Short communication: Polymorphism of casein cluster genes in Czech local goat breeds
The 4 casein loci were evaluated as haplotypes in 2 dairy goat breeds kept in the Czech Republic. Analysis of 41 White Shorthaired (WSH) trio families and 44 Brown Shorthaired (BSH) trio families revealed 14 and 20 haplotypes, respectively. Various genomic techniques were used to type the casein loc...
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| Veröffentlicht in: | Journal of dairy science 2009-12, Vol.92 (12), p.6197-6201 |
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| container_title | Journal of dairy science |
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| creator | Sztankóová, Z. Mátlová, V. Kyseľová, J. Jandurová, O.M. Říha, J. Senese, C. |
| description | The 4 casein loci were evaluated as haplotypes in 2 dairy goat breeds kept in the Czech Republic. Analysis of 41 White Shorthaired (WSH) trio families and 44 Brown Shorthaired (BSH) trio families revealed 14 and 20 haplotypes, respectively. Various genomic techniques were used to type the casein loci. Twenty-two different combinations of these alleles (casein haplotypes, in the order CSN1S1-CSN2-CSN1S2-CSN3) were found. Only 5 haplotypes in the WSH breed and 6 haplotypes in the BSH breed occurred at frequencies >0.05. For the WSH breed, the most common haplotype was FCFB (0.260), whereas for the BSH breed, the most common haplotype was FCFA (0.217). The information on the haplotype variability in both breeds could be used in breeding programs aimed at preserving biodiversity or selecting animals for specific protein production and cheesemaking. |
| doi_str_mv | 10.3168/jds.2008-1519 |
| format | Article |
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Analysis of 41 White Shorthaired (WSH) trio families and 44 Brown Shorthaired (BSH) trio families revealed 14 and 20 haplotypes, respectively. Various genomic techniques were used to type the casein loci. Twenty-two different combinations of these alleles (casein haplotypes, in the order CSN1S1-CSN2-CSN1S2-CSN3) were found. Only 5 haplotypes in the WSH breed and 6 haplotypes in the BSH breed occurred at frequencies >0.05. For the WSH breed, the most common haplotype was FCFB (0.260), whereas for the BSH breed, the most common haplotype was FCFA (0.217). The information on the haplotype variability in both breeds could be used in breeding programs aimed at preserving biodiversity or selecting animals for specific protein production and cheesemaking.</description><identifier>ISSN: 0022-0302</identifier><identifier>EISSN: 1525-3198</identifier><identifier>DOI: 10.3168/jds.2008-1519</identifier><identifier>PMID: 19923624</identifier><identifier>CODEN: JDSCAE</identifier><language>eng</language><publisher>New York, NY: Elsevier Inc</publisher><subject>Animal productions ; Animals ; Biological and medical sciences ; Breeding ; casein ; casein haplotype ; Caseins - genetics ; Czech Republic ; Female ; Food industries ; Fundamental and applied biological sciences. Psychology ; Gene Frequency ; genes ; genetic polymorphism ; genetic variation ; genomics ; goat ; goat breeds ; goats ; Goats - genetics ; haplotypes ; loci ; Male ; Milk and cheese industries. Ice creams ; Multigene Family - genetics ; Polymorphism, Genetic - genetics ; Terrestrial animal productions ; Vertebrates</subject><ispartof>Journal of dairy science, 2009-12, Vol.92 (12), p.6197-6201</ispartof><rights>2009 American Dairy Science Association</rights><rights>2015 INIST-CNRS</rights><rights>Copyright American Dairy Science Association Dec 2009</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c422t-26449dc1b6b358ccbdd324420999fb380c66ad1fb1304e3ced018333d7766b873</citedby><cites>FETCH-LOGICAL-c422t-26449dc1b6b358ccbdd324420999fb380c66ad1fb1304e3ced018333d7766b873</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.3168/jds.2008-1519$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=22184731$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19923624$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sztankóová, Z.