Cetobacterium somerae sp. nov. from Human Feces and Emended Description of the Genus Cetobacterium
Phenotypic and phylogenetic studies were performed on four isolates of an unidentified gram-negative, microaerotolerant, non-spore-forming, rod-shaped bacterium isolated from the feces of children. The unknown organism was bile resistant and produced acetic acid as the major end product of metabolis...
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| Veröffentlicht in: | Systematic and applied microbiology 2003-06, Vol.26 (2), p.177-181 |
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| creator | Finegold, Sydney M. Vaisanen, Marja-Liisa Molitoris, Denise R. Tomzynski, Thomas J. Song, Yuli Liu, Chengxu Collins, Matthew D. Lawson, Paul A. |
| description | Phenotypic and phylogenetic studies were performed on four isolates of an unidentified gram-negative, microaerotolerant, non-spore-forming, rod-shaped bacterium isolated from the feces of children. The unknown organism was bile resistant and produced acetic acid as the major end product of metabolism of peptides and carbohydrates. It possessed a low DNA G + C content of 31 mol %. Comparative 16S rRNA gene sequencing demonstrated that the four isolates were phylogenetically identical (100% 16S rRNA sequence similarity) and represent a hitherto unknown sub-line within the genus
Cetobacterium. The novel bacterium displayed approximately 5% sequence divergence with
Cetobacterium ceti, and can be readily distinguished from the latter by physiological and biochemical criteria. Based on phylogenetic and phenotypic evidence, it is proposed that the unknown fecal bacterium be classified in the genus
Cetobacterium, as
Cetobacterium somerae sp. nov. The proposed type strain of
Cetobacterium somerae is WAL 14325
T (ATCC BAA-474
T = CCUG 46254T). |
| doi_str_mv | 10.1078/072320203322346010 |
| format | Article |
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Cetobacterium. The novel bacterium displayed approximately 5% sequence divergence with
Cetobacterium ceti, and can be readily distinguished from the latter by physiological and biochemical criteria. Based on phylogenetic and phenotypic evidence, it is proposed that the unknown fecal bacterium be classified in the genus
Cetobacterium, as
Cetobacterium somerae sp. nov. The proposed type strain of
Cetobacterium somerae is WAL 14325
T (ATCC BAA-474
T = CCUG 46254T).</description><identifier>ISSN: 0723-2020</identifier><identifier>EISSN: 1618-0984</identifier><identifier>DOI: 10.1078/072320203322346010</identifier><identifier>PMID: 12866843</identifier><identifier>CODEN: SAMIDF</identifier><language>eng</language><publisher>Jena: Elsevier GmbH</publisher><subject>16S rRNA ; Age of Onset ; autism ; Autistic Disorder - drug therapy ; Autistic Disorder - epidemiology ; Autistic Disorder - microbiology ; Bacterial Typing Techniques ; Base Composition ; Biological and medical sciences ; Carbohydrate Metabolism ; Cetobacterium somerae sp. nov ; Child ; Child, Preschool ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; Fatty Acids - analysis ; feces ; Feces - microbiology ; Fundamental and applied biological sciences. Psychology ; Gram-Negative Aerobic Rods and Cocci - classification ; Gram-Negative Aerobic Rods and Cocci - genetics ; Gram-Negative Aerobic Rods and Cocci - isolation & purification ; Growth, nutrition, metabolism, transports, enzymes. Molecular biology ; Humans ; Intestines - microbiology ; Male ; Microbiology ; Molecular Sequence Data ; Mycology ; Phenotype ; Phylogeny ; Ribotyping ; Species Specificity ; Systematics ; taxonomy ; Vancomycin - therapeutic use ; Virology</subject><ispartof>Systematic and applied microbiology, 2003-06, Vol.26 (2), p.177-181</ispartof><rights>2003 Urban & Fischer Verlag</rights><rights>2004 INIST-CNRS</rights><rights>Copyright Urban & Fischer Verlag Jun 2003</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c506t-e745963b3e377e951e98132f6283f56f800ab5c816dd2555d04969e8a98bb6063</citedby><cites>FETCH-LOGICAL-c506t-e745963b3e377e951e98132f6283f56f800ab5c816dd2555d04969e8a98bb6063</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0723202004701770$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=14888046$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12866843$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Finegold, Sydney M.