Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis

Objective Group IVA cytosolic phospholipase A 2 (cPLA 2 α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between cPLA 2 α gene polymorphisms and phenotypic features of patients w...

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Veröffentlicht in:International journal of colorectal disease 2010-03, Vol.25 (3), p.293-301
Hauptverfasser: Umeno, Junji, Matsumoto, Takayuki, Esaki, Motohiro, Kukita, Yoji, Tahira, Tomoko, Yanaru-Fujisawa, Ritsuko, Nakamura, Shotaro, Arima, Hisatomi, Hirahashi, Minako, Hayashi, Kenshi, Iida, Mitsuo
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container_end_page 301
container_issue 3
container_start_page 293
container_title International journal of colorectal disease
container_volume 25
creator Umeno, Junji
Matsumoto, Takayuki
Esaki, Motohiro
Kukita, Yoji
Tahira, Tomoko
Yanaru-Fujisawa, Ritsuko
Nakamura, Shotaro
Arima, Hisatomi
Hirahashi, Minako
Hayashi, Kenshi
Iida, Mitsuo
description Objective Group IVA cytosolic phospholipase A 2 (cPLA 2 α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between cPLA 2 α gene polymorphisms and phenotypic features of patients with familial adenomatous polyposis (FAP). Patients and Methods A tag single nucleotide polymorphisms (SNPs)-based genotype–phenotype association study of the cPLA 2 α gene was conducted in 73 Japanese patients from 59 families with FAP. Based on the HapMap database, seven tag SNPs of the cPLA 2 α gene were selected and genotyped by direct sequencing analysis. The genotype–phenotype association in relation to the adenomatous polyposis coli ( APC ) gene mutation was also assessed. Results The single SNP analysis showed that rs3820185 C allele [odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2–4.9] and rs127446200 GG genotype (OR, 10.9; 95%CI, 1.6–69.8), were more frequent in patients with gastric fundic gland polyposis (FGP) than in those without. Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4; p  = 0.008). This association was also significant when adjusted for covariates (age, sex, and APC mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2; p  = 0.027). Conclusions The cPLA 2 α gene may be a possible disease modifier gene in FAP.
doi_str_mv 10.1007/s00384-009-0808-x
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The aim of this study was to elucidate the possible associations between cPLA 2 α gene polymorphisms and phenotypic features of patients with familial adenomatous polyposis (FAP). Patients and Methods A tag single nucleotide polymorphisms (SNPs)-based genotype–phenotype association study of the cPLA 2 α gene was conducted in 73 Japanese patients from 59 families with FAP. Based on the HapMap database, seven tag SNPs of the cPLA 2 α gene were selected and genotyped by direct sequencing analysis. The genotype–phenotype association in relation to the adenomatous polyposis coli ( APC ) gene mutation was also assessed. Results The single SNP analysis showed that rs3820185 C allele [odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2–4.9] and rs127446200 GG genotype (OR, 10.9; 95%CI, 1.6–69.8), were more frequent in patients with gastric fundic gland polyposis (FGP) than in those without. Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4; p  = 0.008). This association was also significant when adjusted for covariates (age, sex, and APC mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2; p  = 0.027). Conclusions The cPLA 2 α gene may be a possible disease modifier gene in FAP.</description><identifier>ISSN: 0179-1958</identifier><identifier>EISSN: 1432-1262</identifier><identifier>DOI: 10.1007/s00384-009-0808-x</identifier><identifier>PMID: 19795129</identifier><identifier>CODEN: IJCDE6</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Adenomatous Polyposis Coli - enzymology ; Adenomatous Polyposis Coli - genetics ; Adenomatous Polyposis Coli - pathology ; Adenomatous Polyposis Coli Protein - genetics ; Adolescent ; Adult ; Aged ; Alleles ; Biological and medical sciences ; Child ; Female ; Gastroenterology ; Gastroenterology. 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Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4; p  = 0.008). This association was also significant when adjusted for covariates (age, sex, and APC mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2; p  = 0.027). Conclusions The cPLA 2 α gene may be a possible disease modifier gene in FAP.