Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis
Objective Group IVA cytosolic phospholipase A 2 (cPLA 2 α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between cPLA 2 α gene polymorphisms and phenotypic features of patients w...
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creator | Umeno, Junji Matsumoto, Takayuki Esaki, Motohiro Kukita, Yoji Tahira, Tomoko Yanaru-Fujisawa, Ritsuko Nakamura, Shotaro Arima, Hisatomi Hirahashi, Minako Hayashi, Kenshi Iida, Mitsuo |
description | Objective
Group IVA cytosolic phospholipase A
2
(cPLA
2
α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between
cPLA
2
α gene polymorphisms and phenotypic features of patients with familial adenomatous polyposis (FAP).
Patients and Methods
A tag single nucleotide polymorphisms (SNPs)-based genotype–phenotype association study of the
cPLA
2
α gene was conducted in 73 Japanese patients from 59 families with FAP. Based on the HapMap database, seven tag SNPs of the
cPLA
2
α gene were selected and genotyped by direct sequencing analysis. The genotype–phenotype association in relation to the
adenomatous polyposis coli
(
APC
) gene mutation was also assessed.
Results
The single SNP analysis showed that rs3820185 C allele [odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2–4.9] and rs127446200 GG genotype (OR, 10.9; 95%CI, 1.6–69.8), were more frequent in patients with gastric fundic gland polyposis (FGP) than in those without. Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4;
p
= 0.008). This association was also significant when adjusted for covariates (age, sex, and
APC
mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2;
p
= 0.027).
Conclusions
The
cPLA
2
α gene may be a possible disease modifier gene in FAP. |
doi_str_mv | 10.1007/s00384-009-0808-x |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_733867049</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>733867049</sourcerecordid><originalsourceid>FETCH-LOGICAL-p128x-aaefa23e4b2ec8ce78ed7c65a2db67a48e4dc4de0764214a878d451116b2f63</originalsourceid><addsrcrecordid>eNo9kctu2zAQRYmiReOk_YBuCm6KrtSSFCVSSyPow0CALBpkS4ypkc1AElmNhNp_kM8uXTtdEANiztx5XMY-SPFFCmG-khCl1YUQTSGssMXhFVtJXapCqlq9ZishTVPIprJX7JroSeR_bfRbdiUb01RSNSv2vBkS-JnHju-muCS-eVxzf5wjxT54nvaR8utDAkK-VnyHI_IU--MQp7QPNBCPY8ZwjPMx5YoOYV4mpJNigjngOBP_E-Y972AIfYCeQ5vpAea40D-pFCnQO_amg57w_SXesF_fvz3c_izu7n9sbtd3RZLKHgoA7ECVqLcKvfVoLLbG1xWodlsb0BZ163WLwtRaSQ3W2FZXUsp6q7q6vGGfz6ppir8XpNkNgTz2PYyYx3GmLG1thG4y-fFCLtsBW5emMMB0dC-ny8CnCwDkoe8mGH2g_5xSWjS2OrVUZ45yatzh5J7iMo15RyeFO_nozj667KM7-egO5V9AqZH3</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>733867049</pqid></control><display><type>article</type><title>Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis</title><source>MEDLINE</source><source>SpringerLink Journals - AutoHoldings</source><creator>Umeno, Junji ; Matsumoto, Takayuki ; Esaki, Motohiro ; Kukita, Yoji ; Tahira, Tomoko ; Yanaru-Fujisawa, Ritsuko ; Nakamura, Shotaro ; Arima, Hisatomi ; Hirahashi, Minako ; Hayashi, Kenshi ; Iida, Mitsuo</creator><creatorcontrib>Umeno, Junji ; Matsumoto, Takayuki ; Esaki, Motohiro ; Kukita, Yoji ; Tahira, Tomoko ; Yanaru-Fujisawa, Ritsuko ; Nakamura, Shotaro ; Arima, Hisatomi ; Hirahashi, Minako ; Hayashi, Kenshi ; Iida, Mitsuo</creatorcontrib><description>Objective
Group IVA cytosolic phospholipase A
2
(cPLA
2
α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between
cPLA
2
α gene polymorphisms and phenotypic features of patients with familial adenomatous polyposis (FAP).