</creatorcontrib><creatorcontrib>Mátlová, V.</creatorcontrib><creatorcontrib>Kyseľová, J.</creatorcontrib><creatorcontrib>Jandurová, O.M.</creatorcontrib><creatorcontrib>Říha, J.</creatorcontrib><creatorcontrib>Senese, C.</creatorcontrib><title>Short communication: Polymorphism of casein cluster genes in Czech local goat breeds</title><title>Journal of dairy science</title><addtitle>J Dairy Sci</addtitle><description>The 4 casein loci were evaluated as haplotypes in 2 dairy goat breeds kept in the Czech Republic. Analysis of 41 White Shorthaired (WSH) trio families and 44 Brown Shorthaired (BSH) trio families revealed 14 and 20 haplotypes, respectively. Various genomic techniques were used to type the casein loci. Twenty-two different combinations of these alleles (casein haplotypes, in the order CSN1S1-CSN2-CSN1S2-CSN3) were found. Only 5 haplotypes in the WSH breed and 6 haplotypes in the BSH breed occurred at frequencies >0.05. For the WSH breed, the most common haplotype was FCFB (0.260), whereas for the BSH breed, the most common haplotype was FCFA (0.217). The information on the haplotype variability in both breeds could be used in breeding programs aimed at preserving biodiversity or selecting animals for specific protein production and cheesemaking.</description><subject>Animal productions</subject><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>Breeding</subject><subject>casein</subject><subject>casein haplotype</subject><subject>Caseins - genetics</subject><subject>Czech Republic</subject><subject>Female</subject><subject>Food industries</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Frequency</subject><subject>genes</subject><subject>genetic polymorphism</subject><subject>genetic variation</subject><subject>genomics</subject><subject>goat</subject><subject>goat breeds</subject><subject>goats</subject><subject>Goats - genetics</subject><subject>haplotypes</subject><subject>loci</subject><subject>Male</subject><subject>Milk and cheese industries. Ice creams</subject><subject>Multigene Family - genetics</subject><subject>Polymorphism, Genetic - genetics</subject><subject>Terrestrial animal productions</subject><subject>Vertebrates</subject><issn>0022-0302</issn><issn>1525-3198</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kM-L1DAYQIMo7rh69KpBWDx1zZekabI3GdYfsKCwu-eQJuk0Q9uMSausf70pM7ggeAoJj5fvewi9BnLJQMgPe5cvKSGyghrUE7SBmtYVAyWfog0hlFaEEXqGXuS8L1egpH6OzkApygTlG3R328c0YxvHcZmCNXOI0xX-HoeHMaZDH_KIY4etyT5M2A5Lnn3COz_5jMvD9re3PR6iNQPeRTPjNnnv8kv0rDND9q9O5zm6_3R9t_1S3Xz7_HX78aaynNK5ooJz5Sy0omW1tLZ1jlHOKVFKdS2TxAphHHQtMMI9s94RkIwx1zRCtLJh5-j90XtI8cfi86zHkK0fBjP5uGTdMA5cFGch3_1D7uOSpjKcBlXLhkC96qojZFPMOflOH1IYTXrQQPQaW5fYeo2t19iFf3OSLu3o3SN9qluAixNgcknUJTPZkP9ylILkDYPHPfqw63-F5HUezTAULaxfKqqBagFqHfHtkexM1GaXiu3-lpISCBpSl3aFaI6EL-F_Bp90tsFPJV7x2lm7GP6zzh9bj685</recordid><startdate>20091201</startdate><enddate>20091201</enddate><creator>Sztankóová, Z.</creator><creator>Mátlová, V.</creator><creator>Kyseľová, J.</creator><creator>Jandurová, O.M.</creator><creator>Říha, J.</creator><creator>Senese, C.</creator><general>Elsevier Inc</general><general>American Dairy Science Association</general><general>Am Dairy Sci Assoc</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L6V</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7S</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>S0X</scope><scope>7X8</scope></search><sort><creationdate>20091201</creationdate><title>Short communication: Polymorphism of casein cluster genes in Czech local goat breeds</title><author>Sztankóová, Z. ; Mátlová, V. ; Kyseľová, J. ; Jandurová, O.M. ; Říha, J. ; Senese, C.