Complete DNA sequence and analysis of two cryptic plasmids isolated from Lactobacillus plantarum
The complete nucleotide sequence of two cryptic plasmids isolated from Lactobacillus plantarum strain AS1.2986 has been determined. The smaller plasmid, designated pLP2000, encodes a 37.0 kDa Rep protein and has a 17 bp sequence repeated 10 times. Sequence analysis of the larger plasmid, designated...
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| Veröffentlicht in: | Plasmid 2003-07, Vol.50 (1), p.70-73 |
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| creator | Daming, Ren Yinyu, Wang Zilai, Wang Jun, Cui Hekui, Lan Jingye, Zhou |
| description | The complete nucleotide sequence of two cryptic plasmids isolated from
Lactobacillus plantarum strain AS1.2986 has been determined. The smaller plasmid, designated pLP2000, encodes a 37.0
kDa Rep protein and has a 17
bp sequence repeated 10 times. Sequence analysis of the larger plasmid, designated pLP9000, revealed nine putative open reading frames (ORFs). Based on sequence similarity, ORF1 codes for a putative magnesium transporter protein that shows similarities to CorA from plasmid pCIS3 (
Lactococcus lactis). None of the nine ORFs shows similarity to any known Rep protein. Southern blot analysis indicates these two plasmids both replicate via a rolling circle (RC) mechanism. |
| doi_str_mv | 10.1016/S0147-619X(03)00010-6 |
| format | Article |
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Lactobacillus plantarum strain AS1.2986 has been determined. The smaller plasmid, designated pLP2000, encodes a 37.0
kDa Rep protein and has a 17
bp sequence repeated 10 times. Sequence analysis of the larger plasmid, designated pLP9000, revealed nine putative open reading frames (ORFs). Based on sequence similarity, ORF1 codes for a putative magnesium transporter protein that shows similarities to CorA from plasmid pCIS3 (
Lactococcus lactis). None of the nine ORFs shows similarity to any known Rep protein. Southern blot analysis indicates these two plasmids both replicate via a rolling circle (RC) mechanism.</description><identifier>ISSN: 0147-619X</identifier><identifier>EISSN: 1095-9890</identifier><identifier>DOI: 10.1016/S0147-619X(03)00010-6</identifier><identifier>PMID: 12826059</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Genetic Variation ; Lactobacillus - genetics ; Lactobacillus plantarum ; Lactococcus lactis - genetics ; Plasmid ; Plasmids - genetics ; Rolling circle replication ; Sequence Analysis, DNA ; Sequence Homology, Nucleic Acid</subject><ispartof>Plasmid, 2003-07, Vol.50 (1), p.70-73</ispartof><rights>2003</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c392t-1211c48dc9cec1abb21c4d9e0b913047bbbf036e1463728fced30ecb42501f0f3</citedby><cites>FETCH-LOGICAL-c392t-1211c48dc9cec1abb21c4d9e0b913047bbbf036e1463728fced30ecb42501f0f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0147619X03000106$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12826059$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Daming, Ren</creatorcontrib><creatorcontrib>Yinyu, Wang</creatorcontrib><creatorcontrib>Zilai, Wang</creatorcontrib><creatorcontrib>Jun, Cui</creatorcontrib><creatorcontrib>Hekui, Lan</creatorcontrib><creatorcontrib>Jingye, Zhou</creatorcontrib><title>Complete DNA sequence and analysis of two cryptic plasmids isolated from Lactobacillus plantarum</title><title>Plasmid</title><addtitle>Plasmid</addtitle><description>The complete nucleotide sequence of two cryptic plasmids isolated from
Lactobacillus plantarum strain AS1.2986 has been determined. The smaller plasmid, designated pLP2000, encodes a 37.0
kDa Rep protein and has a 17
bp sequence repeated 10 times. Sequence analysis of the larger plasmid, designated pLP9000, revealed nine putative open reading frames (ORFs). Based on sequence similarity, ORF1 codes for a putative magnesium transporter protein that shows similarities to CorA from plasmid pCIS3 (