</creatorcontrib><creatorcontrib>Vaisanen, Marja-Liisa</creatorcontrib><creatorcontrib>Molitoris, Denise R.</creatorcontrib><creatorcontrib>Tomzynski, Thomas J.</creatorcontrib><creatorcontrib>Song, Yuli</creatorcontrib><creatorcontrib>Liu, Chengxu</creatorcontrib><creatorcontrib>Collins, Matthew D.</creatorcontrib><creatorcontrib>Lawson, Paul A.</creatorcontrib><title>Cetobacterium somerae sp. nov. from Human Feces and Emended Description of the Genus Cetobacterium</title><title>Systematic and applied microbiology</title><addtitle>Syst Appl Microbiol</addtitle><description>Phenotypic and phylogenetic studies were performed on four isolates of an unidentified gram-negative, microaerotolerant, non-spore-forming, rod-shaped bacterium isolated from the feces of children. The unknown organism was bile resistant and produced acetic acid as the major end product of metabolism of peptides and carbohydrates. It possessed a low DNA G + C content of 31 mol %. Comparative 16S rRNA gene sequencing demonstrated that the four isolates were phylogenetically identical (100% 16S rRNA sequence similarity) and represent a hitherto unknown sub-line within the genus
Cetobacterium. The novel bacterium displayed approximately 5% sequence divergence with
Cetobacterium ceti, and can be readily distinguished from the latter by physiological and biochemical criteria. Based on phylogenetic and phenotypic evidence, it is proposed that the unknown fecal bacterium be classified in the genus
Cetobacterium, as
Cetobacterium somerae sp. nov. The proposed type strain of
Cetobacterium somerae is WAL 14325
T (ATCC BAA-474
T = CCUG 46254T).</description><subject>16S rRNA</subject><subject>Age of Onset</subject><subject>autism</subject><subject>Autistic Disorder - drug therapy</subject><subject>Autistic Disorder - epidemiology</subject><subject>Autistic Disorder - microbiology</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>Carbohydrate Metabolism</subject><subject>Cetobacterium somerae sp. nov</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - analysis</subject><subject>feces</subject><subject>Feces - microbiology</subject><subject>Fundamental and applied biological sciences. 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The unknown organism was bile resistant and produced acetic acid as the major end product of metabolism of peptides and carbohydrates. It possessed a low DNA G + C content of 31 mol %. Comparative 16S rRNA gene sequencing demonstrated that the four isolates were phylogenetically identical (100% 16S rRNA sequence similarity) and represent a hitherto unknown sub-line within the genus
Cetobacterium. The novel bacterium displayed approximately 5% sequence divergence with
Cetobacterium ceti, and can be readily distinguished from the latter by physiological and biochemical criteria. Based on phylogenetic and phenotypic evidence, it is proposed that the unknown fecal bacterium be classified in the genus
Cetobacterium, as
Cetobacterium somerae sp. nov. The proposed type strain of
Cetobacterium somerae is WAL 14325
T (ATCC BAA-474
T = CCUG 46254T).</abstract><cop>Jena</cop><pub>Elsevier GmbH</pub><pmid>12866843</pmid><doi>10.1078/072320203322346010</doi><tpages>5</tpages></addata></record> |
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| ispartof | Systematic and applied microbiology, 2003-06, Vol.26 (2), p.177-181 |
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| subjects | 16S rRNA Age of Onset autism Autistic Disorder - drug therapy Autistic Disorder - epidemiology Autistic Disorder - microbiology Bacterial Typing Techniques Base Composition Biological and medical sciences Carbohydrate Metabolism Cetobacterium somerae sp. nov Child Child, Preschool DNA, Bacterial - chemistry DNA, Bacterial - genetics Fatty Acids - analysis feces Feces - microbiology Fundamental and applied biological sciences. Psychology Gram-Negative Aerobic Rods and Cocci - classification Gram-Negative Aerobic Rods and Cocci - genetics Gram-Negative Aerobic Rods and Cocci - isolation & purification Growth, nutrition, metabolism, transports, enzymes. Molecular biology Humans Intestines - microbiology Male Microbiology Molecular Sequence Data Mycology Phenotype Phylogeny Ribotyping Species Specificity Systematics taxonomy Vancomycin - therapeutic use Virology |
| title | Cetobacterium somerae sp. nov. from Human Feces and Emended Description of the Genus Cetobacterium |
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