Determination of Carbohydrate-Binding Preferences of Human Galectins with Carbohydrate Microarrays
Galectins are a class of carbohydrate‐binding proteins named for their galactose‐binding preference and are involved in a host of processes ranging from homeostasis of organisms to immune responses. As a first step towards correlating the carbohydrate‐binding preferences of the different galectins w...
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Veröffentlicht in: | Chembiochem : a European journal of chemical biology 2010-07, Vol.11 (11), p.1563-1573 |
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creator | Horlacher , Tim Oberli , Matthias A. Werz , Daniel B. Kröck , Lenz Bufali, Simone Mishra, Rashmi Sobek, Jens Simons, Kai Hirashima, Mitsuomi Niki, Toshiro Seeberger, Peter H. |
description | Galectins are a class of carbohydrate‐binding proteins named for their galactose‐binding preference and are involved in a host of processes ranging from homeostasis of organisms to immune responses. As a first step towards correlating the carbohydrate‐binding preferences of the different galectins with their biological functions, we determined carbohydrate recognition fine‐specificities of galectins with the aid of carbohydrate microarrays. A focused set of oligosaccharides considered relevant to galectins was prepared by chemical synthesis. Structure–activity relationships for galectin–sugar interactions were determined, and these helped in the establishment of redundant and specific galectin actions by comparison of binding preferences. Distinct glycosylations on the basic lactosyl motifs proved to be key to galectin binding regulation—and therefore galectin action—as either high‐affinity ligands are produced or binding is blocked. High‐affinity ligands such as the blood group antigens that presumably mediate particular functions were identified.
Galectin Quest: Galactosides were chemically synthesized and printed onto microarray slides to determine the binding preferences of the major human galectins. Comparison of the binding patterns allowed common and unique binding motifs to be established. Sugar residues vicinal to the common galectin‐binding motifs affected binding drastically and proved to be most important for the generation of specificity. |
doi_str_mv | 10.1002/cbic.201000020 |
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Galectin Quest: Galactosides were chemically synthesized and printed onto microarray slides to determine the binding preferences of the major human galectins. Comparison of the binding patterns allowed common and unique binding motifs to be established. Sugar residues vicinal to the common galectin‐binding motifs affected binding drastically and proved to be most important for the generation of specificity.</description><identifier>ISSN: 1439-4227</identifier><identifier>EISSN: 1439-7633</identifier><identifier>DOI: 10.1002/cbic.201000020</identifier><identifier>PMID: 20572248</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Blood Group Antigens - metabolism ; carbohydrate chemistry ; carbohydrate microarrays ; carbohydrates ; Carbohydrates - chemistry ; galectins ; Galectins - metabolism ; glycan binding ; Humans ; lectins ; Microarray Analysis ; Oligosaccharides - chemical synthesis ; Oligosaccharides - metabolism ; Protein Binding ; Structure-Activity Relationship</subject><ispartof>Chembiochem : a European journal of chemical biology, 2010-07, Vol.11 (11), p.1563-1573</ispartof><rights>Copyright © 2010 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3820-9668bfc600f8227420e37888f4980d401218faa68076ebe7083863a0530155b73</citedby><cites>FETCH-LOGICAL-c3820-9668bfc600f8227420e37888f4980d401218faa68076ebe7083863a0530155b73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fcbic.201000020$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fcbic.201000020$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20572248$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Horlacher , Tim</creatorcontrib><creatorcontrib>Oberli , Matthias A.</creatorcontrib><creatorcontrib>Werz , Daniel B.</creatorcontrib><creatorcontrib>Kröck , Lenz</creatorcontrib><creatorcontrib>Bufali, Simone</creatorcontrib><creatorcontrib>Mishra, Rashmi</creatorcontrib><creatorcontrib>Sobek, Jens</creatorcontrib><creatorcontrib>Simons, Kai</creatorcontrib><creatorcontrib>Hirashima, Mitsuomi</creatorcontrib><creatorcontrib>Niki, Toshiro</creatorcontrib><creatorcontrib>Seeberger, Peter H.</creatorcontrib><title>Determination of Carbohydrate-Binding Preferences of Human Galectins with Carbohydrate Microarrays</title><title>Chembiochem : a European journal of chemical biology</title><addtitle>ChemBioChem</addtitle><description>Galectins are a class of carbohydrate‐binding proteins named for their galactose‐binding preference and are involved in a host of processes ranging from homeostasis of organisms to immune responses. As a first step towards correlating the carbohydrate‐binding preferences of the different galectins with their biological functions, we determined carbohydrate recognition fine‐specificities of galectins with the aid of carbohydrate microarrays. A focused set of oligosaccharides considered relevant to galectins was prepared by chemical synthesis. Structure–activity relationships for galectin–sugar interactions were determined, and these helped in the establishment of redundant and specific galectin actions by comparison of binding preferences. Distinct glycosylations on the basic lactosyl motifs proved to be key to galectin binding regulation—and therefore galectin action—as either high‐affinity ligands are produced or binding is blocked. High‐affinity ligands such as the blood group antigens that presumably mediate particular functions were identified.