Patients and Methods
A tag single nucleotide polymorphisms (SNPs)-based genotype–phenotype association study of the
cPLA
2
α gene was conducted in 73 Japanese patients from 59 families with FAP. Based on the HapMap database, seven tag SNPs of the
cPLA
2
α gene were selected and genotyped by direct sequencing analysis. The genotype–phenotype association in relation to the
adenomatous polyposis coli
(
APC
) gene mutation was also assessed.
Results
The single SNP analysis showed that rs3820185 C allele [odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2–4.9] and rs127446200 GG genotype (OR, 10.9; 95%CI, 1.6–69.8), were more frequent in patients with gastric fundic gland polyposis (FGP) than in those without. Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4;
p
= 0.008). This association was also significant when adjusted for covariates (age, sex, and
APC
mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2;
p
= 0.027).
Conclusions
The
cPLA
2
α gene may be a possible disease modifier gene in FAP.</description><identifier>ISSN: 0179-1958</identifier><identifier>EISSN: 1432-1262</identifier><identifier>DOI: 10.1007/s00384-009-0808-x</identifier><identifier>PMID: 19795129</identifier><identifier>CODEN: IJCDE6</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Adenomatous Polyposis Coli - enzymology ; Adenomatous Polyposis Coli - genetics ; Adenomatous Polyposis Coli - pathology ; Adenomatous Polyposis Coli Protein - genetics ; Adolescent ; Adult ; Aged ; Alleles ; Biological and medical sciences ; Child ; Female ; Gastroenterology ; Gastroenterology. Liver. Pancreas. Abdomen ; Genetic Predisposition to Disease ; Group IV Phospholipases A2 - genetics ; Haplotypes - genetics ; Hepatology ; Humans ; Internal Medicine ; Male ; Medical sciences ; Medicine ; Medicine & Public Health ; Middle Aged ; Mutation - genetics ; Original Article ; Phenotype ; Polymorphism, Single Nucleotide - genetics ; Proctology ; Stomach. Duodenum. Small intestine. Colon. Rectum. Anus ; Surgery ; Tumors ; Young Adult</subject><ispartof>International journal of colorectal disease, 2010-03, Vol.25 (3), p.293-301</ispartof><rights>Springer-Verlag 2009</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-p128x-aaefa23e4b2ec8ce78ed7c65a2db67a48e4dc4de0764214a878d451116b2f63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00384-009-0808-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00384-009-0808-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=22409856$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19795129$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Umeno, Junji</creatorcontrib><creatorcontrib>Matsumoto, Takayuki</creatorcontrib><creatorcontrib>Esaki, Motohiro</creatorcontrib><creatorcontrib>Kukita, Yoji</creatorcontrib><creatorcontrib>Tahira, Tomoko</creatorcontrib><creatorcontrib>Yanaru-Fujisawa, Ritsuko</creatorcontrib><creatorcontrib>Nakamura, Shotaro</creatorcontrib><creatorcontrib>Arima, Hisatomi</creatorcontrib><creatorcontrib>Hirahashi, Minako</creatorcontrib><creatorcontrib>Hayashi, Kenshi</creatorcontrib><creatorcontrib>Iida, Mitsuo</creatorcontrib><title>Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis</title><title>International journal of colorectal disease</title><addtitle>Int J Colorectal Dis</addtitle><addtitle>Int J Colorectal Dis</addtitle><description>Objective
Group IVA cytosolic phospholipase A
2
(cPLA
2
α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between
cPLA
2
α gene polymorphisms and phenotypic features of patients with familial adenomatous polyposis (FAP).
Patients and Methods
A tag single nucleotide polymorphisms (SNPs)-based genotype–phenotype association study of the
cPLA
2
α gene was conducted in 73 Japanese patients from 59 families with FAP. Based on the HapMap database, seven tag SNPs of the
cPLA
2
α gene were selected and genotyped by direct sequencing analysis. The genotype–phenotype association in relation to the
adenomatous polyposis coli
(
APC
) gene mutation was also assessed.
Results
The single SNP analysis showed that rs3820185 C allele [odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2–4.9] and rs127446200 GG genotype (OR, 10.9; 95%CI, 1.6–69.8), were more frequent in patients with gastric fundic gland polyposis (FGP) than in those without. Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4;
p
= 0.008). This association was also significant when adjusted for covariates (age, sex, and
APC
mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2;
p
= 0.027).