</description><subject>Adenomatous Polyposis Coli - enzymology</subject><subject>Adenomatous Polyposis Coli - genetics</subject><subject>Adenomatous Polyposis Coli - pathology</subject><subject>Adenomatous Polyposis Coli Protein - genetics</subject><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Alleles</subject><subject>Biological and medical sciences</subject><subject>Child</subject><subject>Female</subject><subject>Gastroenterology</subject><subject>Gastroenterology. Liver. Pancreas. 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Anus</topic><topic>Surgery</topic><topic>Tumors</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Umeno, Junji</creatorcontrib><creatorcontrib>Matsumoto, Takayuki</creatorcontrib><creatorcontrib>Esaki, Motohiro</creatorcontrib><creatorcontrib>Kukita, Yoji</creatorcontrib><creatorcontrib>Tahira, Tomoko</creatorcontrib><creatorcontrib>Yanaru-Fujisawa, Ritsuko</creatorcontrib><creatorcontrib>Nakamura, Shotaro</creatorcontrib><creatorcontrib>Arima, Hisatomi</creatorcontrib><creatorcontrib>Hirahashi, Minako</creatorcontrib><creatorcontrib>Hayashi, Kenshi</creatorcontrib><creatorcontrib>Iida, Mitsuo</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of colorectal disease</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Umeno, Junji</au><au>Matsumoto, Takayuki</au><au>Esaki, Motohiro</au><au>Kukita, Yoji</au><au>Tahira, Tomoko</au><au>Yanaru-Fujisawa, Ritsuko</au><au>Nakamura, Shotaro</au><au>Arima, Hisatomi</au><au>Hirahashi, Minako</au><au>Hayashi, Kenshi</au><au>Iida, Mitsuo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis</atitle><jtitle>International journal of colorectal disease</jtitle><stitle>Int J Colorectal Dis</stitle><addtitle>Int J Colorectal Dis</addtitle><date>2010-03</date><risdate>2010</risdate><volume>25</volume><issue>3</issue><spage>293</spage><epage>301</epage><pages>293-301</pages><issn>0179-1958</issn><eissn>1432-1262</eissn><coden>IJCDE6</coden><abstract>Objective Group IVA cytosolic phospholipase A 2 (cPLA 2 α) plays a key role in tumorigenesis via generating arachidonic acids as the substrate of cyclooxygenase. The aim of this study was to elucidate the possible associations between cPLA 2 α gene polymorphisms and phenotypic features of patients with familial adenomatous polyposis (FAP). Patients and Methods A tag single nucleotide polymorphisms (SNPs)-based genotype–phenotype association study of the cPLA 2 α gene was conducted in 73 Japanese patients from 59 families with FAP. Based on the HapMap database, seven tag SNPs of the cPLA 2 α gene were selected and genotyped by direct sequencing analysis. The genotype–phenotype association in relation to the adenomatous polyposis coli ( APC ) gene mutation was also assessed. Results The single SNP analysis showed that rs3820185 C allele [odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2–4.9] and rs127446200 GG genotype (OR, 10.9; 95%CI, 1.6–69.8), were more frequent in patients with gastric fundic gland polyposis (FGP) than in those without. Rs12749354 C allele was more frequently found in patients with small intestinal adenoma (OR, 7.0; 95% CI, 1.5–30.4; p  = 0.008). This association was also significant when adjusted for covariates (age, sex, and APC mutation) in a logistic regression analysis (adjusted OR, 7.4; 95% CI, 1.2–64.2; p  = 0.027). Conclusions The cPLA 2 α gene may be a possible disease modifier gene in FAP.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>19795129</pmid><doi>10.1007/s00384-009-0808-x</doi><tpages>9</tpages></addata></record>
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subjects Adenomatous Polyposis Coli - enzymology
Adenomatous Polyposis Coli - genetics
Adenomatous Polyposis Coli - pathology
Adenomatous Polyposis Coli Protein - genetics
Adolescent
Adult
Aged
Alleles
Biological and medical sciences
Child
Female
Gastroenterology
Gastroenterology. Liver. Pancreas. Abdomen
Genetic Predisposition to Disease
Group IV Phospholipases A2 - genetics
Haplotypes - genetics
Hepatology
Humans
Internal Medicine
Male
Medical sciences
Medicine
Medicine & Public Health
Middle Aged
Mutation - genetics
Original Article
Phenotype
Polymorphism, Single Nucleotide - genetics
Proctology
Stomach. Duodenum. Small intestine. Colon. Rectum. Anus
Surgery
Tumors
Young Adult
title Impact of group IVA cytosolic phospholipase A2 gene polymorphisms on phenotypic features of patients with familial adenomatous polyposis
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