Missing links in the divergence of Chlamydophila abortus from Chlamydophila psittaci
1 Department of Animal Sciences, Katholieke Universiteit Leuven, Kasteelpark Arenberg 21 (Laboratory of Gene Technology) and 30 (Laboratory of Physiology and Immunology of Domestic Animals), 3001 Leuven, Belgium 2 Department of Molecular Biotechnology, Ghent University, Coupure Links 653, 9000 Ghent...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2003-05, Vol.53 (3), p.761-770 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Van Loock, M Vanrompay, D Herrmann, B Vander Stappen, J Volckaert, G Goddeeris, B. M Everett, K. D. E |
| description | 1 Department of Animal Sciences, Katholieke Universiteit Leuven, Kasteelpark Arenberg 21 (Laboratory of Gene Technology) and 30 (Laboratory of Physiology and Immunology of Domestic Animals), 3001 Leuven, Belgium
2 Department of Molecular Biotechnology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
3 Department of Clinical Microbiology, University Hospital, S-751 85 Uppsala, Sweden
4 Department of Microbiology, University of Georgia, Athens, GA 30602, USA
Correspondence D. Vanrompay Daisy.Vanrompay{at}rug.ac.be
Pathological and serological evidence and DNADNA reassociation data indicate that Chlamydophila psittaci and Chlamydophila abortus are separate species. C. psittaci causes avian systemic disease and C. abortus causes abortion. Both previously belonged to Chlamydia psittaci are associated with zoonotic and enzootic outbreaks. Genetic studies suggest that they are closely related and because of the recent availability of diverse C. psittaci strains and comparative data for several genes, it was possible to explore this relationship. The parrot C. psittaci strain 84/2334 was found to have DNA sequences that were identical to an extrachromosomal plasmid in duck C. psittaci strain N352, to rnpB in strain R54 from a brown skua and to the rrn intergenic spacer in parakeet strain Prk/Daruma (from Germany, Antarctica and Japan, respectively). Analysis of ompA and the rrn spacer revealed progressive diversification of the strains, with 84/2334 resembling what might have been a recent ancestor of C. abortus . Another C. psittaci strain (VS225) showed evidence of having undergone convergent evolution towards the C. abortus -like genotype, whereas strain R54 diverged independently. For the first time, these studies link C. abortus in an evolutionary context to the C. psittaci lineage. It has been concluded that C. abortus diverged from C. psittaci , and so strain R54 was designated a C. psittaci strain. It is recommended that characterization of C. psittaci and C. abortus strains should utilize more than a single method and more than a single gene.
Abbreviations: CS, conserved segment; MOMP, major outer-membrane protein; NJ, neighbour-joining; SNP, single nucleotide polymorphism; VS, variable segment
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02329-0.
The GenBank accession numbers for the sequences obtained in this study are AJ310735 AJ310737 and AF481048 AF481052 , as detailed in Figs 2 and 3.
The sequence alignments |
| doi_str_mv | 10.1099/ijs.0.02329-0 |
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2 Department of Molecular Biotechnology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
3 Department of Clinical Microbiology, University Hospital, S-751 85 Uppsala, Sweden
4 Department of Microbiology, University of Georgia, Athens, GA 30602, USA
Correspondence D. Vanrompay Daisy.Vanrompay{at}rug.ac.be
Pathological and serological evidence and DNADNA reassociation data indicate that Chlamydophila psittaci and Chlamydophila abortus are separate species. C. psittaci causes avian systemic disease and C. abortus causes abortion. Both previously belonged to Chlamydia psittaci are associated with zoonotic and enzootic outbreaks. Genetic studies suggest that they are closely related and because of the recent availability of diverse C. psittaci strains and comparative data for several genes, it was possible to explore this relationship. The parrot C. psittaci strain 84/2334 was found to have DNA sequences that were identical to an extrachromosomal plasmid in duck C. psittaci strain N352, to rnpB in strain R54 from a brown skua and to the rrn intergenic spacer in parakeet strain Prk/Daruma (from Germany, Antarctica and Japan, respectively). Analysis of ompA and the rrn spacer revealed progressive diversification of the strains, with 84/2334 resembling what might have been a recent ancestor of C. abortus . Another C. psittaci strain (VS225) showed evidence of having undergone convergent evolution towards the C. abortus -like genotype, whereas strain R54 diverged independently. For the first time, these studies link C. abortus in an evolutionary context to the C. psittaci lineage. It has been concluded that C. abortus diverged from C. psittaci , and so strain R54 was designated a C. psittaci strain. It is recommended that characterization of C. psittaci and C. abortus strains should utilize more than a single method and more than a single gene.