Conclusions
The
cPLA
2
α gene may be a possible disease modifier gene in FAP.</description><subject>Adenomatous Polyposis Coli - enzymology</subject><subject>Adenomatous Polyposis Coli - genetics</subject><subject>Adenomatous Polyposis Coli - pathology</subject><subject>Adenomatous Polyposis Coli Protein - genetics</subject><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Alleles</subject><subject>Biological and medical sciences</subject><subject>Child</subject><subject>Female</subject><subject>Gastroenterology</subject><subject>Gastroenterology. Liver. Pancreas. Abdomen</subject><subject>Genetic Predisposition to Disease</subject><subject>Group IV Phospholipases A2 - genetics</subject><subject>Haplotypes - genetics</subject><subject>Hepatology</subject><subject>Humans</subject><subject>Internal Medicine</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>Middle Aged</subject><subject>Mutation - genetics</subject><subject>Original Article</subject><subject>Phenotype</subject><subject>Polymorphism, Single Nucleotide - genetics</subject><subject>Proctology</subject><subject>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</subject><subject>Surgery</subject><subject>Tumors</subject><subject>Young Adult</subject><issn>0179-1958</issn><issn>1432-1262</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kctu2zAQRYmiReOk_YBuCm6KrtSSFCVSSyPow0CALBpkS4ypkc1AElmNhNp_kM8uXTtdEANiztx5XMY-SPFFCmG-khCl1YUQTSGssMXhFVtJXapCqlq9ZishTVPIprJX7JroSeR_bfRbdiUb01RSNSv2vBkS-JnHju-muCS-eVxzf5wjxT54nvaR8utDAkK-VnyHI_IU--MQp7QPNBCPY8ZwjPMx5YoOYV4mpJNigjngOBP_E-Y972AIfYCeQ5vpAea40D-pFCnQO_amg57w_SXesF_fvz3c_izu7n9sbtd3RZLKHgoA7ECVqLcKvfVoLLbG1xWodlsb0BZ163WLwtRaSQ3W2FZXUsp6q7q6vGGfz6ppir8XpNkNgTz2PYyYx3GmLG1thG4y-fFCLtsBW5emMMB0dC-ny8CnCwDkoe8mGH2g_5xSWjS2OrVUZ45yatzh5J7iMo15RyeFO_nozj667KM7-egO5V9AqZH3</recordid><startdate>201003</startdate><enddate>201003</enddate><creator>Umeno, Junji</creator><creator>Matsumoto, Takayuki</creator><creator>Esaki, Motohiro</creator><creator>Kukita, Yoji</creator><creator>Tahira, Tomoko</creator><creator>Yanaru-Fujisawa, Ritsuko</creator><creator>Nakamura, Shotaro</creator><creator>Arima, Hisatomi</creator><creator>Hirahashi, Minako</creator><creator>Hayashi, Kenshi</creator><creator>Iida, Mitsuo</creator><general>Springer-Verlag</general><general>Springer</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>201003</creationdate><title>Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis</title><author>Umeno, Junji ; Matsumoto, Takayuki ; Esaki, Motohiro ; Kukita, Yoji ; Tahira, Tomoko ; Yanaru-Fujisawa, Ritsuko ; Nakamura, Shotaro ; Arima, Hisatomi ; Hirahashi, Minako ; Hayashi, Kenshi ; Iida, Mitsuo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p128x-aaefa23e4b2ec8ce78ed7c65a2db67a48e4dc4de0764214a878d451116b2f63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Adenomatous Polyposis Coli - enzymology</topic><topic>Adenomatous Polyposis Coli - genetics</topic><topic>Adenomatous Polyposis Coli - pathology</topic><topic>Adenomatous Polyposis Coli Protein - genetics</topic><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Alleles</topic><topic>Biological and medical sciences</topic><topic>Child</topic><topic>Female</topic><topic>Gastroenterology</topic><topic>Gastroenterology. Liver. Pancreas. Abdomen</topic><topic>Genetic Predisposition to Disease</topic><topic>Group IV Phospholipases A2 - genetics</topic><topic>Haplotypes - genetics</topic><topic>Hepatology</topic><topic>Humans</topic><topic>Internal Medicine</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Medicine</topic><topic>Medicine & Public Health</topic><topic>Middle Aged</topic><topic>Mutation - genetics</topic><topic>Original Article</topic><topic>Phenotype</topic><topic>Polymorphism, Single Nucleotide - genetics</topic><topic>Proctology</topic><topic>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</topic><topic>Surgery</topic><topic>Tumors</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Umeno, Junji</creatorcontrib><creatorcontrib>Matsumoto, Takayuki</creatorcontrib><creatorcontrib>Esaki, Motohiro</creatorcontrib><creatorcontrib>Kukita, Yoji</creatorcontrib><creatorcontrib>Tahira, Tomoko</creatorcontrib><creatorcontrib>Yanaru-Fujisawa, Ritsuko</creatorcontrib><creatorcontrib>Nakamura, Shotaro</creatorcontrib><creatorcontrib>Arima, Hisatomi</creatorcontrib><creatorcontrib>Hirahashi, Minako</creatorcontrib><creatorcontrib>Hayashi, Kenshi</creatorcontrib><creatorcontrib>Iida, Mitsuo</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of colorectal disease</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Umeno, Junji</au><au>Matsumoto, Takayuki</au><au>Esaki, Motohiro</au><au>Kukita, Yoji</au><au>Tahira, Tomoko</au><au>Yanaru-Fujisawa, Ritsuko</au><au>Nakamura, Shotaro</au><au>Arima, Hisatomi</au><au>Hirahashi, Minako</au><au>Hayashi, Kenshi</au><au>Iida, Mitsuo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis</atitle><jtitle>International journal of colorectal disease</jtitle><stitle>Int J Colorectal Dis</stitle><addtitle>Int J Colorectal Dis</addtitle><date>2010-03</date><risdate>2010</risdate><volume>25</volume><issue>3</issue><spage>293</spage><epage>301</epage><pages>293-301</pages><issn>0179-1958</issn><eissn>1432-1262</eissn><coden>IJCDE6</coden><abstract>Objective
Group IVA cytosolic phospholipase A
2
(cPLA
2
α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between
cPLA
2
α gene polymorphisms and phenotypic features of patients with familial adenomatous polyposis (FAP).
Patients and Methods
A tag single nucleotide polymorphisms (SNPs)-based genotype–phenotype association study of the
cPLA
2
α gene was conducted in 73 Japanese patients from 59 families with FAP. Based on the HapMap database, seven tag SNPs of the
cPLA
2
α gene were selected and genotyped by direct sequencing analysis. The genotype–phenotype association in relation to the
adenomatous polyposis coli
(
APC
) gene mutation was also assessed.
Results
The single SNP analysis showed that rs3820185 C allele [odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2–4.9] and rs127446200 GG genotype (OR, 10.9; 95%CI, 1.6–69.8), were more frequent in patients with gastric fundic gland polyposis (FGP) than in those without. Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4;
p
= 0.008). This association was also significant when adjusted for covariates (age, sex, and
APC
mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2;
p
= 0.027).
Conclusions
The
cPLA
2
α gene may be a possible disease modifier gene in FAP.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>19795129</pmid><doi>10.1007/s00384-009-0808-x</doi><tpages>9</tpages></addata></record> |
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language | eng |
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source | MEDLINE; SpringerLink Journals - AutoHoldings |
subjects | Adenomatous Polyposis Coli - enzymology Adenomatous Polyposis Coli - genetics Adenomatous Polyposis Coli - pathology Adenomatous Polyposis Coli Protein - genetics Adolescent Adult Aged Alleles Biological and medical sciences Child Female Gastroenterology Gastroenterology. Liver. Pancreas. Abdomen Genetic Predisposition to Disease Group IV Phospholipases A2 - genetics Haplotypes - genetics Hepatology Humans Internal Medicine Male Medical sciences Medicine Medicine & Public Health Middle Aged Mutation - genetics Original Article Phenotype Polymorphism, Single Nucleotide - genetics Proctology Stomach. Duodenum. Small intestine. Colon. Rectum. Anus Surgery Tumors Young Adult |
title | Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis |
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