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c422t-26449dc1b6b358ccbdd324420999fb380c66ad1fb1304e3ced018333d7766b873</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Animal productions</topic><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>Breeding</topic><topic>casein</topic><topic>casein haplotype</topic><topic>Caseins - genetics</topic><topic>Czech Republic</topic><topic>Female</topic><topic>Food industries</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Frequency</topic><topic>genes</topic><topic>genetic polymorphism</topic><topic>genetic variation</topic><topic>genomics</topic><topic>goat</topic><topic>goat breeds</topic><topic>goats</topic><topic>Goats - genetics</topic><topic>haplotypes</topic><topic>loci</topic><topic>Male</topic><topic>Milk and cheese industries. Ice creams</topic><topic>Multigene Family - genetics</topic><topic>Polymorphism, Genetic - genetics</topic><topic>Terrestrial animal productions</topic><topic>Vertebrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sztankóová, Z.</creatorcontrib><creatorcontrib>Mátlová, V.</creatorcontrib><creatorcontrib>Kyseľová, J.</creatorcontrib><creatorcontrib>Jandurová, O.M.</creatorcontrib><creatorcontrib>Říha, J.</creatorcontrib><creatorcontrib>Senese, C.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Engineering Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Engineering Database</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>Environmental Science Collection</collection><collection>SIRS Editorial</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of dairy science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sztankóová, Z.</au><au>Mátlová, V.</au><au>Kyseľová, J.</au><au>Jandurová, O.M.</au><au>Říha, J.</au><au>Senese, C.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Short communication: Polymorphism of casein cluster genes in Czech local goat breeds</atitle><jtitle>Journal of dairy science</jtitle><addtitle>J Dairy Sci</addtitle><date>2009-12-01</date><risdate>2009</risdate><volume>92</volume><issue>12</issue><spage>6197</spage><epage>6201</epage><pages>6197-6201</pages><issn>0022-0302</issn><eissn>1525-3198</eissn><coden>JDSCAE</coden><abstract>The 4 casein loci were evaluated as haplotypes in 2 dairy goat breeds kept in the Czech Republic. Analysis of 41 White Shorthaired (WSH) trio families and 44 Brown Shorthaired (BSH) trio families revealed 14 and 20 haplotypes, respectively. Various genomic techniques were used to type the casein loci. Twenty-two different combinations of these alleles (casein haplotypes, in the order CSN1S1-CSN2-CSN1S2-CSN3) were found. Only 5 haplotypes in the WSH breed and 6 haplotypes in the BSH breed occurred at frequencies >0.05. For the WSH breed, the most common haplotype was FCFB (0.260), whereas for the BSH breed, the most common haplotype was FCFA (0.217). The information on the haplotype variability in both breeds could be used in breeding programs aimed at preserving biodiversity or selecting animals for specific protein production and cheesemaking.</abstract><cop>New York, NY</cop><pub>Elsevier Inc</pub><pmid>19923624</pmid><doi>10.3168/jds.2008-1519</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Animal productions Animals Biological and medical sciences Breeding casein casein haplotype Caseins - genetics Czech Republic Female Food industries Fundamental and applied biological sciences. Psychology Gene Frequency genes genetic polymorphism genetic variation genomics goat goat breeds goats Goats - genetics haplotypes loci Male Milk and cheese industries. Ice creams Multigene Family - genetics Polymorphism, Genetic - genetics Terrestrial animal productions Vertebrates |
| title | Short communication: Polymorphism of casein cluster genes in Czech local goat breeds |
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