_cross%3E73494121%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=73494121&rft_id=info:pmid/15299499&rfr_iscdi=true |