Abbreviations: CS, conserved segment; MOMP, major outer-membrane protein; NJ, neighbour-joining; SNP, single nucleotide polymorphism; VS, variable segment
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02329-0.
The GenBank accession numbers for the sequences obtained in this study are AJ310735 AJ310737 and AF481048 AF481052 , as detailed in Figs 2 and 3.
The sequence alignments used to generate the phylograms shown in Figs 2 and 3 are available as supplementary material in IJSEM Online.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.02329-0</identifier><identifier>PMID: 12807198</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Abortion, Veterinary - microbiology ; Animals ; Bacterial Outer Membrane Proteins - genetics ; Bacterial plant pathogens ; Bacteriology ; Base Sequence ; Biological and medical sciences ; Bird Diseases - microbiology ; Bird Diseases - physiopathology ; Chlamydophila - genetics ; Chlamydophila - pathogenicity ; Chlamydophila Infections - microbiology ; Chlamydophila Infections - physiopathology ; Chlamydophila Infections - veterinary ; Chlamydophila psittaci - genetics ; Chlamydophila psittaci - pathogenicity ; DNA, Ribosomal Spacer - genetics ; Endoribonucleases - genetics ; Evolution, Molecular ; Female ; Fundamental and applied biological sciences. Psychology ; Guinea Pigs ; Mice ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Phylogeny ; Phytopathology. Animal pests. Plant and forest protection ; Plasmids - genetics ; Pregnancy ; Rabbits ; Ribonuclease P ; RNA, Catalytic - genetics ; Sequence Analysis, DNA ; Sheep ; Sheep Diseases - microbiology ; Sheep Diseases - physiopathology ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2003-05, Vol.53 (3), p.761-770</ispartof><rights>2004 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c487t-ba8e25921f5badeac2304b6532249c48cdf6aa148fe04fad70d6c1194f4b47733</citedby><cites>FETCH-LOGICAL-c487t-ba8e25921f5badeac2304b6532249c48cdf6aa148fe04fad70d6c1194f4b47733</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,781,785,3747,3748,27928,27929</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=14805761$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12807198$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Van Loock, M</creatorcontrib><creatorcontrib>Vanrompay, D</creatorcontrib><creatorcontrib>Herrmann, B</creatorcontrib><creatorcontrib>Vander Stappen, J</creatorcontrib><creatorcontrib>Volckaert, G</creatorcontrib><creatorcontrib>Goddeeris, B. M</creatorcontrib><creatorcontrib>Everett, K. D. E</creatorcontrib><title>Missing links in the divergence of Chlamydophila abortus from Chlamydophila psittaci</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Department of Animal Sciences, Katholieke Universiteit Leuven, Kasteelpark Arenberg 21 (Laboratory of Gene Technology) and 30 (Laboratory of Physiology and Immunology of Domestic Animals), 3001 Leuven, Belgium
2 Department of Molecular Biotechnology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
3 Department of Clinical Microbiology, University Hospital, S-751 85 Uppsala, Sweden
4 Department of Microbiology, University of Georgia, Athens, GA 30602, USA
Correspondence D. Vanrompay Daisy.Vanrompay{at}rug.ac.be
Pathological and serological evidence and DNADNA reassociation data indicate that Chlamydophila psittaci and Chlamydophila abortus are separate species. C. psittaci causes avian systemic disease and C. abortus causes abortion. Both previously belonged to Chlamydia psittaci are associated with zoonotic and enzootic outbreaks. Genetic studies suggest that they are closely related and because of the recent availability of diverse C. psittaci strains and comparative data for several genes, it was possible to explore this relationship. The parrot C. psittaci strain 84/2334 was found to have DNA sequences that were identical to an extrachromosomal plasmid in duck C. psittaci strain N352, to rnpB in strain R54 from a brown skua and to the rrn intergenic spacer in parakeet strain Prk/Daruma (from Germany, Antarctica and Japan, respectively). Analysis of ompA and the rrn spacer revealed progressive diversification of the strains, with 84/2334 resembling what might have been a recent ancestor of C. abortus . Another C. psittaci strain (VS225) showed evidence of having undergone convergent evolution towards the C. abortus -like genotype, whereas strain R54 diverged independently. For the first time, these studies link C. abortus in an evolutionary context to the C. psittaci lineage. It has been concluded that C. abortus diverged from C. psittaci , and so strain R54 was designated a C. psittaci strain. It is recommended that characterization of C. psittaci and C. abortus strains should utilize more than a single method and more than a single gene.