Galectin Quest: Galactosides were chemically synthesized and printed onto microarray slides to determine the binding preferences of the major human galectins. Comparison of the binding patterns allowed common and unique binding motifs to be established. Sugar residues vicinal to the common galectin‐binding motifs affected binding drastically and proved to be most important for the generation of specificity.</description><subject>Blood Group Antigens - metabolism</subject><subject>carbohydrate chemistry</subject><subject>carbohydrate microarrays</subject><subject>carbohydrates</subject><subject>Carbohydrates - chemistry</subject><subject>galectins</subject><subject>Galectins - metabolism</subject><subject>glycan binding</subject><subject>Humans</subject><subject>lectins</subject><subject>Microarray Analysis</subject><subject>Oligosaccharides - chemical synthesis</subject><subject>Oligosaccharides - metabolism</subject><subject>Protein Binding</subject><subject>Structure-Activity Relationship</subject><issn>1439-4227</issn><issn>1439-7633</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE2P0zAQhi3EipaFK0eUG6eUsZ3YznEboO1qt4AE6movlpNMqJd8LHaq0n-Pq5RqOXHyWHreRzMvIW8ozCgAe18WtpwxCHP4wTMypQnPYik4f36aE8bkhLz0_iEgmeD0BZkwSCVjiZqS4gMO6FrbmcH2XdTXUW5c0W8PlTMDxnPbVbb7EX1xWKPDrkR_ZJa71nTRwjRYDrbz0d4O23-C0a0tXW-cMwf_ilzUpvH4-vReku-fPn7Ll_HN58Uqv7qJS64YxJkQqqhLAVCrsHLCALlUStVJpqBKgDKqamOEAimwQAmKK8ENpBxomhaSX5J3o_fR9b926AfdWl9i05gO-53XkgcJp5QHcjaSYUfvw2n60dnWuIOmoI-16mOt-lxrCLw9qXdFi9UZ_9tjALIR2NsGD__R6Xy-yp_K4zFr_YC_z1njfmohuUz1Zr3QCd_cbe6v1_or_wPEM5Jf</recordid><startdate>20100726</startdate><enddate>20100726</enddate><creator>Horlacher , Tim</creator><creator>Oberli , Matthias A.</creator><creator>Werz , Daniel B.</creator><creator>Kröck , Lenz</creator><creator>Bufali, Simone</creator><creator>Mishra, Rashmi</creator><creator>Sobek, Jens</creator><creator>Simons, Kai</creator><creator>Hirashima, Mitsuomi</creator><creator>Niki, Toshiro</creator><creator>Seeberger, Peter H.</creator><general>WILEY-VCH Verlag</general><general>WILEY‐VCH Verlag</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20100726</creationdate><title>Determination of Carbohydrate-Binding Preferences of Human Galectins with Carbohydrate Microarrays</title><author>Horlacher , Tim ; Oberli , Matthias A. ; Werz , Daniel B. ; Kröck , Lenz ; Bufali, Simone ; Mishra, Rashmi ; Sobek, Jens ; Simons, Kai ; Hirashima, Mitsuomi ; Niki, Toshiro ; Seeberger, Peter H.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3820-9668bfc600f8227420e37888f4980d401218faa68076ebe7083863a0530155b73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Blood Group Antigens - metabolism</topic><topic>carbohydrate chemistry</topic><topic>carbohydrate microarrays</topic><topic>carbohydrates</topic><topic>Carbohydrates - chemistry</topic><topic>galectins</topic><topic>Galectins - metabolism</topic><topic>glycan binding</topic><topic>Humans</topic><topic>lectins</topic><topic>Microarray Analysis</topic><topic>Oligosaccharides - chemical synthesis</topic><topic>Oligosaccharides - metabolism</topic><topic>Protein Binding</topic><topic>Structure-Activity Relationship</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Horlacher , Tim</creatorcontrib><creatorcontrib>Oberli , Matthias A.</creatorcontrib><creatorcontrib>Werz , Daniel B.