Lactococcus lactis). None of the nine ORFs shows similarity to any known Rep protein. Southern blot analysis indicates these two plasmids both replicate via a rolling circle (RC) mechanism.</description><subject>Genetic Variation</subject><subject>Lactobacillus - genetics</subject><subject>Lactobacillus plantarum</subject><subject>Lactococcus lactis - genetics</subject><subject>Plasmid</subject><subject>Plasmids - genetics</subject><subject>Rolling circle replication</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology, Nucleic Acid</subject><issn>0147-619X</issn><issn>1095-9890</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1v1DAQhi0EotvCTwD5hOCQMrazTnxC1UKh0goOtBI344-JZJSsg-0U7b_H213BsYfRaKRnvt6XkFcMLhkw-f47sLZrJFM_3oJ4BwAMGvmErBiodaN6BU_J6h9yRs5z_lUhyZl8Ts4Y77mEtVqRn5s4zSMWpB-_XtGMvxfcOaRm52uYcZ9DpnGg5U-kLu3nEhydR5On4DMNOY6moKdDihPdGleiNS6M45IP0K6YtEwvyLPBjBlfnvIFubv-dLv50my_fb7ZXG0bJxQvDeOMubb3Tjl0zFjLa-kVglVMQNtZawcQElkrRcf7waEXgM62fA1sgEFckDfHuXOK9Ylc9BSyw7HegXHJuhMV7Xt4FGR9p3redRVcH0GXYs4JBz2nMJm01wz0wQP94IE-CKxB6AcPtKx9r08LFjuh_991Er0CH44AVj3uAyadXTjI7kNCV7SP4ZEVfwGNJ5fL</recordid><startdate>20030701</startdate><enddate>20030701</enddate><creator>Daming, Ren</creator><creator>Yinyu, Wang</creator><creator>Zilai, Wang</creator><creator>Jun, Cui</creator><creator>Hekui, Lan</creator><creator>Jingye, Zhou</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20030701</creationdate><title>Complete DNA sequence and analysis of two cryptic plasmids isolated from Lactobacillus plantarum</title><author>Daming, Ren ; Yinyu, Wang ; Zilai, Wang ; Jun, Cui ; Hekui, Lan ; Jingye, Zhou</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c392t-1211c48dc9cec1abb21c4d9e0b913047bbbf036e1463728fced30ecb42501f0f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Genetic Variation</topic><topic>Lactobacillus - genetics</topic><topic>Lactobacillus plantarum</topic><topic>Lactococcus lactis - genetics</topic><topic>Plasmid</topic><topic>Plasmids - genetics</topic><topic>Rolling circle replication</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Nucleic Acid</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Daming, Ren</creatorcontrib><creatorcontrib>Yinyu, Wang</creatorcontrib><creatorcontrib>Zilai, Wang</creatorcontrib><creatorcontrib>Jun, Cui</creatorcontrib><creatorcontrib>Hekui, Lan</creatorcontrib><creatorcontrib>Jingye, Zhou</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Plasmid</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Daming, Ren</au><au>Yinyu, Wang</au><au>Zilai, Wang</au><au>Jun, Cui</au><au>Hekui, Lan</au><au>Jingye, Zhou</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Complete DNA sequence and analysis of two cryptic plasmids isolated from Lactobacillus plantarum</atitle><jtitle>Plasmid</jtitle><addtitle>Plasmid</addtitle><date>2003-07-01</date><risdate>2003</risdate><volume>50</volume><issue>1</issue><spage>70</spage><epage>73</epage><pages>70-73</pages><issn>0147-619X</issn><eissn>1095-9890</eissn><abstract>The complete nucleotide sequence of two cryptic plasmids isolated from
Lactobacillus plantarum strain AS1.2986 has been determined. The smaller plasmid, designated pLP2000, encodes a 37.0
kDa Rep protein and has a 17
bp sequence repeated 10 times. Sequence analysis of the larger plasmid, designated pLP9000, revealed nine putative open reading frames (ORFs). Based on sequence similarity, ORF1 codes for a putative magnesium transporter protein that shows similarities to CorA from plasmid pCIS3 (
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| issn | 0147-619X 1095-9890 |
| language | eng |
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| source | MEDLINE; Elsevier ScienceDirect Journals |
| subjects | Genetic Variation Lactobacillus - genetics Lactobacillus plantarum Lactococcus lactis - genetics Plasmid Plasmids - genetics Rolling circle replication Sequence Analysis, DNA Sequence Homology, Nucleic Acid |
| title | Complete DNA sequence and analysis of two cryptic plasmids isolated from Lactobacillus plantarum |
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