Abbreviations: CS, conserved segment; MOMP, major outer-membrane protein; NJ, neighbour-joining; SNP, single nucleotide polymorphism; VS, variable segment
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02329-0.
The GenBank accession numbers for the sequences obtained in this study are AJ310735 AJ310737 and AF481048 AF481052 , as detailed in Figs 2 and 3.
The sequence alignments used to generate the phylograms shown in Figs 2 and 3 are available as supplementary material in IJSEM Online.</description><subject>Abortion, Veterinary - microbiology</subject><subject>Animals</subject><subject>Bacterial Outer Membrane Proteins - genetics</subject><subject>Bacterial plant pathogens</subject><subject>Bacteriology</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Bird Diseases - microbiology</subject><subject>Bird Diseases - physiopathology</subject><subject>Chlamydophila - genetics</subject><subject>Chlamydophila - pathogenicity</subject><subject>Chlamydophila Infections - microbiology</subject><subject>Chlamydophila Infections - physiopathology</subject><subject>Chlamydophila Infections - veterinary</subject><subject>Chlamydophila psittaci - genetics</subject><subject>Chlamydophila psittaci - pathogenicity</subject><subject>DNA, Ribosomal Spacer - genetics</subject><subject>Endoribonucleases - genetics</subject><subject>Evolution, Molecular</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Guinea Pigs</subject><subject>Mice</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Phytopathology. Animal pests. Plant and forest protection</subject><subject>Plasmids - genetics</subject><subject>Pregnancy</subject><subject>Rabbits</subject><subject>Ribonuclease P</subject><subject>RNA, Catalytic - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Sheep</subject><subject>Sheep Diseases - microbiology</subject><subject>Sheep Diseases - physiopathology</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0M1PwyAYBnBiNG5Oj15NL-qp84VSSo9m8SvReJlnQimszH5MaDX772VucYkXTxD45XnfPAidY5hiyPMbu_RTmAJJSB7DARpjylicQkIPf--EjdCJ90uA8ABwjEaYcMhwzsdo_mK9t-0iqm377iPbRn2lo9J-arfQrdJRZ6JZVctmXXarytYykkXn-sFHxnXNn6-Vt30vlT1FR0bWXp_tzgl6u7-bzx7j59eHp9ntc6woz_q4kFyTNCfYpIUstVQkAVqwNCGE5oGo0jApMeVGAzWyzKBkCuOcGlrQLEuSCbra5q5c9zFo34vGeqXrWra6G7wIJOM4Zf9CzDlmECInKN5C5TrvnTZi5Wwj3VpgEJu-RehbgPjpW0DwF7vgoWh0ude7ggO43AHplayNk62yfu8ohzRjOLjrravsovqyTotQf2PDGoXtNkPTRCRiI78BG-2XJg</recordid><startdate>20030501</startdate><enddate>20030501</enddate><creator>Van Loock, M</creator><creator>Vanrompay, D</creator><creator>Herrmann, B</creator><creator>Vander Stappen, J</creator><creator>Volckaert, G</creator><creator>Goddeeris, B. M</creator><creator>Everett, K. D. E</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20030501</creationdate><title>Missing links in the divergence of Chlamydophila abortus from Chlamydophila psittaci</title><author>Van Loock, M ; Vanrompay, D ; Herrmann, B ; Vander Stappen, J ; Volckaert, G ; Goddeeris, B. M ; Everett, K. D. 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Psychology</topic><topic>Guinea Pigs</topic><topic>Mice</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Phytopathology. Animal pests. Plant and forest protection</topic><topic>Plasmids - genetics</topic><topic>Pregnancy</topic><topic>Rabbits</topic><topic>Ribonuclease P</topic><topic>RNA, Catalytic - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Sheep</topic><topic>Sheep Diseases - microbiology</topic><topic>Sheep Diseases - physiopathology</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Van Loock, M</creatorcontrib><creatorcontrib>Vanrompay, D</creatorcontrib><creatorcontrib>Herrmann, B</creatorcontrib><creatorcontrib>Vander Stappen, J</creatorcontrib><creatorcontrib>Volckaert, G</creatorcontrib><creatorcontrib>Goddeeris, B. M</creatorcontrib><creatorcontrib>Everett, K. D. 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M</au><au>Everett, K. D. E</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Missing links in the divergence of Chlamydophila abortus from Chlamydophila psittaci</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2003-05-01</date><risdate>2003</risdate><volume>53</volume><issue>3</issue><spage>761</spage><epage>770</epage><pages>761-770</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Department of Animal Sciences, Katholieke Universiteit Leuven, Kasteelpark Arenberg 21 (Laboratory of Gene Technology) and 30 (Laboratory of Physiology and Immunology of Domestic Animals), 3001 Leuven, Belgium