</creatorcontrib><creatorcontrib>Kröck , Lenz</creatorcontrib><creatorcontrib>Bufali, Simone</creatorcontrib><creatorcontrib>Mishra, Rashmi</creatorcontrib><creatorcontrib>Sobek, Jens</creatorcontrib><creatorcontrib>Simons, Kai</creatorcontrib><creatorcontrib>Hirashima, Mitsuomi</creatorcontrib><creatorcontrib>Niki, Toshiro</creatorcontrib><creatorcontrib>Seeberger, Peter H.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Chembiochem : a European journal of chemical biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Horlacher , Tim</au><au>Oberli , Matthias A.</au><au>Werz , Daniel B.</au><au>Kröck , Lenz</au><au>Bufali, Simone</au><au>Mishra, Rashmi</au><au>Sobek, Jens</au><au>Simons, Kai</au><au>Hirashima, Mitsuomi</au><au>Niki, Toshiro</au><au>Seeberger, Peter H.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Determination of Carbohydrate-Binding Preferences of Human Galectins with Carbohydrate Microarrays</atitle><jtitle>Chembiochem : a European journal of chemical biology</jtitle><addtitle>ChemBioChem</addtitle><date>2010-07-26</date><risdate>2010</risdate><volume>11</volume><issue>11</issue><spage>1563</spage><epage>1573</epage><pages>1563-1573</pages><issn>1439-4227</issn><eissn>1439-7633</eissn><abstract>Galectins are a class of carbohydrate‐binding proteins named for their galactose‐binding preference and are involved in a host of processes ranging from homeostasis of organisms to immune responses. As a first step towards correlating the carbohydrate‐binding preferences of the different galectins with their biological functions, we determined carbohydrate recognition fine‐specificities of galectins with the aid of carbohydrate microarrays. A focused set of oligosaccharides considered relevant to galectins was prepared by chemical synthesis. Structure–activity relationships for galectin–sugar interactions were determined, and these helped in the establishment of redundant and specific galectin actions by comparison of binding preferences. Distinct glycosylations on the basic lactosyl motifs proved to be key to galectin binding regulation—and therefore galectin action—as either high‐affinity ligands are produced or binding is blocked. High‐affinity ligands such as the blood group antigens that presumably mediate particular functions were identified.
Galectin Quest: Galactosides were chemically synthesized and printed onto microarray slides to determine the binding preferences of the major human galectins. Comparison of the binding patterns allowed common and unique binding motifs to be established. Sugar residues vicinal to the common galectin‐binding motifs affected binding drastically and proved to be most important for the generation of specificity.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><pmid>20572248</pmid><doi>10.1002/cbic.201000020</doi><tpages>11</tpages></addata></record> |
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subjects | Blood Group Antigens - metabolism carbohydrate chemistry carbohydrate microarrays carbohydrates Carbohydrates - chemistry galectins Galectins - metabolism glycan binding Humans lectins Microarray Analysis Oligosaccharides - chemical synthesis Oligosaccharides - metabolism Protein Binding Structure-Activity Relationship |
title | Determination of Carbohydrate-Binding Preferences of Human Galectins with Carbohydrate Microarrays |
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