2 Department of Molecular Biotechnology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
3 Department of Clinical Microbiology, University Hospital, S-751 85 Uppsala, Sweden
4 Department of Microbiology, University of Georgia, Athens, GA 30602, USA
Correspondence D. Vanrompay Daisy.Vanrompay{at}rug.ac.be
Pathological and serological evidence and DNADNA reassociation data indicate that Chlamydophila psittaci and Chlamydophila abortus are separate species. C. psittaci causes avian systemic disease and C. abortus causes abortion. Both previously belonged to Chlamydia psittaci are associated with zoonotic and enzootic outbreaks. Genetic studies suggest that they are closely related and because of the recent availability of diverse C. psittaci strains and comparative data for several genes, it was possible to explore this relationship. The parrot C. psittaci strain 84/2334 was found to have DNA sequences that were identical to an extrachromosomal plasmid in duck C. psittaci strain N352, to rnpB in strain R54 from a brown skua and to the rrn intergenic spacer in parakeet strain Prk/Daruma (from Germany, Antarctica and Japan, respectively). Analysis of ompA and the rrn spacer revealed progressive diversification of the strains, with 84/2334 resembling what might have been a recent ancestor of C. abortus . Another C. psittaci strain (VS225) showed evidence of having undergone convergent evolution towards the C. abortus -like genotype, whereas strain R54 diverged independently. For the first time, these studies link C. abortus in an evolutionary context to the C. psittaci lineage. It has been concluded that C. abortus diverged from C. psittaci , and so strain R54 was designated a C. psittaci strain. It is recommended that characterization of C. psittaci and C. abortus strains should utilize more than a single method and more than a single gene.
Abbreviations: CS, conserved segment; MOMP, major outer-membrane protein; NJ, neighbour-joining; SNP, single nucleotide polymorphism; VS, variable segment
Published online ahead of print on 7 February 2003 as DOI 10.1099/ijs.0.02329-0.
The GenBank accession numbers for the sequences obtained in this study are AJ310735 AJ310737 and AF481048 AF481052 , as detailed in Figs 2 and 3.
The sequence alignments used to generate the phylograms shown in Figs 2 and 3 are available as supplementary material in IJSEM Online.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>12807198</pmid><doi>10.1099/ijs.0.02329-0</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | International journal of systematic and evolutionary microbiology, 2003-05, Vol.53 (3), p.761-770 |
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| source | MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
| subjects | Abortion, Veterinary - microbiology Animals Bacterial Outer Membrane Proteins - genetics Bacterial plant pathogens Bacteriology Base Sequence Biological and medical sciences Bird Diseases - microbiology Bird Diseases - physiopathology Chlamydophila - genetics Chlamydophila - pathogenicity Chlamydophila Infections - microbiology Chlamydophila Infections - physiopathology Chlamydophila Infections - veterinary Chlamydophila psittaci - genetics Chlamydophila psittaci - pathogenicity DNA, Ribosomal Spacer - genetics Endoribonucleases - genetics Evolution, Molecular Female Fundamental and applied biological sciences. Psychology Guinea Pigs Mice Microbiology Miscellaneous Molecular Sequence Data Phylogeny Phytopathology. Animal pests. Plant and forest protection Plasmids - genetics Pregnancy Rabbits Ribonuclease P RNA, Catalytic - genetics Sequence Analysis, DNA Sheep Sheep Diseases - microbiology Sheep Diseases - physiopathology Systematics |
| title | Missing links in the divergence of Chlamydophila abortus from Chlamydophila psittaci |
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